Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      ===================================MYC_MYB                                                 --------->MYB52(1)                                                ----------->HVH21                                               ------>ZmHOX2a(2)                                              <------ZmHOX2a(2)                                             <---------AGP1                                             --------->AGP1                  ========================                                             --------->ARR11(3)              <---------TGA1a                                             <---------ARR11(3)              --------->TGA1a                                        --------->TOE1(3)                    <---------O2                                        --------->TOE1(2)                    --------->O2                                   --------->ANAC58 ------->GAMYB          <---------ALFIN1                                   <---------MYB52(2)                    ------->GAMYB                                   --------->MYB46(3)   <------NtERF2    ==============MYC_MYB      -                           --------->ICU4   <---------CCA1(2)           --------->ANAC46           --                      ----------->GT1   --------->TOE2(3)          <-----------GT1    ------>ZmHOX2a(1)                   --------->MYB52(1) ------->TEIL--------->RAP2.6(3)   --------->ANAC58         ----                  ---------->DOF2  --------->ANAC58--------->MYB46(3)   --------->ANAC58     --------   aaactgttgaacatataaaccaaagggaaattatcgaacgaaccttagatctaacggcctcagacagtttcacaacgccacttgactcctcaaatccatc  5443300                           ------>NtERF2                          --------->RAP2.3(2)                          --------->RAP2.6(2)                        ------>NtERF2                       --------->DEAR3(1)                       --------->DREB2C(2)                       --------->AtMYB61                       ------->GAMYB                      --------->DEAR3(2)                    --------->AtMYB61                    <---------ALFIN1                   --------->MYB46(3)        --------->At4g35610              <---------ALFIN1               ------>NtERF2              --------->DREB2C(2)            <---------At4g35610              --------->DEAR3(1)            --------->RAP2.3(2)             --------->ORA47(2)            --------->DEAR4(2)          --------->At4g35610              --------->ORA47(2)          <---------ABI4(2)<---------At4g35610          --------->ZAT2--------->ABI4(1)  <------NtERF2       --------->At4g35610--------->RRTF1(3)<---------ALFIN1                            --------->GLK1(1)       --------->ZAT2<---------ATERF1(1)   --------->ATERF1(1)               <-------MYC3       <---------At4g35610--------->DEAR3(1)<---------ATERF1(1)  --------->ALFIN1       <---------GLK1(1)      ----------->RAV1(1)--------->RAP2.3(1)--------->DEAR3(1) <---------ANAC58        --------->ARR11(3)    <---------At4g35610--------->ANAC46    --------->RAP2.3(1) <---------ANAC58        <---------ARR11(3)    --------->At4g35610<---------ALFIN1   <---------RRTF1(1)   <---------MYB46(3)    <---------YAB1    <---------ZAT2<---------ATERF1(1)     ------>NtERF2        <---------ANAC46    --------->YAB1    <------NtERF2--------->DEAR3(1)       <---------RAP2.3(1) --------->ALFIN1   <---------ARR11(1)    --------->ZAT2------>NtERF2          <---------ANAC58     <---------AtMYB61 <---------CCA1(2)   ----------->RAV1(1)--------->MYB46(3) <---------RAP2.3(2) <-----------HVH21--------->ANAC55(2) =======MYC_MYB<---------ATERF1(1)       <---------ANAC58   <---------ANAC46 ------->MYC3 ------>GAMYB--------->DEAR4(2)        <---------ATERF1(1)  <---------PCF2   ------->MYC2------>ZmHOX2a(2) ------->ANAC46--------->ABI4(1)      --------->ALFIN1   --------->ALFIN1    <-------MYC2============ ----->MYB52(1)------>NtERF2   ---------->DOF2       ---------->DOF2        --------->ANAC58        - ->WOX13(1)<---------ALFIN1--------->At4g35610     --------->AtLEC2         --------->ANAC58        -   aacggcagcagcagcaccgcctccaccgccgctaaaagaggttgcgccgctccatgaaagtggggtcgtgggactagcacgcgtatcatgatctcccttc  5443400                                                                    ------>NtERF2                                                                  --------->RAP2.3(1)                                                                  --------->DEAR4(2)                                                                  <------NtERF2                                                                  --------->ATERF1(1)                                                                 --------->ABI4(1)                                                                 <---------RAP2.3(1)                                                                <---------ALFIN1                                                                --------->RAP2.3(3)                                                                --------->ATERF1(2)                                                                --------->RAP2.3(2)                                                                --------->RRTF1(3)                                                                --------->RRTF1(2)                                                                <---------ATERF1(2)                                                                <---------DEAR3(1)                                                                --------->DEAR3(1)                                                               --------->ERF1                                                               --------->ORA47(2)                                                               --------->RAP2.3(1)                                                               --------->DEAR4(2)                                                               --------->DEAR3(2)             <------NtERF2                                     --------->RRTF1(1)            ------>NtERF2                                      <------NtERF2           --------->RAP2.3(3)                                 --------->ATERF1(1)           --------->RAP2.3(2)                                 --------->RAP2.6(1)           --------->DEAR3(1)                                 ------>NtERF2           --------->RAP2.6(2)                                <---------ATERF1(1)                <---          --------->DEAR4(2)                                 --------->ANAC58                   <----          --------->ATERF1(1)       --------->ANAC46         --------->ANAC58                 -------          --------->RAP2.3(1)     --------->ANAC58           <---------DEAR3(1)           <<<<<<<<<AtERF-3          --------->ORA47(2)      --------->ANAC46           --------->ANAC46             <<<<<<<<<AtERF-4          <------NtERF2           --------->ANAC58          <---------ABI4(2)             ------>NtERF2          --------->ERF1         ------->TEIL           ----------->HVH21                 <---------RAP2.3(1)         <---------ATERF1(1)    <---------ALFIN1       ==================================HOX2a_HOX2a         <---------RAP2.3(1)   <---------SPL7          ------>ZmHOX2a(2)                 <---------DEAR3(1)         ------>NtERF2        --------->ANAC58        ===================================HOX2a_HOX2a        --------->DEAR3(1)    --------->ANAC58        <------ZmHOX2a(2)                  <---------RAP2.6(2)        <---------DEAR3(1)  <---------TGA2(2)         --------->CCA1(2)                  <---------RAP2.3(3)      <-----------TGA1     ----------->HVH21         <---------ARR14(2)                  <---------RAP2.3(2)      <-----------HVH21  ----------->RAV1(2)         --------->ARR14(2)           <------ZmHOX2a(1)     --------->ANAC46    --------->ZAT2              --------->AGP1--------->DEAR3(1)   --------->RAP2.6(3)   <---------DOF5.7(2)   --------->At4g35610        <---------GLK1(1) <----------DOF2  --------->MYB52(1) ------>ZmHOX2a(1)       <---------At4g35610  --------->At4g35610------>NtERF2    =================== =======HOX2a_HOX2a      <---------ZAT2       <---------At4g35610<---------ATERF1(1)  ----------->HVH21 -------->TOE1(3)      <---------DEAR3(1)--------->ANAC46   ------>NtERF2      <-----------RAV1(2) -------->TOE2(3)     ------>ZmHOX2a(1)<---------ALFIN1--------->DEAR3(2)      <---------LBD16-------   ttccttaacgtcgccgccttggtcctcggctgacgcacgctccacttcagcttgagatccgacgcgccgccgctcttcgtctcaggaagtgacggctcgg  5443500                           <---------MYB52(2)                       --------->LBD16                                 <-----------HVH21                       ------>NtERF2                                 --------->DEAR3(1)                      --------->ANAC58                             ------>NtERF2                      --------->ANAC58                            --------->DEAR3(1)                      --------->ANAC46                            --------->ANAC46    <------ZmHOX2a(1) --------->DEAR3(1)                         <---------LBD16             ------>MYB83    ===============HOX2a_HOX2a      <---------ICU4               --------->ATERF1(1)         ------>MYB46(1) ------AtLEC2       <---------ATERF1(1)                 <---------ARR14(2)             <------MYB46(1) --NtERF2          --------->DEAR3(1)                   --------->ARR14(2)             <------MYB83 -->ANAC58  <------ZmHOX2a(2)       --------->YAB1 <---------O2 <---------ATERF1(1)  <--------P  ---- ==================HOX2a_HOX2a    ------->TEIL     <---------ANAC46--------->LBD16<---------TOE2(3) -->ANAC58 <-----------HVH21   <---------ATHB12    --------->O2--------->ARR14(2) <---------TOE1(3)   catggaggagacagatcagagcctccgccactaatgaatcatcacccatagcctcgtgaatccagtctccgccggtcatagtctgaggttggaccttcca  5443600                                                                         --------->LBD16                                                                        <---------ANAC58                                                                        <---------ANAC58                                                                        <---------O2                                                                        <---------TGA1a                                                                        --------->O2                                                  --------->ALFIN1<---------ARR11(3)                                               --------->DAG2     --------->ARR11(3)                -                                              ---------->DOF2    --------->RVE1(1)                 <-                                           <---------ANAC46      --------->CCA1(1)              <----                                          <------NtERF2    ----------->GT1     *TSS   <---------MYB46(3)                            <------ZmHOX2a(1) ====================================bZIP_DOF      <---- ----->ANAC46      ---------->DOF2      <---------DEAR3(1)>>>>>>>>>TBF1 --------->TGA1a<---------ANAC46   ccgaatttagatagagagagagaaagagaaggagaagaaatggtggcgaaaagtggagaagaagaaaaaatctcccgtggcacattaatgggtggatttt  5443700                                                                                       --------->PCF2        <---------TOE2(3)                        <---------AHL20(2)     <---------ANAC58       <-----------GT1                       <---------YAB1             <---------ANAC58  ----------->TBP                          <---------AHL20(2)        ================================ <---------AHL20(2)                        --------->AHL20(2)     <-----------GT1      <---------TCP15(1) -------->AHL20(2)                 ----------->GT1                <---------AHL20(2)  --------->TCP20 --------YAB1                    <------------CBF--------->AHL20(2)  <----------DOF2  <---------PCF2 -----YAB1              ----------->GT1   <---------AHL20(2) <---------AHL20(2)       --------->TCP15(1) -----AHL20(2)        <-------TEIL<---------WOX13(1)       <----------DOF2         --------->ALFIN1   tattatatataacgttttcacacatacagttattagattgaaaaattatttttaaatctgtcttttattttctttcttggtgagagtgggacccatggga  5443800                                                                              ----------->HVH21                                                                            --------->MYB52(2)                                                                          <---------MYB52(1)         <---------ANAC46                                                 <--------P    --------->O2                                                         <-------GAMYB            ---    --------->ANAC55(2)                                               --------->LBD16             ---    <---------ANAC58                                                 ------------>AtMYB77       <----    <---------ANAC55(2)                                             ------->MYC3                <----    ================================bZIP_DOF                        ------->MYC2                <----    <---------TGA1a                                                 <-------MYC3  --------->ARR11(3)    --------->TGA1a                                                 <-------MYC2  <---------ARR11(3)    <---------O2                                       <---------ANAC58  --------->At5g28300    <----    <---------ANAC58                                   <---------ANAC58 <---------MYB46(3)  <--------   <-------TEIL                                    <--------P      --------->ANAC46         <-------- --------->TOE2(2)            <---------ZAT18    <---------ZAT6    --------->ANAC58         <-------- =============bZIP_DOF   <----------DOF2        <---------TOE2(3)  --------->ANAC58  <----------DOF2   atacatacgtggcatatagtatttgtactttgtgcaattgcaaaggtactagggttagcgtctgaatacacgcgcggttagtgacatctttatggcttgc  5443900                                                                      <---------ICU4       ----------->GT1                                               --------->ICU4     <-------TEIL                                                    <---------YAB1  <---------DEAR3(2)                                                --------->KAN4(2) -------->HVH21                                                 <---------bZIP60(1)                 < ------>ALFIN1                           <---------HSFB2a(2)    --------->bZIP60(1)                 - -----ANAC46                            <---------LBD16    --------->ALFIN1               <---------ANAC58 -----ANAC58                            <---------ANAC46 <---------ANAC58                 <---------ANAC58 -----ANAC55(1)                        <---------LBD16   --------->TGA1a                 ------------ -----ANAC58                         <---------ARR14(2)  <---------ANAC46                ------------ -ANAC58                             --------->ARR14(2)  <---------ANAC58  <---------ANAC58        -- -ANAC58       <-------TEIL --------->YAB1               <---------TGA1a   <---------ANAC58  -------- -ANAC46   <-------TEIL    <---------YAB1--------->HSFB2a(2)<-----------HVH21     --------->YAB1   <-   gtgccggttcagttacatccattactcttatcatatgcagtttcgggataaatttgtggacgtgtgaggtcattcttacttgaatcacattttcgtactt  5444000                                            --------->ANAC58                                            --------->ANAC58 ---------ICU4                      --------->DAG2 -------->ATHB12                   ---------->DOF2   <------ZmHOX2a(1)          <---------TOE2(3) --->AtSPL8                     <------ZmHOX2a(1)   <---------YAB1              <---------ANAC55(2) --->AtSPL3            ----------------->AGL1    --------->ICU4          --------->AHL20(2) ------->ICU4          <---------ANAC58     --------->ANAC46             <---------AHL20(2) ->SPL7                <---------ANAC58     --------->ANAC55(2)       ------->TEIL --------YAB1          <---------ANAC46   <-----------GT1          --------->ANAC55(2)   catgattgtagatagatgccatattgcctatgtaggataaagttttacgaaattaggattagttaacttatgtatttatattaagtatgcattgaactcg  5444100                                    --------->AHL20(2)                                    <---------AHL20(1)                                    --------->AHL20(1)                                    <---------AHL20(2)                                <---------YAB1                               <---------AHL20(1)                               --------->AHL20(1)                               <---------AHL20(2)                               --------->AHL20(2)        <----------DOF2       --------->YAB1                <---------At5g28300      ---------->ID1   ----------->GT1          --------->YAB1       --------->YAB1  <----------DOF2   <------ZmHOX2a(1)<---------AHL20(2)    <-----------GT1                     <-----   ttttctttttcttttttggctaggattgaaaattataatttaatgtccattcatacagtatttactgtccataatactccaaaaatttgaaacaaattat  5444200  Previous    Next  AGI:  At1g15800.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G80610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44296.1) Range:  from: 5441077    to: 5443679    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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