Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <---------ANAC58                                                    <---------ANAC46                                        ----------->RAV1(1)                                        ------>MYB83<---------ANAC58                                        ------>MYB46(1)                                       --------->ANAC46                                      --------->MYB46(3)                                      <---------MYB59                                     --------->ANAC58            <---------ARR14(2)                              --------->GLK1(1)  <---------RAP2.6(2)   ---------->DOF2   ---------->DOF2<------MYB46(1)    --------->ANAC58            --------->ARR14(2)         <-------- ->DAG2           <------MYB83<---------GLK1(1)<-----------RAV1(1) --------->MYB52(1)    <-----------RAV1(1) >DOF2         <------ZmHOX2a(1)     --------->ANAC46     <----------DOF2         <----------DOF2   gatataaaagagtatcaggaaggtatacatggatttcatacccaacatattgtggcttagctttacagataccgaaagtcagttcttttccatgttgtgg  5435500                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                   <-                                    --------->ANAC46           ----------->RAV1(2)             ------                                    --------->ANAC58         <-----------GT1                   <-----                                    --------->ANAC58      --------->YAB1       --------->At4g35610 --                                   <---------TOE2(3)      <---------ICU4       <---------At4g35610 <-                                  --------->MYB52(1)     <---------YAB1       --------->DEAR3(1)  <--                          <---------At5g28300          --------->YAB1     --------->ZAT18<-----------GT1 -ANAC46                 <-----------GT1              <-------TEIL        <---------ABI4(2)    ------   agtccattgcctcacaaatctctatatttaccatactaacgaaacaagaatatatgttcataataacctggttaagagcaccgctgaaaattttctcctc  5435600    <---------ZAT2    <---------At4g35610    --------->ZAT2    --------->At4g35610 ------->GLK1(2)                                        <-------TEIL ------->ARR14(2)        <---------MYB52(1)          <---------HSFC1(2) ----------ARR10       ----------->GT1               <------MYB83 --------ARR11(1)   --------->ZAT2                   --------->HSFB2a(1) --->HSFB2a(2)      <---------At4g35610              <------MYB46(1) ----HSFB2a(2)      <---------ZAT2        --------->LBD16            <-----------GT1 ----->TEIL      --------->LBD16         <---------HSFB2a(2)      <---------ZAT6          --------->ANAC58 --------ARR14(2)------>ZmHOX2a(1)       --------->HSFB2a(2) <----------DOF2              --------->ANAC58 -------CCA1(2)<---------LBD16          <---------LBD16--------->ALFIN1        --------->ANAC46   <-- >ZmHOX2a(1)   ----------->RAV1(2)----------->RAV1(2)<---------HSFB2a(1)      <---------LBD16     ---   gaatctagctgcaattctcctgagctcgttaattccctctggtccggaaaatggaaggtgcttctttagtgtttccattctgcgcaagtggcaagcaaat  5435700                           --------->ANAC58                           --------->ANAC58                         <---------WRKY12                         <---------WRKY38(1)                        --------->WRKY18(1)                                          ------>NtERF2                       <-----------HVH21                                           --------->RAP2.3(1)               --------->MYB52(1)                                                 ------->GAMYB<----- -------ANAC55(2) --------->ATHB12    <-----------GT1                            --------->DEAR3(1) - -------->GT1<---------MYB52(2)    --------->YAB1                                --------->ANAC46  --   aagtaaaacaaacaaactaactattggtcaaggaacataataaccttctatttctgtagtatttgactggcatagacaaaacaacgccgctagagtgact  5435800                            <-----------RAV1(2)                          --------->GLK1(2)                  ----------->HVH21                --------->At4g35610              ------>ZmHOX2a(2)             <------ZmHOX2a(2)            XXXXXXXXXXXXXXXXXXXX>MIR398A            --------->ARR11(3)           <---------ANAC58  --------->ARR14(2)            <---------ARR14(2)           <---------ANAC58  ------->TEIL            <---------ARR11(3)  --------->ALFIN1      --------->At4g35610            --------->ARR14(2)--------->At4g35610     <---------At4g35610            <---------ARR14(3)--------->ZAT2          ----------->RAV1(2) ----ANAC46 --------->ARR14(3)<---------O2XXXXXXXXXXXXXXXXXXXX>MIR398B/C -------->ARR11(3)----------->TGA1<------NtERF2   <-----------HVH21     <---------GLK1(1)           - ------->REM1(1)----------->RAV1(2)      <---------ANAC46 <---------CCA1(2)   <---------MYB52(1)    -   tacatcttgttgacgatcttctgacgagaatcaggtggcaattgcgttctccagtcacctgtatccatggcaggctctccgtttggaagagaaggcctcc  5435900          --------->WOX13(1)       <-----------GT1               --------->AtLEC2                                      <---------     <---------YAB1             --------->ANAC46               --------->ZAT14           --------->AHL20(2)  <---------YAB1                --------->ANAC58               <---------ZAT14      ------------>CBF -------->YAB1                  --------->ANAC58        --------->YAB1          <---------ICU4 ---------->GT1             <-----------GT1        ------------>CBF        --------->AtMYB61 --------   aattgttattatccatcaagttttctgtgtttacaagccatgaagagcaaagtatcaatagtaagtatacagagaaaccaaaacatgacaatataacaac  5436000                               --------->ANAC58                               --------->ANAC58                 <------ZmHOX2a(1)                --------->ANAC46                                                                 <---                ----------->GT1--------->ANAC46           <---------GLK1(2)                   <------                --------->ANAC58                       --------->YAB1     --------->At4g35610 ------- --GT1    <---------ATHB12<-----------GT1          --------->ZAT6 <------------CBF           <------- ->MYB46(3)     --------->ANAC58 --------->ANAC46<-----------GT1<---------YAB1      <-------TEIL<----   tgattatcccaaatcaacaggaaacaaatgaccacacaacatggattagattaacactcagaatttcttattgatcagccaaaatgttcattctttctaa  5436100            ------------>CBF           --------->ANAC58           --------->ANAC58          --------->DAG2         ---------->DOF2 <------MYB83                                            <---------ARR14(2) <------MYB46(1)                                         --------->GLK1(2) <---------MYB46(3)                             --------->LBD16                           --------->TOE2(3) --------RAV1(1)                              <---------LBD16    --------->GLK1(1)     <-----------GT1 ---------AGL15                             <---------ALFIN1 --------->LBD16       XXXXXXXXXXXXXXXXXX -------->AGL15                         <---------ARR14(2)  <---------LBD16--------->ANAC58 ----------AGL2                      ------------>CBF    --------->ARR14(2)--------->ANAC58     ----- -----TOE2(3)               --------->TOE2(3)--------->MYB52(1)<------ZmHOX2a(1)  <----------DOF2   tgttggtagcaaaaagcaataaactcaaaacatcaaatagccaatcccaccggaacgagaatccaggaactcaaaataagcaaactttattacatcaaca  5436200                                                              <----------DOF2                                                     <---------DAG2                                   ------>MYB83----------->ARR10                         <-----------GT1 ---------->DOF2<---------ARR11(3)                      -----                    <---------YAB1 ------>MYB46(1)   <----------DOF2          ---------->DOF2   -----                  --------->YAB1--------->ANAC58 <---------ARR14(2)         --------->YAB1     ------ <-------TEIL     ----------->GT1<---------MYB59 <---------ARR11(3)        <------ZmHOX2a(2)  ------- XX>MIR3932A/B  <------------CBF--------->ANAC58 --------->ARR14(2)     --------->LBD16  ------------ ----->DOF2 --------->ANAC55(2) --------->ANAC46 --------->ARR11(3) <---------GLK1(1)    <-----------   aagttcatctattctcgtaattgtaataaaccagacccaactacaaagggagatactttatcttctttggaatcccgatcaaaagagaaaactctaaaaa  5436300                                                                                                <----                                                                                                <----                                                                                               ------                                                                                               ------                                                                                  <---------LBD16                                                                            <---------ANAC58   ------                                          <-----------GT1                   <---------ANAC58   ------                                     --------->HSFB2a(1)                    <---------ANAC46   <----- ---->ANAC58                    <-------TEIL --------->TOE2(3)         --------->CCA1(2)       <----- ---->ANAC58                   --------->GLK1(2)                      --------->ARR14(2)      <------ --->DAG2      ------->GAMYB  --------->ARR14(2)                      <---------ARR14(2)   <---------TOE2(3) --->DOF2      ----------->GT1<---------ARR14(2)                    ----------->ARR10   --------->WRKY18(1) --->AGL15  ----------->RAV1(1)--------->CCA1(2)              <---------ATHB12  ----------->HVH21 ----AGL15  --------->MYB52(1)<---------GLK1(2)             --------->WOX13(1)<-------GAMYB<---------TOE1(3)   gcaaggcttaagaacaacagaaaaaaaaacgagattcgaacatttcacctcaaattcagagccaatcaaggagatttggcgtttgacggagtcaaggttg  5436400  Previous    Next  AGI:  At1g15780.1    Description:  protein binding / transcription cofactor. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G10440.1); similar to CTV.22 [Poncirus trifoliata] (GB:AAN62354.1); contains InterPro domain Coactivator CBP, KIX; (InterPro:IPR003101) Range:  from: 5430178    to: 5435916    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version