Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        ----------->GT1                                                      <------MYB46(1)                                                      <------MYB83                                                     --------->MYB59   <-----------GT1                          <---------AHL20(1)      --------->ARR14(2)  --------->KAN4(2)           <--                          <---------ARR11(3)      <---------ARR14(2) <---------KAN4(1)            ---                          --------->AHL20(1)   --------------->AGL15 --------->KAN4(1)          <----                   <---------AHL20(2)          <---------------AGL15 <----------TaMYB80     ---------                  <---------AHL20(2)          --------->ANAC46  --------->YAB1    <------ZmHOX2a(2)                  --------->AHL20(2)          <-----------------AG  <---------KAN4(2)--------->At4g35610       <------ZmHOX2a(1)  --------->ARR11(3)  <-----------------AGL1---------->TaMYB80     <---------ATHB12   tgtaaaataggaagagagaattaaatgatatattttagaccaaaatacacccgatttggtaaatactcagaatataccatatggatcagataaatcataa  5398600               <---------AHL20(2)              --------->AHL20(2)              <---------AHL20(2)              <---------AHL20(1)                                                      ----------->GT1      ------>MYB46(1)                                                                ------>NtERF2      --------->MYB52(1)                                                         ----------->HVH21    <---------MYB111(2)                                                         --------->DEAR3(2)    <---------MYB59                                                           --------->ARR14(2)    <---------MYB111(1)                                                       <---------ARR14(2)    <---------MYB46(2)                                           --------->YAB1<------ZmHOX2a(2)   --------->ANAC55(2)                                           <---------ICU4--------->CCA1(2)   <---------At4g35610                                          <---------ATHB12------>ZmHOX2a(2)   --------->ANAC46                                           --------->YAB1  --------->AGP1  ------- -------ICU4 <---------AHL20(2)                              --------->ICU4   <---------ARR11(3) ---- ------>YAB1 --------->AHL20(2)                       ---------->DOF2      --------->HSFB2a(2)------- -----ARR11(3)--------->AHL20(1)     <---------WOX13(1)--------->DAG2      <---------HSFB2a(2)------- >YAB1------>MYB83         --------->ANAC46        --------->ANAC46   ------->TEIL  <---------DEAR3(1)   tcttcacctaactaaattaattttctaccacgaagggggattgactacaaaacccgaaaagtactaatcatgtacttccagatccgacggctaaaaacgc  5398700                                                                                    ------->GAMYB                                                                                    --------->MYB55(1)                                                                                   <---------MYB55(2)                                                                                   <---------MYB111(2)                                                                                   <---------MYB52(2)                                                                             <---------ETT(1)                                                                             ----------->HVH21                                                                       <---------ANAC58                                                                       <---------bZIP60(2)                                                                       <---------TGA1a                                                                       <---------ANAC58                                                                       <---------O2--------->MYB46(3)        --------->ANAC58                                               =====================MYC_MYB        --------->ANAC55(2)                                            <---------ANAC46        --------->ANAC46                                             <-----------HVH21<---------LBD16        --------->ANAC58                                          <---------At4g35610-------->P        <---------ANAC55(2)                                       --------->At4g35610--------->MYB52(1)  <------ZmHOX2a(2)  <----------DOF2   ------->GAMYB           ==================bZIP_DOF          <- -->ANAC58     <------MYB83            ==========================================MYC_MYB--------->LBD16 --->TEIL      <------MYB46(1)        --------->MYB46(3)  <----------DOF2 <-----------HVH21      <--- -->ANAC46    --------->MYB111(1)   --------->MYB52(1)    =======================bZIP_DOF --------->ARR14(2) -->ANAC58   <--------P          --------->ANAC46 ------->TEIL <----------DOF2     <---------MYB111(1)   atcgatcaacacgtagtaggtgtctttcgccctaaactcaacgaccaagatgaactcaagctttactttgctgtcgtgtccgacaactaccggatagatg  5398800                                                                                         --------->SPL7                                                                                         --------->MYB52(1)                                                                                       <---------SPL7                                                                                      ------->GAMYB                                                                                     <------------AtMYB77                                         --------->ANAC58                            --------------->AtSPL3                                         --------->ANAC58                           ------>MYB46(1)                                        --------->LBD16                             ------>MYB83                                      ------->MYC3                                  -------->P                                      <-------MYC3                                 ------>MYB83                                      <-------MYC2                                 ------>MYB46(1)                                      ------->MYC2                              --------->ANAC58                                     --------->ANAC58            <---------ANAC46  --------->MYB52(1)                                     --------->ANAC58            <---------ANAC58<---------MYB59                                     --------->ANAC46            <---------ZAT6 --------->ANAC46                                   <---------ALFIN1              <---------ANAC58--------->MYB46(3)                                  <---------REM1(2)              ----------->GT1--------->ANAC58                                <---------WRKY38(1)         --------->ALFIN1   ------->TEIL   -------    ------->TEIL                <---------WRKY45            <---------REM1(1)--------->REM1(2)<------ -----ZmHOX2a(1)           --------->ZAT14               <---------AtMYB61   --------->ZAT14--------- ------TOE2(3)             <---------ZAT14            <---------YAB1      <---------ANAC46<---------LBD16   aggatgaatctaaattcggacaaatagagcgtagtcaacacgcgcgtaaatgagttctgatggtgtagcgtaaaaaccgtgtacccaaccgtaccggatt  5398900                                                                   --------->ARR11(3)                                                                   <---------ARR14(2)                                                                   <---------ARR11(3)                                                                   --------->ARR14(2)                   <---------HSFC1(2)                             --------->GLK1(1)                   <---------At4g35610                            <---------GLK1(1)          <---------HSFB2a(2)                                  --------->ANAC46      *TSS          --------->HSFB2a(2)                                  --------->ANAC58   --------->ANAC46      <----------DOF2                                     --------->ANAC46        --------->ANAC58 -->ARR14(2)       --------->At4g35610                  <-----------GT1------>ZmHOX2a(1)------------- ---ARR14(2)       --------->HSFC1(2)<------ZmHOX2a(1)  --------->MYB52(1)        --------->ANAC58 <- >LBD16  <---------LBD16 ---------->DOF2        <---------ZAT6 --------->ANAC58 <-----------GT1<<<<<<   ccatctatctttctggatgggagcatccaaagagaagaaggagagagctagtcttatataacgacacgatatcctcacctatttacgcctcattttcttc  5399000                                                --------->ARR14(2)                                                <---------ARR14(2)                                        <----------CDC5                                       --------->LBD16                         --------->ZAT14----------->HVH21                        <XXXXXXXXXXXXXXXXXXXXXMIR2936 ---------->TaNAC69(2)<---------ANAC46<---------ANAC46   <----------DOF2                          <-- ----------GT1    <---------ZAT14    <---------LBD16 <----------DOF2      <---------AHL20(2) -------- <<<TBF1         xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      <---------AHL20(2)          <--------   ttcacctctctctctgtgtgtgttctgtgttctctctctcgcgcgaagcggttctctttcttttgtttatttgtttttatttgtttttctcttatacgga  5399100                    <----------DOF2               <------NtERF2               --------->ATERF1(1)              ------>NtERF2              <---------ATERF1(1)              <---------RAP2.3(1)             <---------RAP2.6(2)             <---------ANAC58             <---------RAP2.3(2)             --------->ARR11(3)             <---------PCF2                  <---------ARR11(3)             <---------ANAC46                --------->ARR14(2)             <---------ANAC58                <---------ARR14(3)            <------NtERF2           --------->HSFB2a(2)                 <------MYB46(1)            --------->ATERF1(1) <---------ZAT2 ------>ZmHOX2a(2)        <------MYB83            --------->RAP2.3(1) <---------GLK1(1)                     <---------WOX13(1)           <---------ERF1  <---------LBD16   <---------ARR14(2)     <---------MYB46(3)           <---------ATERF1(1)  --------->GLK1(1)                   --------->ATHB12           <---------RAP2.3(1)  <---------At4g35610                 --------->MYB55(2)          --------->ALFIN1--------->MYB52(1)--------->GLK1(1)     --------->At5g28300   <----------DOF2          <---------RAP2.3(3)   --------->At4g35610              <---------ANAC46       <---------DAG2          <---------RRTF1(3)    --------->ZAT2<------ZmHOX2a(2) <---------DEAR3(1)  ---------->ID1 ----ZmHOX2a(1)----------->RAV1(2)  <---------HSFB2a(2)        --------->ZAT18   <----------DOF2    < ->ANAC46 <---------DEAR3(1) --------->LBD16<---------GLK1(1)  --------->ZAT14  <----------DOF2     - -LBD16--------->ALFIN1  <-----------GT1   ----------->ARR10   <---------ZAT14  <---------DAG2  <----   ggagagaagatggtggcgcctgctttgttaccggagctctggacggagatccttgtaccgatttgtgcggtgattggtatcgccttttcgcttttccaat  5399200                                                           --------->MYB52(1)                                                           <<<<<<<<<<<<<<<<<LFY                                                        <---------At4g35610      --------->At5g28300             <---------ANAC46         ------>NtERF2     --------->At4g35610     ----------->GT1       ------->TEIL         --------->WRKY12    <---------LBD16              --------->CCA1(2)      <---------CCA1(2)     ----------->HVH21 <---------SPL7                --------->ARR11(1) -------TEIL <---------ANAC58       <------NtERF2  <---------------------WRI1--------->ARR14(1) -------->SPL7--------->LBD16     ---------->CDC5 --------->LBD16           <---------ARR14(2) -----ATHB12 <---------ANAC58     <---------DEAR3(1)--------->ALFIN1        --------->ARR14(2)    <--   ggtacgttgtatctcgcgtgaaactcacctctgacctcggcgcatcgtcttccggtggagctaacaatgggaagaatggatacggtgattatctaatcga  5399300                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                              <------                                                <-------TEIL                                  -------                                               --------->GLK1(2)                              <------                                         <----------CDC5                   ------>ZmHOX2a(2)  <------                                        --------->At4g35610               <------ZmHOX2a(2)   -------                                      --------->ZAT14                    <---------ARR11(3)   <------       <------MYB46(1)                <---------ZAT14                    --------->ARR11(3)   -------       ----------->GT1                <---------ZAT18                    --------->AGP1      <-------       <------MYB83                   --------->ZAT18                    <---------AGP1      <-------    <------ZmHOX2a(1)      <---------REM1(1)----------->ARR10      ----------->GT1   <---------DAG2 ----ZmHOX2a(1)         --------->ALFIN1<---------At4g35610     --------->LBD16      <----------DOF2   ggaagaggaaggtgttaatgaccagagtgttgtcgctaagtgcgctgagattcagactgctatttccgaaggtaagatctattgatactttattcagatc  5399400  --------->ZAT14                         <---------MYB46(3)  <---------ZAT14                        <--------P ->ZmHOX2a(2)                           <-------GAMYB -ZmHOX2a(2)                           <---------MYB46(3) --->GLK1(1)              <---------MYB52(1)                                                        - -----ARR10      ------>ZmHOX2a(2)     --------->MYB55(2)                                           < -->ARR11(3)    <------ZmHOX2a(2)     <---------AtMYB61                                      <------- ---ARR14(2)    --------->CCA1(2)   <------MYB83                                             <------- ---AGP1       --------->AGP1   --------->ATHB12                                           --------->ARR11(3) -->AGP1       --------->ARR14(2)   <------MYB46(1)                                        <---------ARR11(3) ---ARR11(3)   <---------AGP1  <---------YAB1                                              <---------ARR14(2) -->ARR14(2)   <---------ARR11(3)  <---------AtMYB61                                       --------->ARR14(2) --At4g35610   --------->ARR11(3)  <---------MYB46(3)         ----------->GT1  <-----------GT1 ------ --CCA1(2)     <---------ARR14(2) <---------WOX13(1)          <---------MYB46(3)           --------->GLK1(2)   tcactgttctgtttttagatctggctctgttttttgattggtggttgtttgatgatgttttggattgttagaacgttgaaattactaattcagtatcttg  5399500  Previous    Next  AGI:  At1g15690.1    Description:  AVP1 (vacuolar-type H+-pumping pyrophosphatase 1); ATPase. Identical to Pyrophosphate-energized vacuolar membrane proton pump 1 (AVP1) [Arabidopsis Thaliana] (GB:P31414;GB:O80390;GB:Q41919;GB:Q41920;GB:Q56WP6;GB:Q8RY20;GB:Q8VZE3); similar to AVP2 (ARABIDOPSIS VACUOLAR H+-PYROPHOSPHATASE 2) [Arabidopsis thaliana] (TAIR:AT1G78920.1); similar to AVP2 (ARABIDOPSIS VACUOLAR H+-PYROPHOSPHATASE 2) [Arabidopsis thaliana] (TAIR:AT1G78920.2); similar to PPase [Hevea brasiliensis] (GB:AAS66771.1); similar to inorganic pyrophosphatase [Nicotiana tabacum] (GB:CAA58701.1); similar to pyrophosphate-energized vacuolar membrane proton pump [Thellungiella sal Range:  from: 5398985    to: 5402514    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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