Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             <---------AHL20(2)                                                                           --------->AHL20(2)  <---------YAB1                                                          <---------AHL20(2) ----YAB1                                                                 --------->AHL20(2)        < ->ATHB12                                                            ------>ZmHOX2a(1)            --- --ICU4                                                             --------->TOE2(3)         <------ >ATHB1                                                          <---------ARR11(3)          -------- ->ATHB51                                                        --------->ARR11(3)          <------- -AHL20(2)                                                      <---------GLK1(1)           --------- >AHL20(2)                                                      --------->GLK1(1)          <---------YAB1 >AHL20(1)                                                     --------->ARR11(3)        <---------AHL20(2) >ICU4                                                         <---------ARR11(3)       --------->AHL20(2) -YAB1<---------AHL20(2)   <---------ICU4                  --------->TOE2(3)            <---------AHL20(2)   agttatatttagttagagttttatattcaagattactaaataacaaaattatccaaaataacctagatatcctaaatttttttagttttatttattaaaa  5378500                                                                               <---------AHL20(2)                                                                             <---------YAB1                                                                         <---------GLK1(2)                                                                  --------->MYB46(3) -----------GT1                                                  --------->At4g35610 ------>AHL20(2)         ------>MYB46(1)                         <---------At4g35610 ---YAB1               <---------MYB59                <-----------GT1  --------->LBD16 ->AHL20(2)         <-----------GT1               --------->AHL20(2)  <---------ANAC46 --AHL20(2)  ---------->DOF2    <---------ANAC46  --------->AHL20(1) <---------LBD16 >YAB1<---------AHL20(2) ------>MYB83             <---------AHL20(2)--------->MYB52(1)   ttatacatttttttgtaaagagtaaccaaatttttcgtaaaactaaaacaaattttttacaaaattgaactgccggattatttttttttgcaaatgttct  5378600                                                                            ---------->DOF2                                                                           --------->AHL20(2)                                                                           <---------AHL20(2)                                                                          <---------YAB1                                                                        -------->HAHB4                                                                        <--------HAHB4                                                                        --------->ATHB51                                                                        <--------ATHB1                                                                        <---------ICU4                                                                        --------->YAB1                                                                       --------->ICU4                                                                       <---------ATHB51                                                                       --------->AHL20(2)                                                                       <---------YAB1                                                                     --------->YAB1                                                                   --------->AHL20(2)                          --------->AHL20(2)                      --------->YAB1----------->GT1<-----           --------->GLK1(2)  --------->ZAT6                    --------->AHL20(2)   --------->ZAT6   catttgaaggaagaatttgagagaaaaataaaacactagttaacaattgaaacttaagaccggtcttaaaataataattaaagggaaacactagtttaat  5378700                                    --------->ANAC58                                    --------->ANAC46    ------->MYC2                           --------->AHL20(2)           <-------MYC3                           <---------AHL20(2)      ----------->RAV1(1)                           <--------ATHB1      <---------TOE2(3)                           --------->ATHB51  <---------ICU4                           <---------ICU4 <---------ICU4------->MYC3                          --------->ICU4 --------->AHL20(2)                          <---------YAB1 <---------AHL20(2)    <---------ZAT18  --------->YAB1                        --------->YAB1   <---------ATHB51   <----------DOF2--------->LBD16     <----------DOF2  --------->AHL20(2) --------->ICU4 <-------MYC2      --------->ANAC46    <------ ----YAB1    <---------DEAR3(2)     --------->ANAC58    ------->MYC4     <---------LBD16     >>>>>>>>   attgaaactttaggccggtctcaaaataataatttagcacgaaataattaaggcaacatgtgctttgcacttcaacgcggaatcatatgaattatacatt  5378800                                                              --------->YAB1                                                            --------->AHL20(1)                                                            --------->AHL20(2)                                                            <---------AHL20(2)                                                           --------->YAB1                                                           <---------ICU4                                                          --------->ICU4                                                          <---------YAB1                                                        <--------HAHB4                                                        <---------ICU4                                                     --------->YAB1                                                     --------->TOE1(3)                                                     --------->TOE2(3)                --------->O2                        <---------ATHB12                <---------bZIP60(2)  <---------AHL20(1) --------->ATHB51                <---------ANAC46     <---------AHL20(2) --------->YAB1                <---------O2         --------->AHL20(1)--------->ICU4           <------------CBF          --------->AHL20(2)<---------YAB1          <--------P          --------->ATHB51          --------->YAB1 ------>MYB46(1)        <------------CBF         <---------YAB1         --------->AHL20(2) -------->P<---------YAB1  <---------MYB46(3)    <------ZmHOX2a(1)          --------->AHL20(2)  ------>MYB83         <---------YAB1   <---------YAB1            <----------DOF2     <---------MYB111(1)   ------------>CBF  <---------TOE2(3)  <---------ARR14(2)          --------->AtMYB61    --------------->AGL15  <---------TOE2(2)  --------->ARR14(2)         --------->MYB46(3)   <-----------------AGL3       --- ------CBF--------->ATHB12------>NtERF2         --------->DEAR3(2) --------->ZAT6*TSS           <---- >EIN3<---------YAB1<---------DEAR3(2)<---------YAB1--------->MYB46(3)<---------------AGL15   -------   gacttaggattattattgacgtcgattcggcctttaaattataatttagaaccaaccataattataatatcactacaattggttagtatcaaacaattta  5378900                                                                 --------->AHL20(2)                                                                 <--------ATHB1                                                                 <---------AHL20(2)                                                                 <---------ICU4                                                  ------>ZmHOX2a(2)                                                 <------ZmHOX2a(2)                                                --------->ARR11(3)                                                --------->ARR14(2)              <---------ICU4                                                <---------ARR14(2)             <---------ATHB12                                            ---------->DOF2      --------->ATHB51                                         --------->YAB1         --------->ICU4 <---------ATHB51                                        --------->ICU4          <---------YAB1 --------->ICU4                                      --------->YAB1          --------->YAB1   <---------AHL20(2)         <---------ICU4              <------ZmHOX2a(2)       <---------AHL20(2)--------->AHL20(2)  ----------->GT1           --------->HSFB2a(2) <---------ARR11(3)        --------->ANAC58 ------>MYB46(3)--------->ZAT14     --------->ARR11(3)   <---------AHL20(2)  ------>MYB46(1) -------GT1<---------YAB1<----------DOF2<---------YAB1   --------->AHL20(2)  ------>MYB83      ------ -->AHL20(2)    <---------ZAT14     <---------ARR11(3) <----------DOF2    --------->ANAC58    <------   acaactgttaaatatcactgcaattgacttttagaatagatcatgataaagatcggtctttaaataataatttagcaccaaataattagagaggctatga  5379000                                        ----------->GT1                                       ----------->GT1                            <---------AHL20(2)                   <---------YAB1              <---------MYB52(1)  <---------ANAC58         --------->DAG2           --------->WRKY38(1)      --------->AHL20(2)  <----------DOF2                 ---------->DOF2      <----------DOF2     <---------AHL20(2) ------->TEIL  --------->ALFIN1--------->ANAC58      ------>NtERF2 --->ATHB12 ----------->GT1 --------->AHL20(2)        --------->ANAC58     <---------PCF2 <---------TOE2(3) ---YAB1 ------------>MYB.PH3(1)  <---------ANAC58  ---------->DOF2       --------->ATERF1(1)   tttgtattttaaatcggttatttatggactttaatttcgagtgggaaaatagaagaaagcaaaagtgatcaatggaggggcctttgttgactaagaatga  5379100                                                ---------->DOF2                  --------->YAB1        ------>ZmHOX2a(1)              --------->MYB46(3)                 <---------YAB1   --------->HSFB2a(1)                 --------->ANAC58            ----------->GT1       --------->HSFC1(2)                  --------->ANAC46          ------>NtERF2          --------->ARR14(2)            <---------ICU4              <---------At4g35610         --------->DEAR3(1)      --------->GLK1(2)            --------->ICU4             <-----------RAV1(2)     ------>ZmHOX2a(1)           <-----------ARR10 <---------ZAT18    --------->ANAC58  <---------At4g35610 --------->ARR14(2)              <---------ARR14(2)--------->ZAT18    >>>>>>>>>>>>>>>>>LFY --------->At4g35610 <---------ARR14(2)  --------->YAB1    --------->TOE2(3)  --------->TOE2(3)     <---------GLK1(2)  --   gcacatcctcgacgacgttacaataatccatggcgattcttcctcaaacgaagagcacatcgtcaacattacaaccaatgtcgattcttcatcagatgat  5379200                        --------->ATHB12      <----------DOF2                       --------->ICU4 --------->YAB1                      <-----------GT1        <---            --------->ATHB12     <---------ANAC55(2)                <---------WOX13(1)           <---           <---------YAB1        ----------->GT1                 --------->ALFIN1      --------->ATHB12         <------ZmHOX2a(1)       <---------ANAC46                ----------->HVH21    <---------YAB1 ------->At4g35610     <---------YAB1<---------YAB1            --------->ALFIN1       --------->ICU4   gagcaaacacaggatgattgtggtgatcatttgagacgtataatagctctttttgtggatgaagggtgtgatggatttacatctagtcatgtttgggtta  5379300                                                                                         <---------ANAC46                                                                                         <---------ANAC58                                                                                         <---------ANAC58                                                                                        -------------                                                                                 --------->DAG2                                                                                ---------->DOF2                                                                             --------->ANAC46                             <-------GAMYB                               <------ZmHOX2a(2)                            <---------MYB46(3)                           --------->CCA1(2)                            --------->MYB55(2)                          --------->ARR11(3)                            --------->MYB111(2)                         <---------ARR11(3)  ---------                            <-----------RAV1(1)            ---------->DOF2 ----------->RAV1(1)   ----                           <--------P                 ----------->HVH21 <---------ARR14(2)  ---------                       <-----------RAV1(2)      ----------->HVH21       --------->ARR14(2)  <-------- ------AtMYB61         =================RAV     ------>ZmHOX2a(1)       --------->AGP1  ------------- ------YAB1     <----------DOF2    ------>NtERF2================================HOX2a_HOX2a ---------   tggtcgagtttgttttgactttgctccaggttgttgcagccattgctgtcctgactctgacaaaagatgaaacagatccacagaaagtgtttcgtacact  5379400  Previous    Next  AGI:  At1g15640.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G15620.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70531.1) Range:  from: 5378881    to: 5380134    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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