Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <---------AHL20(2)                                      <---------DAG2                            --------->AHL20(2)                                <---------ICU4                           <---------CCA1(1)                                -------->HAHB4                           <---------RVE1(1)                               --------->ICU4                           <---------AHL20(1)                           <---------AHL20(2)                           --------->AHL20(1)           <---------TOE1(3)  <---------TOE2(3)                         <---------ARR11(3)           <---------TOE2(3) --------->YAB1                             --------->ARR11(3) ----->ARR14(2)        --------->ICU4 <----------DOF2                <---------TOE2(3) ------ARR14(2)   --------->YAB1--------->YAB1  <---------GLK1(1)   ---------->DOF2 <---------AHL20(2)   atccgatttgtttaaggtaattgtaatgttttaatgatcacttttatttgaattctgaaaattgaagttttaaagatattttttaaataatcgatttcaa  5373100                                   <---------YAB1                         <---------AHL20(2)          <---------AHL20(2)                   <---------ANAC55(2)       --------->AHL20(2)               --------->AHL20(2)                   --------->ANAC55(2)     ------->TEIL                       <---------AHL20(2)<----            --------->YAB1       --------->YAB1     --------->AHL20(2)       --------->AHL20(2) <----            ----------->GT1     <---------YAB1<---------AHL20(2)           ------->TEIL      <-------   caaaatagaaagaattgtaatacatattttttttatcataatatgaattttatatttaatagaaagtttcgattatgcatttaatttcatacaattgact  5373200                                                                                 <---------ANAC46                            <-----------GT1                                      <----------DOF2                      <---------AHL20(1)                                     <-------MYC3                      <---------AHL20(2)                                     <-------MYC2                      --------->AHL20(1)                             --------->ANAC46                      --------->AHL20(2)                             --------->ANAC58                     --------->AHL20(2)                              --------->ANAC58                     <---------AHL20(2)                   ---------->DOF2    ------->MYC4 ------DOF2      --------->AHL20(2)                     --------->ANAC58     ------->MYC2--------->AHL20(2) -----DAG2       <---------AHL20(2)                     --------->ANAC46     ------->MYC3<---------AHL20(2) ----GT1    <---------AHL20(2)       <----------DOF2    --------->ANAC58----------->RAV1(1)   tttcgactgttcattttttttaattttattttacaacgacttttagacacttcttagcacgaaagaactaaacgcaacatgtgctttgtaattaaacgtc  5373300                                                      <--------ATHB1                                                      <---------AHL20(2)                         <------ZmHOX2a(1)            --------->ATHB51                       <---------TOE2(2)              <---------ICU4                       <---------TOE1(2)              --------->AHL20(2)                     --------->TOE1(2)               <---------ATHB51                    -------->ZAP1                    --------->ICU4             <---------YAB1                        --------->YAB1            <---------AHL20(2)                  ----------->GT1         ------>NtERF2            --------->AHL20(1)            --------->ARR14(2)       --------->SPL7            <---------AHL20(1)            <---------AGP1          ------>MYB83           --------->YAB1==========================HOX2a_HOX2a    ------>MYB46(1)      <---------YAB1           --------->AHL20(2) <---------YAB1------>ZmHOX2a(2)     --------->MYB52(1) <-----------GT1   ------->TEIL  ----------->HVH21        <---------ARR14(2)    <---------MYB52(2)<---------ICU4  ---   gaatgaatatgaattatatttgacctaggattacgaatgatgtcgatctggagtaataatttagaaccgaacgacgacttcgaaatattacaattgactt  5373400                                   <---------ICU4                                   <--------HAHB4                                   --------->ATHB51                                   -------->HAHB4                                   <--------ATHB1                                   --------->YAB1                     <------MYB46(1)                   <---------WOX13(1)       --------->ANAC58                <---------TOE2(2) --------->ICU4             <---------ANAC46     --------->AHL20(2)                  <---------ZAT14        ------>ZmHOX2a(2)       --------->YAB1                        --------->ZAT14       <------ZmHOX2a(2)      --------->AHL20(2)               <---------DAG2                      *TSS      --------->ARR11(3)     --------->YAB1 --------->ANAC58   <----------DOF2                 ------      <---------AGP1 <------MYB83 <---------YAB1              <---------ANAC58                 <-----      <---------ARR11(3)   --------->AHL20(2) ---------->DOF2 <---------ANAC58    ---------->DOF2 <-- ------>HSFB2a(2) <------------CBF<---------ATHB51--------->ARR11(3)  --------->ZAT18       ---------   atagaatagatctcgacgtagattggtcttaaaataataattaagcaccaaagaactggagatggctttatgtgctctgtgttttaaagcggattaataa  5373500                                                                                        --------->bZIP60(1)                                                                                        <---------ANAC55(2)    <---------AHL20(2)                                                                  <---------bZIP60(1)    --------->AHL20(2)                                                                  ----------->GT1 <----------DOF2                         <---------YAB1     --------->WRKY38(1)      ----------->HVH21 --->YAB1                             ----------->GT1  <----------DOF2               ----------->TGA1 ----ICU4                   ---------->DOF2        <---------ARR14(2)  --------->ZAT18 ----------->STF1 ----ZmHOX2a(1) ----------->GT1       <---------ZAT6   <---------MYB52(1)<---------At4g35610   ------ >YAB1        <---------LBD16  --------->At4g35610<------ZmHOX2a(1)    <---------ZAT18<---------TGA2(2)   ggacttttaattcgattggggaaaatagaagaaagcagaagtgataaatggaggaccctttgttgactcagagtgagcacatcgtcgatgacgttacaat  5373600                                                                   --------->At4g35610                                                                --------->ZAT2                                              --------->MYB52(1)<---------At4g35610                                            --------->MYB46(3)  --------->At4g35610                                           --------->ANAC46     <---------ZAT2                                    --------->ANAC46            ----------->RAV1(2)                                 --------->DEAR3(1)      ------>ZmHOX2a(1)          <<<<<<<<<TBF1          --------->ETT(2)       --------->TOE2(3)      --------->GLK1(2)          <---------DEAR3(1) <---------GLK1(1)     ---------->DOF2           -      <---------ARR14(2)<---------ZAT18    --------->ANAC58   <-----------RAV1(2)                   <      --------->ARR14(2)--------->ZAT18    --------->ANAC58--------->REM1(1)                        < --->ANAC46       <---------ATHB12 <---------------------WRI1<---------At4g35610                    <   ccatggcgattcttcttcaaatgaagagcacatcgtcgacgttacaaccaatggcaatccttcatcagctgatgagaaaagaccgcatgagggtgtccaa  5373700                                                                         <------NtERF2                                                                        ------>NtERF2           <---------AHL20(2)                                           <---------RAP2.6(3)           <-----------GT1                                             --------->ANAC46       <---------AHL20(2)                                              --------->ATERF1(2)      <---------AHL20(1)                                               --------->RAP2.6(2)      <---------ARR11(3)                             <----------DOF2   <---------ATERF1(2)      --------->AHL20(1)                            <---------ANAC58   --------->DEAR3(1)      --------->ARR11(3)                         <---------RAP2.6(2)  --------->RAP2.3(1)  <---------ZAT6                               <-----------RAV1(1)    <---------RAP2.6(2) ---------->GT1                              <-------GAMYB       <-----------RAV1(1) ---------ANAC58  >>>>>>>>>>>>>>>>>LFY      <---------MYB46(3)   <---------MYB46(3) ---------ANAC58  <---------At5g28300       --------->MYB52(2) <---------GLK1(2) ---------ANAC46 <-----------GT1  <---------AtMYB61 <---------ANAC58  --------->ATERF1(1)       -----   tggagtgatatatttacatttaccactgtttgtattttggtcgagtttgttgtggctttagtccagattgttgccgccattgttgttctgactctggcaa  5373800                                       ------>ZmHOX2a(1)                                      --------->TOE2(3)                                  --------->GLK1(2)                                     ------>ZmHOX2a(2)                                   --------->ARR14(2)         ------->GAMYB             <---------ARR14(2) --------->At4g35610                <---------ARR14(2)         --------->AtMYB61         --------->ARR14(2)<---------MYB46(3)                <----------DOF2        --------->MYB46(3)   --------->ZAT14        <--------P                        <---------ANAC58       -------->P            <---------ZAT14       <---------MYB52(1)                 <---------ANAC46     --------->MYB46(3)     ------>ZmHOX2a(1) <-----------GT1     <---------ALFIN1    <---------ANAC58 ----->DOF2                 ================HOX2a_HOX2a <----------DOF2        <---------TOE1(2)   aagatgaacaacctccacaaaaaatgtttcctacactgatcctcagttataccggttgctgtattgccacactccctattctaggtttgcgtttctggca  5373900                                                               ---------->DOF2                                                     <---------AHL20(2)                                                     <---------ICU4         <---------ZAT6              <---------YAB1  --------->AHL20(2)         --------->ALFIN1 ----------->GT1            --------->ATHB51                            <---   --------->HSFB2a(2)   --------->ANAC58            --------->ATHB12            <---------ARR14(2)   <---------HSFB2a(2)   --------->ANAC58           --------->ICU4               --------->ARR14(2)   ttcttaccgaagtgttagcacagagacaaggtataaactataatttgtatgttaattatttgttttaaaggcattagaaaccgaaaccgatatagtggtt  5374000  Previous    Next  AGI:  At1g15620.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G15640.1) Range:  from: 5373499    to: 5374570    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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