Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               ------->MYC4             ------->MYC3             <-------MYC4             <-------MYC3             <-------MYC2             ------->MYC2            --------->TGA1a            <---------O2                    <---------AHL20(2)             <---------REM1(2)            <---------TGA1a              <---------AHL20(1)                <---------ZAT14            --------->ANAC55(2)          --------->AHL20(1)     --------->ANAC55(2)            <---------ANAC55(2)          --------->AHL20(2)     --------->ANAC55(1)            --------->O2                 <---------AHL20(2)     --------->ANAC58        ------>MYB46(1)                 --------->AHL20(2)      --------->ANAC46       --------->ANAC55(2)        ------>MYB83                    --------->YAB1          <---------ANAC55(2)   <-------TEIL      ================MYC_MYB          <---------YAB1           --------->ANAC58  --------->ZAT14  --------->MYB46(3)                <---------ARR11(3)       <---------REM1(2)    <---------ZAT18 ------>HSFB2a(2)                 --------->ANAC58       <-----------GT1   --------->ZAT14      ----- -------HSFB2a(2)                 --------->ANAC58    <---------AHL20(2) --------->ANAC46 <---------ICU4 -YAB1------->GAMYB               ----------->GT1<---------AHL20(2)    --------->ANAC46--------->YAB1   ctcgacaaccgaacacgtgttactcaaggctaagacaagttattatattatttcatttttttctacacgtaacacactacacagtgcatacataatttca  5367000                                                            <---------MYB52(1)                                                            --------->ARR14(2)                                                            <---------ARR14(2)                                                          --------->ANAC46                                                       --------->ZAT18                                                     ------->MYC3                                                     <-------MYC3                                                     ------->MYC2              --------->ANAC55(2)                                                     <-------MYC2              --------->ANAC46                                                     ------->MYC4              --------->ANAC58 -----                                                   <-------MYC3                --------->ANAC58------          ------->TEIL                             ------->MYC3 <----------DOF2<---------ANAC55(2)        <-------TEIL         <---------ARR11(3)   =========================bZIP_DOF        <-------MYC3   --------->AHL20(2)        --------->ARR11(3)   --------->TGA1a              --------->ANAC55(1)--- ----->DOF2                 <---------CCA1(2)     <---------TGA1a  --------->YAB1          ------->MYC3   aagaaaaaaatgcatctacgttttcgtcatatatcttgtttctgctattcacacatgtgcccgatactttcattacatcatacgtaatctacacatgtac  5367100                                                                                                   <-                                                                                               <-----                      --------->ANAC55(2)                                                   <--------                      --------->ANAC58                                                      ---------                      <---------ANAC55(2)                      --------->ARR11(3)           ---------             --------->ATHB12                                  <---------ARR11(3)           <--------             --------->ATHB51                                  <---------AHL20(1)           <--------             <---------ICU4                               --------->LBD16                   <--------         <---------YAB1                                  --------->ANAC55(2)          <-----------GT1         ---------->ID1                                  <---------ANAC55(2)       <---------CCA1(1)    <----------DOF2   --------->ANAC58                  <---------LBD16            <---------RVE1(1) ---->ANAC46--------->ICU4                          --------->WOX13(1)            --------->ARR11(3) --->ZAT18  <---------YAB1                        ------------>CBF <-----------GT1<---------ARR11(3)- ------>ANAC46      <-----------GT1        --------->YAB1<---------ANAC46   <---------YAB1 <---------CCA1(2)   accatacttttgtcattatttgttacgaaatagaaacagaactgatcaaaatatcaattacgggatatatttccatttttcatagatatttccatatctt  5367200    ------------>CBF --------CCA1(2)                                                       ------------>CBF -----DOF2                                                            --------->ANAC46 -ARR14(2)                                                           <---------ZAT18 >ARR11(3)                                                           --------->ZAT18 >ARR14(2)                            <---------WOX13(1)           --------->REM1(2) ---ARR10                          <---------YAB1                --------------->AtSPL8 -ARR11(1)              --------->KAN4(1)                       <---------ANAC58 -ARR11(3)              <---------HSFB2a(1) --------->ANAC58    <---------ANAC46         <---------WOX13(1) ------>TEIL           <---------KAN4(2)    --------->ANAC58    <---------ANAC58        <------------CBF   tgtatctccaatagtacatttttggaatgttcacatgttgatagataagctagattagtcaaatttccttgtacacaatttctagttttcgattgatcat  5367300                             <----------DOF2                       <-------GAMYB                       <---------ZAT2                       --------->ZAT2                       --------->At4g35610                       <---------At4g35610                     <---------RAP2.3(3)                     --------->ETT(1)                     <---------RAP2.6(2)                     <---------DEAR3(1)                     <---------At1g77200                     <---------DREB2C(2)                                                    ---------                <------------CBF                                                            -------->HAHB4              --------->ARR11(3)                                                            <--------              <---------ARR11(3)                                                           --------->ICU4              --------->AHL20(1)                                                         <---------ICU4              --------->AHL20(2)                                                         --------->YAB1              <---------AHL20(1)                                                        --------->ICU4              <---------AHL20(2)  ------------>CBF                          <---------ARR14(2) <-----      <---------ANAC58 <------NtERF2  <---------ATHB12                      --------->GLK1(2)  ------      <---------ANAC58<---------MYB46(3)                       <---------YAB1         --------->YAB1<      <---------ANAC46<---------DEAR3(2)                       --------->ICU4   ----------->RAV1(1) -      <---------ANAC55(2)   <---------ANAC58                 --------->YAB1 --------->ARR14(2)-------      <---------ANAC55(1)   <---------ANAC58            <----------DOF2 <---------At4g35610<---------YAB1  <------------CBF  --------->RAP2.6(3)      --------->ZAT6 <---------YAB1 <---------ARR14(1) <------   gtagaattgcgtataatatattgtcggctggctttagccaatgaataacacaacaagactttgtgataatggacagcgaatcccacagtgataatgatga  5367400                                         ================================HOX2a_HOX2a                                         ------>ZmHOX2a(2)                                        =================================HOX2a_HOX2a                                        <------ZmHOX2a(2)                                       <---------ARR14(3)                                       <---------ARR11(3)                                       --------->ARR14(2)                                       --------->ARR14(3) >YAB1                                 --------->ARR11(3)                                          -- -ICU4                     --------->GLK1(2)                                                       <- ----ICU4                 <---------GLK1(2)                                                        -- --->YAB1                 <---------ARR11(3)                      ------>ZmHOX2a(1)          -------- ---------ANAC55(2)       --------->ARR11(3)                     --------->TOE2(3)           -------- -------->ANAC55(2)       --------->ARR14(2)              --------->GLK1(2)           <---------ETT(2) -->ICU4                  <---------ARR14(2)              --------->ANAC58            --------->ETT(2) ---YAB1                <---------YAB1 <---------ARR14(2) --------->ANAC58  <-------TEIL<---------LBD16   tcacataatcgacattacaaacgatgaagattcttcatcaagatcgtctttggacgagagaagctatccttcattaagttcgtctctgtctacggatgac  5367500        <---------REM1(1)      <---------At4g35610                                                                         ---      --------->At4g35610                                                                     <------    <-----------RAV1(2)                                                                       <------  <-----------HVH21                                            --------->ICU4         <---------MYB46(3) ------->ARR14(2)                                      <---------AHL20(2)             <-----------RAV1(1) --------ARR14(2)                                      <---------YAB1               <---------GLK1(2) ----->TEIL                                           <---------AHL20(1)          <---------YAB1<---- --->TGA1            <-------TEIL                     --------->AHL20(2)     <---------MYB46(3)------ --->HVH21     <-------TEIL --------->ANAC46          --------->AHL20(1)  <----------DOF2     -------   gaatcgtcagatgaaggtgcaagttcatctacgagagactgtggtagtctttggaatataatggaattagtagtcactttggttcagattgttgcatcat  5367600       <-----------GT1 ------>YAB1                                                        <-----------RAV1(1) ---ICU4                               <----------DOF2       --------->ARR14(2) --HAHB4 --------->ZAT6           --------->ANAC58         <---------MYB46(3) -----YAB1                        --------->ANAC58     <---------WRKY12                      ------>ZmHOX2a(1) --->TOE2(3)             ------->TEIL  <---------DAG2  <---------WRKY38(1)       <---------YAB1 -->ATHB12       ---------->DOF2--------->MYB46(3)   <-----------HVH21         <-----------GT1    <--   taatagttttaactctggcaaaagatgaacatcaacaagcacttttgttaacatgggtcatcggttacacttgtggctgtattaccattacgctccttat  5367700              --------->LBD16              <------NtERF2             --------->ANAC58             --------->ANAC58            --------->ZAT18            <---------LBD16          <---------ARR14(2)          --------->ARR14(2)     <---------TGA1a     --------->TGA1a     <---------O2     <---------ANAC58     ============================MYC_MYB     <---------ANAC58                                           <---------ALFIN1     --------->O2                                          <-----------GT1       --------->TOE2(3)     <---------ANAC46    ------->GAMYB                 --------->YAB1      --------->ANAC46<---------AHL20(2)  ------>ZmHOX2a(1)      <---------MYB59              <---------YAB1       --------->ANAC55(2)   ---- ---------GT1--------->ANAC46                     ----------->GT1        <-----------GT1   --------->AHL20(2)   tctcctctcgtgtgtccgcaaatacaaccgaattggtgtttactcaaaaacgaggtataataaacaacacttgtttcacttaacattaagagtttaatta  5367800                     <------MYB46(1)                                                           <-----                     --------->MYB52(2)                                                  --------->MYB52(2)                     <---------MYB46(3)                                                <--------P                     <------MYB83 --------->ARR14(2)                                   <---------MYB52(1)                    <---------AtMYB61                                                 <-------GAMYB                 <-----------RAV1(1)                                                 ----------->GT1                 <---------MYB46(3)                                                  <---------MYB46(3)           ------>MYB46(1)   <---------ARR14(2)                                   <---------ANAC58           --------->MYB52(1)--------->MYB52(1)                                   <---------ANAC58  -           ------>MYB83      --------->ARR14(2)                              <-----------RAV1(1)   <-         <---------MYB59 <------NtERF2            <----------DOF2   ------->TEIL  <---------ANAC46 -- ----->At4g35610<---------MYB52(1)<---------ARR14(2)      --------->ALFIN1 <----------DOF2    <------   gctaaatcaaaccgaaccgttgttggtggcagaacggatagggtaatggatgctttgaagatggggaatgaatgtttctttgttgtgtggttagttatgg  5367900  Previous    Next  AGI:  At1g15590.1    Description:  similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G80400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45956.1) Range:  from: 5367369    to: 5368665    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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