Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      <---------YAB1    --------->ALFIN1                                                                <---------ANAC58      ----------->GT1                                                             <--------P <---------AHL20(2)                                                             <---------MYB52(1)       <---------ANAC46                                                            <-------GAMYB  --------->ICU4                                    <---------ANAC58       <---------MYB46(3)    --------->MYB52(1)<-                               <---------ICU4          <---------ZAT2   --------->AHL20(2)    -------                              --------->ICU4   <-----------GT1  <---------ANAC58 <---------DOF5.7(2)   ---------->DOF2  ---------->DOF2 <---------ANAC58   --------->ZAT2 --------------->AGL15  <-------   aaccaaaaagaaaatgaaaacagaaagttgtattaatggctagggattttaacttgtagctcggttgcttctcattaattagtaaacggtgtgaattaat  5361600                                                                                           --------->ARR11(3)                                                                                ------>ZmHOX2a(2)                                                                               <------ZmHOX2a(2)                                                                               --------->GLK1(1)                             <---------YAB1                                   <---------ARR14(2)               <---------ANAC55(2)                                            --------->ARR14(2)               --------->ANAC58                                               --------->ARR11(3)               --------->ANAC46                                               <---------ARR11(3)               --------->ANAC58  <-----------RAV1(1)                          <-----------ARR10      >>>>>>>>>>>>>>>>>LFY --------->YAB1                                     <---------AGP1 ------>ZmHOX2a(2)     <-----------GT1     <---------ARR11(3)                           <-----------GT1      <---------ARR11(3)  --------->ARR14(2)     --------->ARR11(3)                <---------ETT(2)   --------->AGP1<--------  <---------ARR14(2)    --------->YAB1        <---------AHL20(2)   <---------ICU4  <---------LBD16  ----------------------->TaNAC69(2)         --------->AHL20(2)    --------->YAB1----------->HVH21  < --------ANAC46--------->ANAC55(1)       --------->ICU4    --------->ETT(2)  <---------CCA1(2)      < -->MYB52(1)   --------->ANAC55(2)  ----------->GT1     <---------REM1(1)------->GAMYB  <--------P <- --AHL20(2)   ------->TEIL<------ZmHOX2a(2)  <---------AHL20(2)   --------->AHL20(2)--------->ANAC55(2)   ggcatatataccattgtacgtaacaaggatcataaatgtggcaaaaattaaatcacagttgtagacaaataataaccccagatctcacgggttgatctcc  5361700               --------->ANAC58                <---------AHL20(2)               --------->ANAC46                --------->AHL20(2)               --------->ANAC58               <---------AHL20(1)              --------->ZAT18                 --------->AHL20(2)                   <---------DAG2 -GLK1(1)     <---------ZAT18                 <---------AHL20(2)       --------->AHL20(2) -----------ARR10                  ---------->DOF2                     --------->YAB1 ---------ARR11(1)             <---------AHL20(2)                 --------->LBD16  <----------DOF2  < --------CCA1(2)               --------->AHL20(2)  --------->AHL20(2) <---------ATHB12     <---------CCA1(2)   caaatctatgtttaagcacgctactaaattcaaaaaattaagcactaatttaattaactcaagtctcccccaataaaaacacttcctttttgtctatctc  5361800                  --------->ANAC58             <---------WRKY38(1)             <---------WRKY12             <---------WRKY45            <<<<<<<<<<WRKY11            <<<<<<<<<<WRKY6            --------->WRKY18(1)         <---------AHL20(2)    --------->ANAC55(2)                 <---------AHL20(1) --------->ARR14(2)                     --------->AHL20(1)                                          < <---------ARR14(2)                    --------->AHL20(2)                   <----------DOF2        -- ---------CCA1(2) --------->ANAC58 <-------TEIL--------------->AtSPL8 --------->ICU4           <-----   ccatatatgtaatggtcaacaagtcaaatttttaaaattcattatattctctgtacatgaaaacatttagtaatgtttctttttaaaaaacactgttttg  5361900                                                    --------->AHL20(2)                                                    <---------AHL20(2)                                                    --------->ATHB51                                                    <---------ICU4                                 <-                                               ------>ZmHOX2a(1)                                   <-                                              --------->TOE2(3)                                <-----               ----------->GT1         <-----------GT1                                         ------        <---------MYB52(1) <---------YAB1     --------->TOE1(3)                                <----- ---------AHL20(2)     <---------AHL20(2) <----------DOF2                            --------->AtMYB61 ------->AHL20(2)    <---------YAB1   <-----------GT1                             <-----------GT1  <- ----YAB1    ---------->DOF2      <----------DOF2  --------->ICU4      <----------DOF2       <-------   atttaatgtcgttagtaaagtttattattttgatttctttttaactttccttaattatttctaaatgtgtcttctttatcgtttaaaccacactagtgtg  5362000                                                                   =======================HOX2a_HOX2a                                                                   ------>ZmHOX2a(2)    *TSS------>ZmHOX2a(1)                                        --------->ARR14(2) --------ANAC58                                     <---------ARR14(2) --------ANAC58                                     --------->ARR14(2) ----ANAC58                                  --------->ARR14(2)  <---------ARR14(2) --->ALFIN1                           ---------->DOF2  <-----------GT1             <---------CCA1(2) ----ANAC58                         ---------->DOF2=======================HOX2a_HOX2a --------ANAC46  ---------->DOF2  --------->LBD16  <------ZmHOX2a(1)       ---------->DOF2    <------ --ANAC46    <----------DOF2 <----------DOF2 <---------ARR14(2)  <---------AGP1    ------>ZmHOX2a(1)   tgcgtgtctccttcactttcaaagacagtctctttccccaaagagcggattcaggattcaccatctcgatctgtgtccaaagctcctatctttcttcttt  5362100                            <-----------HVH21                           --------->At4g35610                   <---------At4g35610     <----------DOF2               <---------HSFB2a(2)      <---------ARR11(1)               --------->HSFB2a(2)      --------->ARR11(3)              <---------LBD16          <---------CCA1(2)                                           <-          <---------HSFB2a(1)      --------->TOE2(3)--------->TOE2(3)      ---------->DOF2         <- ----DOF2 --------->HSFB2a(1)   <---------CCA1(2) <-----------GT1       --------->YAB1           <---   cttccctgaagaattttctggagcttctcaggtcaaatctcaaatctttttttaacttaattttgttatttctatcagaaagtttcgatttttatgctca  5362200                                          <------NtERF2                                         ------>NtERF2                                         --------->LBD16                                         <---------RAP2.6(3)                                        --------->RRTF1(2)                                        >>>>>>>>>AtERF-2                                        >>>>>>>>>AtERF-4                                        >>>>>>>>>AtERF-3                                        --------->RAP2.3(3)                                        --------->RAP2.6(2)                                        >>>>>>>>>AtERF-7                                        --------->RRTF1(3)                                        --------->DEAR3(1)                                        --------->RAP2.3(2)                                        --------->ATERF1(2)                                        <---------ATERF1(2)              ------->TEIL             --------->RRTF1(1)              --------->ARR14(2)       --------->ERF1              <---------ARR14(2)       --------->RAP2.3(1)             <---------CCA1(2)         --------->ATERF1(1)           --------->ANAC46            --------->DEAR3(2)          --------->LBD16             <---------At4g35610      --------->ARR14(2)  <---------MYB52(1)---------->DOF2      <---------ARR14(2)<---------ANAC58>>>>>>>>>AtERF-5 --------ANAC58         <---------ANAC58>>>>>>>>>AtERF-1<----------DOF2         <---------ARR14(2) --------ANAC58     <----------DOF2   --------->At4g35610               --------->ATHB12 ------YAB1--------->TOE1(1) <---------ANAC46           <---------DAG2<----------DOF2   tgcttgtgcatccgcgtacctgcatttcgttttgtgtttgagccgccaaagttttcaacttttttttttgggatttattgcaaatttgtcgatgttgaaa  5362300                                                                                                <----                                                                                                -----                        --------->DAG2  <-------GAMYB                  <----------DOF2          -----             --------->GLK1(2)    --------->GLK1(2)           <---------ANAC46                  <----         --------->YAB1---------->DOF2  <---------At4g35610   <-----------RAV1(1)<---------TOE2(3)  <   ggttttctcaaggagaatgtgaagaaaaaggaagagaatgtgagttgattttaggcatagggttttgtgggttctttcagatttatgtagaatggtgcag  5362400                                                               <---------DAG2                                                --------->ANAC58     --------->ATHB12               <---------MYB52(1)         <----------DOF2                    <--    <-------TEIL                 ------>ZmHOX2a(2)        --------->At4g35610                     <-- -----ZAT2                      <------ZmHOX2a(2)         <---------At4g35610                     --- ---->ZAT2                     --------->ARR14(2)         <---------ZAT2                         ---- ---->At4g35610                <---------ARR14(2)        ------->TEIL                         <------ -----At4g35610                <---------ARR11(3)     <---------REM1(1)                 <---------WOX13(1) ---------YAB1              <---------TOE1(2)   --------->ANAC58                   <---------At4g35610   ctctgattcatgggtttgcaaatggtttctcacgatctgttcgttttcccaaggaaatgtagctgcttttttttttttttttgtcatcagattgaaatgt  5362500  Previous    Next  AGI:  At1g15570.1    Description:  CYCA2;3 (CYCLIN A2;3); cyclin-dependent protein kinase regulator. Identical to Cyclin-A2-3 (CYCA2-3) [Arabidopsis Thaliana] (GB:Q38819;GB:Q8VYG1;GB:Q9M9D7); similar to CYCA2,4 (CYCLIN A2,4), cyclin-dependent protein kinase regulator [Arabidopsis thaliana] (TAIR:AT1G80370.1); similar to cyclin (GB:AAA51659.1); contains InterPro domain G2/mitotic-specific cyclin A (InterPro:IPR015453); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin-related (InterPro:IPR013763); contains InterPro domain Cyclin, A/B/D/E (InterPro:IPR014400); contains InterPro domain Cyclin, N-terminal (InterPro:IPR006671); contains InterPro Range:  from: 5362004    to: 5365544    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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