Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    --------->TOE2(3)                  <-----------HVH21                 --------->ANAC58                 ----------->GT1                                                                 ----            --------->ANAC46                                                                     ----            --------->ANAC55(2)                                                                  ----            --------->ANAC58                <---------AHL20(2)                                   ----            <---------ANAC55(2)             --------->AHL20(2)                         <---------ATHB51          <-----------GT1                 --------->TOE2(3)                            <---------AHL20(2) ---------At4g35610                     <-------TEIL                               <---------AHL20(2) ------At5g28300 --------->ANAC58    <---------DEAR3(2)            <---------ALFIN1--------->AHL20(2) -------GT1 --------->ANAC58        ------>ZmHOX2a(2)            ------->GAMYB  --------->YAB1 <-----   acagttgagaaattacgaaacgtcaaacccagtctcgatcggttcattaattagatttaagacttaaccccgctccgttcaagaataaaataatgggctt  5342200                    <---------ZAT18                    --------->ZAT18                 ---------->DOF2 ----------------->AGL3 ----->WRKY38(1) --------->YAB1 ----->WRKY12    <--------ATHB1                               ------->MYC3 ------->HVH21  <---------ATHB51             <----------DOF2  <-------MYC3       ------->MYC3    ---- ----->WRKY45   <---------ATHB12 <---------DAG2      <----------DOF2 <---------YAB1    ----------->GT1 -----DOF2  ------------>CBF     <----------DOF2 ---------->ID1<---------ANAC46  <-------MYC3 <------   tgacccaaaattagcccaataatgcactactacggccttatcgatttctttgtttctttttccatgtgtgtattatagggacatgtggattttaaaaatt  5342300                     --------->ANAC58                     --------->ANAC58                   ---------->DOF2               --------->ANAC58          <----------ID1          --------->ANAC46          --------->ANAC58                                              <---------AHL20(2)       --------->ARR14(2)                                               ------------>CBF       <---------ARR14(2)     --------->YAB1                      --------->YAB1    ------------>CBF--------->DAG2                       <---------ANAC58 ----->ATHB12  --------->ANAC58          <----------DOF2 <---------ANAC46                   --------- ------CBF--------->ANAC58   ----------->TBP             <---------ANAC58            --------->YAB1 <   gattcggacaatacgccaaggaaaagcatctataaaaactgagcttttacatgagtttttcgtatgaagcatatttcaatgtgagtataagaacacatca  5342400               <---------At4g35610   <---------------AGL15               --------->At4g35610   --------------->AGL15            <---------DAG2            <XXXXXXXXXXXXXXXXXXXXMIR774                               <----------DOF2           <-----------HVH21        --------->TOE2(3)              <---------TOE2(3)     ------------>CBF          <---------ICU4             <---------TOE2(3)     --------->YAB1 <---------MYB52(1)          <---------AHL20(2)         <---------AHL20(2)     <---------YAB1 >ANAC46  --------->YAB1    --------->YAB1      ----------->GT1    <---------TOE1(3) -----------HVH21      ----------->GT1  ---------->DOF2--------->AHL20(2)   <---------YAB1         --   tccgttacacaatggtcatatgagtaagtataaaaatttcttaaaagagtgagtaaaattaatgtaattaagctttttgttattatagtttatcttcttc  5342500                                                                    <------ZmHOX2a(1)                                                                   <---------YAB1                                                               <---------ANAC58                                                               <---------ANAC58                                                             <---------YAB1                         <------MYB46(1)                   --------->YAB1        <---------ANAC58                     --------->ATHB12                --------->MYB52(1)----------->GT1      ------->TEIL        ----------->GT1  <------MYB83           --------->AHL20(2)<---------TOE2(3)--------->ALFIN1 - ---------->CBF   <------------CBF     <----------DOF2    <---------YAB1         <---------ANAC58   <   gtccaatacatggttaactatattgtttggtttttctaattcttttctaataaactaactatgatgcttaggatagttaaaatgggtgggaatgaaacta  5342600                                                                                       --------->AtLEC2                                                                                  --------->ANAC58                                                                                  --------->ANAC58                                                                                --------->REM1(2)                                                                                ---------->DOF2               ------->TEIL                                                   --------->LBD16               -------->P       --------->TOE1(3)                            <---------ANAC58          --------->YAB1        --------->TOE2(3)                         <-----------HVH21         <---------ATHB12       <---------MYB59                           <---------SPL7         <------ZmHOX2a(2)    ------->TEIL<---------ZAT14               <---------At4g35610 <---------At4g35610         <---------ARR11(3)                --------->ANAC46<---------MYB52(1) --------->At4g35610       --------->ANAC58              <---------At4g35610 <---------ANAC58 -------->ARR11(3)         --------->ANAC58        <----------DOF2      --------->At4g35610 ---------ARR11(3)    ----------->HVH21   --------->ZAT14--------->At4g35610 <---------ANAC46   gagagcttccgatcatcaacctctctgacaagaacctaaaacagaacacagagctttggagcttcacgagagacagcgtccgtgaagccatggaacacca  5342700                                                                   ===================HOX2a_HOX2a                                                                   <------ZmHOX2a(1)                                                                 --------->ANAC58             <------NtERF2                                       <---------TOE2(3)        <---------RAP2.6(2)                                      --------->ANAC58      <-----------RAV1(1)                                     <----------CDC5               <--------      --------->MYB52(2)                                     <------NtERF2   <---------ARR11(3)      --------->ALFIN1                                       <---------At4g35610       <---------ETT(2)    <---------ANAC46                                         --------->At4g35610    ------>ZmHOX2a(1)   <<<<<<<<<<MYB80                 <------ZmHOX2a(1)        --------->RAP2.6(2)------>ZmHOX2a(2)  <---------MYB46(3)          ----------->RAV1(1)          --------->ZAT18   <---------ARR14(2)    --  <------MYB46(1)        <----------DOF2                  --------->ATERF1(1)--------->ARR11(3)------  <------MYB83       --------->MYB46(3)                  <---------ATERF1(1) --------->ARR14(2)------   tggatggtttgtggccgagtacaacaactttccaacaggacttcaccagtcgattttggaggccgctaaggaactactcgatcttcctgtcgaaatcaag  5342800                          --------->ANAC58                          --------->ANAC58                       <---------REM1(2)                       --------->ARR14(2)                       <---------ARR14(2)       --------->At4g35610                      <-----------HVH21         <---------At4g35610                     ----------->HVH21        <-----------RAV1(2)                     <------NtERF2          <-----------HVH21                     <---------SPL7        <---------bZIP60(1)                     --------->LBD16       --------->TGA2(1)                    --------->ICU4 -ATHB12            --------->RAP2.6(2)    <---------TGA2(1)          <---------ARR11(3)  <---------DOF5.7(2) -------->DOF2     <---------LBD16         --------->bZIP60(1)        --------->ARR11(3) <---------WRKY45 --->ANAC58    ---------->DOF2  --------->REM1(1)                     --------->ARR14(3) <---------WRKY38(1) --->ANAC58--------->MYB46(3)   --------->bZIP60(2)                   <---------ARR14(3) <---------WRKY12   ctaaagaacgagaaccacaaggccggacacggctacatcaccatgatgtcagatggccagcctgttcatgaaggtcttggtattgatcaagtcaacgatg  5342900                                               --------->YAB1             <---------AHL20(2)                                            <---------ICU4                --------->AHL20(2)                                            --------->YAB1     ----------->GT1                    --------->TGA1a      --------->YAB1       <---------HSFB2a(2)                    =========================================MYC_MYB    --------->AHL20(2)                    --------->O2         <---------ICU4 <---------------AGL15             <---------ARR14(2)         <---------YAB1 ----------------->AGL1             --------->ARR14(2)       --------->YAB1   <-----------------AGL1             <---------GLK1(2)       <---------YAB1    <-----------------AGL2   <---------AHL20(2)           --------->LBD16      <---------ANAC46     ------->GAMYB   <---------AHL20(1)          <------NtERF2         <---------ANAC58    --------->MYB46(3)  <---------AHL20(2)         --------->LBD16   --------->TGA1a --------->ICU4     --------->HSFB2a(2) <---------AHL20(2)         <---------LBD16   <---------O2<---------ARR11(3)  --------->ARR14(2) <---------AHL20(2)         <---------At4g35610    <---------ANAC58    <---------MYB52(2)--------->AHL20(2)         ------>NtERF2     ==================================MYC_MYB --------->AHL20(1)        --------->DEAR3(1) <---------TGA1a <---------YAB1  <---------ARR14(2)--------->AHL20(1)        <---------ANAC46   --------->O2--------->ARR11(3) <---------MYB52(1)<---------AHL20(2)     --------->ALFIN1      <-----------RAV1(1)<---------YAB1 <---------ANAC46<---------AHL20(1)------   ttcaacagtgccgcggattctctcgtctcatgtggcctgatgatcatgatgataacgaccgtttctggtaatatatatatatatttttatcaaataacat  5343000                                                                         ---------->DOF2                                                                        --------->ARR14(2)                                                                        <---------ARR14(2)         --------->ANAC58                                         <-------MYC2         --------->ANAC58                                         <-------MYC3                     <-     --------->YAB1                                               ------->MYC2                   ----  --------->WOX13(1)  --------------->AtSPL8                      ------->MYC3      --------->ARR14(2) --->TOE2(3)      <-----------GT1   <---------YAB1           --------->AtLEC2       <---------ARR14(2)   aaaacaatcacaagtatttgttactatgtactaacaatatgatatgttatagtgaaactgttcatgcatatgcgaaaatgcaagcggaactagagcaact  5343100  Previous    Next  AGI:  At1g15540.1    Description:  oxidoreductase, 2OG-Fe(II) oxygenase family protein. similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT1G80320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45979.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123) Range:  from: 5342582    to: 5343700    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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