Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <---------ANAC58              --------->ANAC55(2)              <---------ANAC55(2)            <-----------GT1                                 --------->ANAC46      <----------DOF2                                       --------->ANAC58  <-----------GT1  --------------->AGL15 <----------DOF2    --------->ANAC58 ----At4g35610<---------ANAC58   <-----------GT1     --------->YAB1 --------->ZAT18           -------   tgttttatcttttgttacttactagtaatgtcaattttctatgcttttatatgaataagaaaacgcaatgtgcccaactcaaatagagaaacatcacaaa  5313700                                                 =========================HOX2a_HOX2a                                                 =================HOX2a_HOX2a                                                 ------>ZmHOX2a(2)                      --------->AtLEC2          ==================HOX2a_HOX2a                    ---------->DOF2             <------ZmHOX2a(2)                 --------->ANAC58               --------->CCA1(2)                 --------->ANAC55(2)            ==========================HOX2a_HOX2a                 --------->ANAC55(1)           <---------ARR11(3)                 <---------ANAC55(2)           --------->ARR11(3)                 --------->ANAC46              <---------AGP1                ----------->GT1                 --------->ANAC58              --------->AGP1              ---------->DOF2       ----          --------->ANAC58                     <-----------ARR10        --------->YAB1           <---        ---------->DOF2                    ---------->DOF2         ------>ZmHOX2a(1)             ---- --->DOF2 --------->ANAC58             <---------YAB1      ------>ZmHOX2a(1)--------->DAG2       <---   gcacataaaacaaagcaaaacgtaatgcaaaatttcttcttatgacaaagatctaagtctcctcgtctcctctctcataaagtgaaatttgaaattgcat  5313800                                                                      <---------ARR14(2)                                                                   <---------ANAC46                                                                 <-----------HVH21  --------->ANAC58                                           --------->ARR14(2)  --------->ANAC46                                           <---------ARR14(2)       <----------DOF2  --------->ANAC58                                       --------->AHL20(2)           <---------DAG2 ------->TEIL                      <----------DOF2       <---------AHL20(2)          <---------DAG2 --->MYC2                          <---------DAG2    --------->AHL20(2)      ------->TEIL  --------->YAB1 ----MYC3                   --------->GLK1(2)       <---------MYB52(1)--------->ARR14(2)  <---------YAB1 --->MYC3              ---------->DOF2      <---------AHL20(2)   --------->LBD16  --------->REM1(1) ----MYC2xxxxxxxxxxxxxxxxxxxx>smallRNA(le3) --------->AHL20(2)  --------->ANAC46  <---------ALFIN1   atgcacccaaaaaaaaaaaaaaaaaaaaagaatccaactttttcaataaaatccattaattaatatccgtcgtatattgaatctacacctttttcatagt  5313900                            <-----------HVH21                           <----------DOF2                           ------>ZmHOX2a(1)                     <------ZmHOX2a(1)              -----                       --------->ARR14(2)                       --------->ICU4                  -----                --------->At5g28300                             ----------->GT1                 -----               ----------->GT1                           ---------->DOF2                        -----      ------->GAMYB    <---------ARR14(2)    --------->YAB1  ---------->DOF2       ---------->DOF2   tttgacaacgaaattagcagtaacaaatcctttcacatctcacaaaaacataatcagacaaaagaaaggattaaacaaaatcagacaaaggagttaacat  5314000                                             --------->ANAC58                                            <------NtERF2                                           ------>NtERF2                                          ----------->HVH21            ------>NtERF2                                         --------->RAP2.3(1)           <---------At4g35610                                        --------->LBD16                --------->At4g35610                                        --------->ANAC46               --------->ZAT2                                       <---------ATERF1(2)             <---------ZAT2                            <------ZmHOX2a(1)--------->ANAC58         --------->ARR14(2)                          --------->ALFIN1--------->DEAR3(1)          <---------ARR14(2)      <------     <---------LBD16     <------ZmHOX2a(1)<---------DEAR3(1)         <------NtERF2     --------->REM1(2) <---------ATHB12     --------->SPL7   --------->ATERF1(2)          <---------ATERF1(1)<---------ZAT14 ---->ANAC58        <---------SPL7   --------->MYB52(1)             --------->LBD16    --------->ZAT14 ---->ANAC58       <---------ANAC46  -------->P---------->DOF2    <---------LBD16--------->MYB52(1) ---->AtLEC2       <---------ANAC58--------->MYB46(3)    ----------->GT1<------NtERF2 --------->ALFIN1 ---->ANAC46       <---------ANAC58<---------MYB52(2) ---------->DOF2--------->ATERF1(1) *TSS <------   gcaataactcggaaatttgaggcgtaaggaggagcaaactaccggcgacgaaagagaaaaggagaatagccggagccgagaagtaactgtgtagcgattt  5314100                                                                       <---------ANAC55(2)                                                                       --------->ANAC58                   --------->ANAC46                                    --------->ANAC58                   <----------ID1                   --------->CCA1(2)  --------->ANAC46             <-----------TBP                       ----------->HVH21   --------->ANAC55(1)        <--        <------ZmHOX2a(1)             --------->DOF5.7(2)              --------->ANAC55(2)      -----      <---------TOE2(3)---------->DOF2<---------MYB52(1)       <-----------TBP           --------->REM1(1) ----DOF2   --------->ARR11(3)       --------->TOE2(3)    --------->PCF2      <---------YAB1    <---- -----TBP   <---------ARR11(3)       --------->TOE1(3)    <---------ZAT18     <-----------RAV1(1)----   atagggtttaggaagatttataggccaaagacgaggcaacgttagcaaatggagagacagggcccatttatacacgtattatgttgggcctacatccaca  5314200                                          <----------DOF2                                      ---------->ID1             <------MYB46(1)      ------>ZmHOX2a(2)                        ----------->GT1             <------MYB83 --------->At4g35610  --------->ZAT6            ---------->DOF2 ---------HVH21           <---------At4g35610<-----------GT1     <---------ANAC46 -->MYC3    <---------MYB46(3)    <---------ICU4                 <---------ANAC58 ---MYC3   --------->ALFIN1     <---------ARR11(3)               <---------ANAC58   --------->AHL20(2) ----->TGA1a--------->MYB55(2)  --------->ARR11(3)           <----------DOF2 ----------->HVH21 <-----   tgtcagtaatcgagtgggtgattctgacatctgtgatcttgacgctttaacactctgtctgttcttttcgtataagaaagtgacatatatatagagagga  5314300                        --------->ATHB12                        --------->ATHB51                       <---------YAB1                    <---------AHL20(1)                    <---------AHL20(2)                    --------->AHL20(1)                    --------->AHL20(2)                 <---------AHL20(2)                 --------->AHL20(1)                 --------->AHL20(2)                --------->AHL20(2)         <---------YAB1                <---------AHL20(2)      <---------------AGL15            <---------MYB52(1)             <---------AHL20(2)         --------------->AGL15           <----------DOF2            <---------AHL20(2)         --------->TOE2(3)      <-----------RAV1(1) -ZmHOX2a(1)--------->AHL20(2)       <-----------GT1         <---------TOE2(3)                     <-   acaattcatctaaattaaataatttattattgaaaattttaacttaatatagtttttttgtataatgttgtttcctttagtcttcattttttcttaagtt  5314400                                                             --------->HSFB2a(2)                                                <----------DOF2                                      <---------ANAC58       <---------HSFB2a(2)                                      <---------ANAC58    ------->TEIL                             --                                  <----------DOF2        <---------CCA1(2)                         <-      --------->AHL20(2)----------->GT1        <---------ANAC58                     --------->TOE2(3) ----------GT1         <---------ARR11(3)      <---------ANAC58                    ----------->GT1 --   atttccattttaaaaaacataccaatatgttatattctttgcttaaattgctttaacctgtatctagaaaatgtaatcttccatattgttaatttcataa  5314500                                                                                             <------MYB83                                                                                             <-------                                                                                             <------MYB46(1)                                                                                             <-------         <---------AHL20(2)                                                                  <-------        <---------AHL20(2)                                                                  <--------        --------->AHL20(2)                                                                  ---------    --------->AHL20(2)                                                                     --------->ALFIN1    --------->AHL20(1)                                                                   <---------ANAC46    <---------AHL20(1)                                                                   <---------ANAC58    <---------AHL20(2)                                                                   <---------ANAC58   <---------AHL20(2)                         <-----------RAV1(1)             <---------ANAC58   --------->AHL20(2)                        <---------TOE2(3)                <---------ANAC55(1) ------->AHL20(2)   --------->ATHB12       <---------AHL20(2)                 <---------ANAC46      < --------AHL20(2)--------->ANAC58         --------->AHL20(2)                  <---------ANAC58 ------ ------->AHL20(1)--------->ANAC58----------->GT1            ----------->GT1 <---------AHL20(2) <-----   ataaaataaatttttttgcaagttattggaaaacgaagttaaaaattaatgctgcaccaagtttgtgaaattttaaaattacttgtagttggagtgggtg  5314600  Previous    Next  AGI:  At1g15460.1    Description:  ATBOR4/BOR4; anion exchanger. Identical to Boron transporter-like protein 2 [Arabidopsis Thaliana] (GB:Q9XI23); similar to anion exchanger [Arabidopsis thaliana] (TAIR:AT4G32510.1); similar to BOR5, anion exchanger [Arabidopsis thaliana] (TAIR:AT1G74810.1); similar to anion exchange protein family [Arabidopsis thaliana] (TAIR:AT5G25430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65611.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46031.1); contains InterPro domain Bicarbonate transporter, eukaryotic; (InterPro:IPR003020); contains InterPro Range:  from: 5309996    to: 5314089    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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