Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                    -                                                                                                    <                                                                                                   --                       --------->LBD16                                                             --                       ----------->GT1                                                             --                     <---------------------WRI1                                               -------                     <---------LBD16                                                          -------                  --------->YAB1                                                            ---------                 <---------ATHB12                                                      <---------ALFIN1           <---------LBD16                  ---------->DOF2                           ------>MYB83 --          <---------ANAC46          <---------ANAC58           --------->WOX13(1)     ------>MYB46(1)          ----------->RAV1(2)       <---------ANAC58         <---------YAB1    <-----------HVH21   --   gaattttgaattacctggaatcatgcggagaaaacaaggcttgagggaaagtacttggatgttgtcattcaatttatgccccttcacctacacattaagc  5264500         --------->ICU4      <---------YAB1      --------->AHL20(2)      <---------AHL20(2)     <---------AHL20(1)     --------->AHL20(2)     --------->AHL20(1) ---------MYB55(2) -------->MYB46(3) ---------ATHB12 ---->MYB46(1)--------->WOX13(1) ------>P<---------YAB1 ------->ANAC58 -->ANAC58<---------ICU4                           <---------WOX13(1) -->ANAC58--------->YAB1                         --------->ATHB12                            -------- ->DOF2--------->YAB1  <----------DOF2      <---------YAB1              <---------DAG2       <------MYB46(1) ------->ANAC58<-----------HVH21           <---------TOE2(3)            --------->TOE2(3)    <------MYB83 ---->MYB83 <---------YAB1            --------->MYB52(1)              <---------ARR11(3)    <--------   caaccaatataattatcagtcatgtcttttttgatgaacaaaactgatgtttgattgatataaacttgagaataccttatgggagagagaatagttggtg  5264600                                             --------->ARR11(3)                                            --------->YAB1                                            <--------ATHB1                                           --------->ICU4                                      <-----------HVH21                                     <---------ANAC55(2)                                         ----                                     <---------bZIP60(1)                                      -------                                     --------->ANAC58                                         <------                                     --------->ANAC58                                   --------->SPL7                                     --------->bZIP60(1)                                --------->SPL1(2)                                     --------->O2                                      <---------SPL1(1)                  <---------At4g35610<---------TGA1a                                   --------->SPL1(1)                  --------->At4g35610--------->ANAC46       <---------HSFC1(2)        <---------SPL7     --------->ANAC58                <---------O2           <---------HSFB2a(1)      <---------ANAC58     --------->ANAC58    ---------->DOF2   <---------ATHB12 --------->HSFC1(2)       <---------ANAC58 --->GT1      <-----------HVH21      --------->TGA1a  --------->At4g35610   <---------ANAC55(2)<----- -MYB46(3)   --------->O2======================bZIP_DOF     --------->HSFB2a(1)      <---------ANAC46   aaatggcaagtctcaacgtgagatgctaaaagccttctcacgtcaatgattttgtcagtagaaactcccttgagtatcacttgagtttcgtacggagtgg  5264700                                                                                            <--------                                                                                           ----------                                                                                          <---------WOX13(1)                                                                                         <---------AtLEC2                                                                   <----------DOF2       <---------ANAC58 ------->HVH21            ----------->RAV1(1)                      <---------MYB52(1)<----------DOF2 -->ALFIN1<-----------GT1 --------->MYB52(1)                 <----------DOF2         <---------MYB52(1) ---AtMYB61            ------>NtERF2                      ------>ZmHOX2a(1)    <---------GLK1(1) <--- ----MYB46(3)     <---------LBD16 <-----------GT1  <---------CCA1(2) <-----------RAV1(1) <---------ANAC58   tgactgtgatttcaaccagactcggagccaacagtttatcgtctctcttcttcttatctcctcctttccctttgttgtttgatttccctttgcttgacct  5264800                                                                                                    <                                                                                                    <                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                  <--                                                                                                <----                                                                                                <----                                                                       --------->DAG2          ------  <------NtERF2                                                       ---------->DOF2          ------ --------->ABI4(2)                                            ----------->GT1                  ------ ------>NtERF2                                            ---------->DOF2       --------->WOX13(1)<-- -WRKY18(1)                                      <------ZmHOX2a(2)  --------->AHL20(2)         ------ ->HVH21  ------>ZmHOX2a(2)                     --------->ARR11(3)  --------->YAB1            <------ ------DEAR3(1)                                 <---------ARR11(3)  <---------AHL20(2)        <------   cggtgccattgatcccccttcatccaattacacacacatatacaataagagatcactatctaaagagtaataaaaagtgagtcaatccagacagaggtag  5264900     <---------ANAC46 ------MYB46(1) ------MYB83 ------->MYB111(2) ------->MYB46(2)            --------->ARR11(3) ------->MYB111(1)      --------->YAB1 ------->MYB59         <---------ATHB12 -------MYB55(1)      --------->ANAC58 --MYB83             --------->WOX13(1) --MYB46(1)   --------->At4g35610 --->MYB111(1)--------->ZAT2 --------->GLK1(2) --->MYB46(2) <---------ZAT2<---------GLK1(2)                               ----------->GT1 --->MYB59 --------->At4g35610                                              <----------ID1 ------P   <---------At4g35610                     ----------->GT1        ---------->DOF2 --->MYB111(2)<---------At4g35610                 --------->DAG2--------->CCA1(2) --P --------->TOE1(2)--------->ANAC58          ---------->DOF2--------->ARR11(3)     <------ZmHOX2a(1) ---MYB55(1) ----------->RAV1(1)     *TSS   ---------->DOF2    <---------ARR11(3) ---------->DOF2   gtaggtaccttggagcagcagagcaatcaagaatcttgagccttgagaaagaaaggtgaagagaagatatataacaaaaagaaaaaaaggataagggttt  5265000                                      ----------->RAV1(2)                                     <---------ATHB12            <---------CCA1(2)                                    ------>MYB46(1)         --------->ANAC46                                    ------>MYB83            --------->ANAC58                                    <---------ARR14(2)      --------->ANAC58                                 ------------>CBF         <---------DOF5.7(2)                                 --------->MYB46(3)       --------->MYB52(1)            -------------             <----------DOF2   <-----------GT1          --------->DOF5.7(2)             <------------          --------->ZAT6    --------->YAB1              <---------MYB52(2)       --------->ZAT6    --     <-------GAMYB        <-----------TBP            ---------->ID1    <----------DOF2 <-------------    ----------->GT1    <---------TOE2(3)------>ZmHOX2a(1) ---------->DOF2  <-----------GT1    -------   tggatggggttaacactttggttttgagatttataaccaatcctggcctctccttgtcgctaacgccaaatctcttttttctatctctatctcttattag  5265100                                                                                                    -                                                                                                   --                                                                                                <----                                                                                               ------                                                                                              -------                                      --------->YAB1                                          -------    <---------ANAC55(1)               <-----------GT1         --------->ANAC58                <------ -->AGL15                          --------->YAB1             --------->ANAC58                <------ ---AGL15                        --------->AHL20(2)           --------->AtLEC2              --------- --------->GT1              <---------TOE2(3)       --------->YAB1                     <---------MYB46(3) ----AGL3                  ---------->DOF2         <---------ATHB12                --------->ALFIN1<- -->YAB1                --------->TOE2(3)        --------->WOX13(1)                ----------->HVH21-   aacgttacatgtgattttgatgttcacattaaagttttaataacaatactccaatcacagtctcatgcaattcgaccgagacgaggtgatggttcagatt  5265200    <-------MYC4    ------->MYC4    ------->MYC2    <-------MYC2    ------->MYC3    <-------MYC3    ------->PIF5    <-------PIF5   --------->ANAC46   ==================================================bZIP_DOF   <---------O2   --------->O2   --------->TGA1a   <---------PIF3(3)   --------->PIF3(3)               ----------->HVH21   <---------TGA1a         <---------MYB46(3) <---------ALFIN1         <---------ANAC46 -------->DEAR3(1)        --------->ALFIN1 --------------->PIF3(1)<---------MYB46(3)                                               --------->MYB52(1) ---TEIL               <---------DEAR3(1)                                               <---------WRKY38(1) --->ARR14(1)          <---------AtMYB61                                               <---------ATHB12 -->ARR14(2)         <---------MYB46(3)                                               --------->ANAC58 -->ARR11(1)        <---------AtMYB61                                                 --------->ANAC58 ---GLK1(2)         --------->ALFIN1                                           --------->YAB1 ---ARR14(2)   --------->YAB1  --------->ZAT18                               --------->AHL20(2) -->ARR10     <---------YAB1<------NtERF2               <---------MYB52(1) <----------DOF2         <- ---------------PIF3(2)--------->ALFIN1          <---------ATERF1(1) --------->ANAC46--------->WOX13(1) --------------->PIF3(2)--------->MYB55(2)<----------DOF2          <-----------GT1--------->YAB1   --   cgcccacgtggcaactatgagagtggtggtggggacactgacctctttgtccgactccgttttgtttgtttacgcttcttttaataacaatcaacggttc  5265300                      <---------------AGL15                                 ------>MYB83                      <----------DOF2------>MYB83                           ------>MYB46(1)                     <-----------------AGL3                               <---------MYB111(1)                  --------->ZAT14    ------>MYB46(1)                      <---------MYB111(2)               <---------ANAC46     <---------ALFIN1                   <---------ALFIN1             <---------ZAT14       <---------MYB55(2)               --------->MYB46(3)             --------->ZAT14       --------->MYB46(3)             --------->ANAC46      --------->At4g35610     <-----------HVH21                 --------->MYB46(3)      <---------At4g35610   <---------ZAT6                      <---------MYB52(2) --------ARR14(2) <---------ZAT18 --------->ANAC58            <-----------GT1                   ----- ------->ARR14(2) <---------ZAT14 --------->ANAC58    <----------DOF2--------->AtMYB61   --------->ZAT14   gaatcgtctgctcactgcagtgtgcttttagtggtcacccactcgaagtcaattgtcttttttttaacaaaccacacctacttaatgtctctatacacat  5265400  Previous    Next  AGI:  At1g15290.1    Description:  binding. similar to binding [Arabidopsis thaliana] (TAIR:AT4G28080.1); similar to tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] (TAIR:AT1G01320.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72877.1); similar to hypothetical protein OsJ_015675 [Oryza sativa (japonica cultivar-group)] (GB:EAZ32192.1); similar to hypothetical protein OsI_017020 [Oryza sativa (indica cultivar-group)] (GB:EAY95787.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratricopeptide TPR2 (InterPro:I Range:  from: 5257041    to: 5264937    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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