Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      <-----------RAV1(2)                                                                                --------->At4g35610                          --------->ANAC46                                      <---------At4g35610                 <---------ARR14(2)           ----------->GT1                 <------NtERF2                 --------->ARR14(2)        <---------AtLEC2                   <-----------RAV1(2)            ------------>AtMYB77      --------->At4g35610                    --------->LBD16            --------->MYB52(1)   <---------TGA1a                             ------>NtERF2            ===============================MYC_MYB                           <---------At4g35610          <---------ABI4(2)    <---------ALFIN1                            <---------RAP2.6(2)<------       ====================================bZIP_DOF                        <---------LBD16<---------KAN4(2)       ---------->DOF2--------->ANAC46<---------At4g35610            <---------YAB1<-------TEIL ---------HVH21 <-----------HVH21--------->TGA1a    --------->AHL20(2)    xxxxxxxxxxxxxxxxxx>smallRNA(se3)   tgtcatttccaaagcaccggttacacataagtcacacatgagcttacatggaaaaaaaatgccaatagattaccattgccgcagatgcaggggatgatca  5249400                            --------->LBD16                            <---------HSFB2a(2)                            --------->HSFB2a(2)                          <------NtERF2                         ------>NtERF2                        --------->ARR14(2)                        <---------ARR14(2)                       <---------At4g35610                           *TSS             <---------MYB46(3)                       --------->ATERF1(1)                          --------------->AGL15                      <---------RAP2.3(1)                          <-----------------AGL2                      <---------RRTF1(1)                           ----------------->AGL2                      <---------ATERF1(1)                          <-----------------AGL3                     <---------ANAC58                  <---------TOE1(3)           <------------CBF                     <---------RRTF1(2)                <---------TOE2(3)     <---------ARR14(2)                     <---------ANAC58               <---------MYB52(1)       --------->ARR11(3)                     <---------RAP2.3(3)           ------>ZmHOX2a(1)<---------------AGL15    ------>NtERF2                     <---------RAP2.3(2)           <----------DOF2 <-----------------AGL1   ---------                     <---------RAP2.6(2)           ===================================HOX2a_HOX2a                    <---------LBD16            <---------ZAT18    ------>MYB46(1)<---------YAB1                 <----------DOF2              <---------ANAC58    ------>MYB83 ------>ZmHOX2a(2)                <---------ICU4                <---------ANAC58    -------->P ------->TEIL <---------At5g28300              <---------ARR11(3)          --------->ZAT14        =====================HOX2a_HOX2a              --------->ARR11(3)          <---------ZAT14        ------>ZmHOX2a(1)--------->ATHB12             <---------GLK1(1)            --------->REM1(2)   <-----------GT1--------->ARR14(2) ---YAB1     --------->GLK1(1)           --------->ALFIN1    <-----------GT1 <---------ARR11(3)   aagtttgctctacagaaatctttgcggctccgagaagacgactgtgtagcgtcctttagggtttttcctacccaaaatggatcttcattggttaccgcca  5249500                                                                                                    <                                                                                                    -                                                        ------->GAMYB                               <                                                      <---------At4g35610                       <----                                                      <---------ZAT2                        <--------                                                      --------->At4g35610                  --------->ALFIN1                                                      --------->ZAT2                    --------->ALFIN1                                                    <---------ZAT14          <---------YAB1<---------AtMYB61                                                    <---------WRKY12    <---------AHL20(2) <---------DEAR3(1)                                                    <---------WRKY38(1)--------->AHL20(2)<---------MYB46(3) --------->CCA1(2)                        <-----------GT1       ----------->GT1         <---------AtMYB61 >ANAC46            <----------DOF2 <---------YAB1  --------->ZAT18 <-----------TBP  --------->ATHB12   aaaatatgggcttcttaatgggcttcatgggcctggttctgatattacctcgagtcaactggcatacagtatatataatatgagtagtgagtggtggtgg  5249600                                                                   --------->ZAT18                                                                   <---------ZAT18                                                              ---------->DOF2                                                         <---------------AGL15 --------->YAB1                                          --------------->AGL15 --------->YAB1 ---------ATHB12                                    <---------ANAC58      ------------>CBF -------->ICU4                                 --------->ATHB12--------->DAG2 <---------ATHB12 ---------YAB1                                <---------YAB1 --------->YAB1  --------->ANAC58 --NtERF2                --------->ZAT6    ----------->TGA1 ----------->TBP  --------->ANAC58 -MYB46(3)  <---------PCF5        <---------YAB1    <---------ANAC58   ----------->RAV1(1)         --   caatgataagtaggggaccaattttgaacactgcttatcaatgtgatgacgattgcttacctataaaagtggacaacacaatcaacaagatgacaccttc  5249700                     <---------ANAC58                     <---------ANAC58                    <------MYB83    ------>ZmHOX2a(2)                --------->At4g35610             <---------ATHB12       --------->ARR11(3)                --------->ZAT2        --------->ANAC58   <------MYB46(1)<------ZmHOX2a(2)      <-----        --------->ZAT6                --------->ANAC46  --------->MYB59<---------ARR11(3)      ------     ----------->HVH21        --------->MYB46(3)------------>CBF      <---------GLK1(1)   <---------YAB1 -------->DOF2  <---------At4g35610   --------->ANAC58 *TSS     <----------DOF2           <---------TOE2(3)   ttaaagtctgacactatcagcttgcttcttcaactactacatgccactaaatcaatgttaggtttccttttgagatccctagtgacataaatatggttat  5249800                                                                  <---------MYB52(1)                     ---------->DOF2   --------->TOE2(3)        <---------MYB46(3)                   --------->ANAC58   --------->REM1(1)      <------MYB46(1)                      <--      --------->AHL20(2)     <---------YAB1                  <------MYB83                         <-- ----ARR11(3)      --------->ANAC58  ------>MYB83           <---------AtMYB61                     --- --->ARR11(3)--------->At4g35610     ------>MYB46(1)       <--------P   ---------->DOF2           ---   cttctcaaaaaaatgagcagcaagaaagatgatgaaacctacatcaaaatcaattcagagagttggtcgtttcttaaagaagactcttgggagcatcaag  5249900                                                                               <---------HSFB2a(2)                                                                         --------->At4g35610                                                                         <---------At4g35610                                                                         ------>NtERF2                                                                        --------->RAP2.3(2)                                                                        --------->DEAR3(1)                                                                       <------NtERF2                                                                       --------->DEAR4(2)                                                                       --------->ATERF1(1)                                                                       --------->RAP2.3(1)                                                                      <---------DEAR4(2)                                                                      <---------RAP2.3(1)                                                                      <---------ATERF1(1)                                                                      ------>NtERF2                                                                     --------->ATERF1(2)                                                                     --------->RAP2.6(2)                                                                     --------->RAP2.3(2)                                                                     --------->RAP2.3(3)                                                                     --------->ANAC46                                                                     <---------ATERF1(2)                                                                     ------->GAMYB   <---------GLK1(2)                                                                     --------->DEAR3(1)                                            ------>ZmHOX2a(1)       --------->RAP2.6(1)                                        --------->ANAC58            --------->ATERF1(1)                                      <---------ALFIN1              --------->DEAR3(2)                                   --------->ANAC46                 --------->RRTF1(1)                                   --------->ANAC58                 --------->MYB46(3)                                   --------->ANAC58                 --------->RAP2.3(1)                                 ------>MYB83                       --------->ERF1   --------->ARR14(2)                                 --------->MYB52(1)                --------->ZAT2    <---------ARR14(2)                                 ------>MYB46(1)                   <---------At4g35610         <----------DOF2        --------->MYB55(1)                 <---------ZAT2    --------->KAN4(2)       --------->At4g35610     <---------MYB111(1)                 --------->At4g35610   --------->ARR14(2)          <---------MYB46(2)                  ------>NtERF2    <---------HSFB2a(1)   <---------ARR14(2)          <---------MYB52(2)                  <---------ATERF1(1) -------ZAT14                 --------->ANAC55(2)               <---------At4g35610 --------->HSFC1(2) -------ZAT18  <---------ICU4 <---------ANAC55(2)              ------>ZmHOX2a(1)    --------->HSFB2a(1) ------>ZAT14  --------->ATHB12<---------MYB59               ----------->RAV1(2)    <---------HSFC1(2) ------>ZAT18 --------->ICU4 -------->P --------->ANAC58<---------MYB52(1)     --------->HSFB2a(2)   tccactatctgctctagtgattacaaaaacttacctaacgacactcctctcttgagcccttactcctgcagccgccgctgtccagaagattcccaaaccc  5250000                                                                                  ---------->DOF2                                                                              --------->TOE2(3)                                                                            ------>MYB83                                                     --------->ANAC58       ------>MYB46(1)                                               <-------TEIL                ----------->RAV1(1)                                              --------->CCA1(2)           --------->AtMYB61                                             <---------ARR14(2)           ------->GAMYB                                       --------->ALFIN1                  --------->MYB46(3)                                     <---------MYB46(3)                  <---------MYB52(2)                                     --------->ALFIN1--------->ANAC46   --------->ANAC46                  --------->DOF5.7(2)<-----------RAV1(1)                --------->ANAC58             --------->REM1(1)   --------->ANAC58    --------->ANAC58   --------->ANAC58             <---------ALFIN1    --------->ANAC58   ------->GAMYB      ------->GAMYB   --------->MYB52(1)        --------->ANAC58       <---------bZIP60(2) <---------ALFIN1   --------->MYB46(3)        --------->ANAC58    ----------->HVH21--------->ARR14(2)       <---------MYB55(2)      ---------->DOF2  <-----------RAV1(1)  --------->At4g35610       <---------MYB111(2)  ---------->DOF2 <---------MYB52(1)<---------DEAR3(1)----------->RAV1(1)<---------MYB55(2)    ------   aaaccaaagaaagctacaccgttatctgttgtgacacggctgtggcagatacaacacaccagaagagtctcaacaaccaacataaaaagaaaccgaagaa  5250100                                                                                      --------->ALFIN1                                                                                    --------->O2                                                                                    =================                                                                                    <---------ANAC58                                                                                    <---------ANAC58                                                ---------->DOF2                     <---------bZIP60(2)                                                ==============================================bZIP_DOF                                              <------NtERF2                 ------>ZmHOX2a(2)--------                                            <---------ANAC46               <---------At4g35610                                           <------NtERF2                  <---------AGP1     <-------                                         <---------DEAR3(1)               --------->ARR14(2) --------                                    <---------ANAC46         ------>ZmHOX2a(2)      <---------TGA1a                                   <-----------------------TaNAC69(2)     <---------ARR11(3) --------                                 ----------->HVH21          <------ZmHOX2a(2)       <---------ANAC46                                 ----------->TGA1          --------->ARR11(3)       --------->TGA1a                                <-----------HVH21          <---------ARR11(3)       <---------O2  <----------CDC5         ---------->DOF2--------->ALFIN1  <---------AGP1 <---------ARR14(2) -------- --------->At4g35610 ---------->DOF2<---------bZIP60(2)---------->DOF2  <---------MYB46(3)<------ZmHOX2a(2) ---->DOF2      <------ZmHOX2a(1)--------->ALFIN1      =======================================bZIP_DOF   agtcgctgagccattcgaggatgcaaagaaaagaggtgacgcgttggcgcaaaagatgaaagatctcaatatggtggatctgagagacgtggatcacgca  5250200                                                 --------->ARR11(3)                                            ------>ZmHOX2a(1) ==========================bZIP_DOF         <---------ANAC46 ->ANAC55(2)                      --------->At4g35610                                               - --ANAC55(2)                  --------->ANAC58   --------->ARR14(2)                                 < ->ANAC46                     --------->ANAC46   <---------ARR14(2)                      <---------ANAC55(1) ->ANAC58                     --------->ANAC58   ------->TEIL            <---------REM1(2)    <------ ->ANAC58       <----------DOF2 --------->YAB1  <---------CCA1(2)    <---------ARR11(3)<-----------GT1   ttggatgtaagggaagcgcttcgatgctattcaagcatcagaagtcctgtgtatcttgacattgttgacaatttcttcacagacatgtattacgagttct  5250300  Previous    Next  AGI:  At1g15250.1    Description:  60S ribosomal protein L37 (RPL37A). Identical to 60S ribosomal protein L37-1 (RPL37A) [Arabidopsis Thaliana] (GB:Q8LFH7); similar to 60S ribosomal protein L37 (RPL37C) [Arabidopsis thaliana] (TAIR:AT3G16080.1); similar to unknown [Populus trichocarpa] (GB:ABK95278.1); similar to unknown [Populus trichocarpa] (GB:ABK93027.1); contains InterPro domain Ribosomal protein L37e; (InterPro:IPR001569); contains InterPro domain Ribosomal protein L37ae/L37e, core; (InterPro:IPR011331); contains InterPro domain Ribosomal protein, zinc-binding; (InterPro:IPR011332) Range:  from: 5248659    to: 5249469    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g15260.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G16070.1) Range:  from: 5249755    to: 5250568    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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