Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             --------->ANAC46                                                           --------->ANAC58                                                        --------->At4g35610                                                     --------->At4g35610                                                     <---------At4g35610            --------->ARR14(2)                --------->ZAT14                  <------ZmHOX2a(1)            <---------ARR14(2)                <---------ZAT14               <---------LBD16       ------>MYB83                         --------->ANAC46       --------->YAB1           ---------       ------>MYB46(1)        <---------YAB1--------->ANAC58     <---------ARR11(3) <----------DOF2       -------->P      --------------------->WRI1 <---------MYB52(1)  --------->AHL20(2)   <---------CCA1(2)      ------>ZmHOX2a(1)<----------DOF2      --------->ANAC58 --------->ANAC46--------->LBD16<-------- ------->TOE2(3)------>ZmHOX2a(1)         --------->ZAT6--------->ZAT14     <---------HSFB2a(2) ----ARR14(2)   <-----------RAV1(1)       <---------ALFIN1 --------->ANAC58 --------->HSFB2a(2)   acctcatcctaccagttcctgttgtctttcttcttattgccttcacactccagttatctgcacacaaaatcataaattccaggactctttcatatatctc  5249100                                                                                          <-------PIF4                                                                                          <-------MYC2                                                                                          <-------MYC4                                                                                          <-------PIF5                                                                                          ------->PIF5                                                                                          ------->MYC2                                                                             <------NtERF2------->MYC3                                                                             <---------At4g35610                                                                             --------->At4g35610                                                                             <---------ZAT2                                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                                    <----------DOF2  --------->ANAC58                                                                  ------>ZmHOX2a(1)  --------->ANAC58                                                                 <-----------------AGL1   ------->PIF4                                                          <-------TEIL       --------->ZAT2     -----        --------->YAB1     --------->ANAC46           <-------TEIL<---------------AGL15   <-------MYC3 >ARR11(3)                 --------->ANAC58       <---------------AtSPL8--------->HSFB2a(2)     ----- -ARR11(3)                 --------->ANAC58       <---------------AtSPL3<---------HSFB2a(2)    ------   caattctccatgatcagacccaaaattccaagacagagacagaaatagagagagagtacatacatgtcctctttctggcagctggataagcacatgccga  5249200                                <---------ALFIN1                                --------->AtMYB61                            --------->DEAR3(1)                            ----------->HVH21                            <---------ETT(2)                           --------->ATERF1(1)           <---------ANAC58                          --------->LBD16                <---------ANAC58                          <---------ATERF1(1)         ----------->HVH21                          ------>NtERF2             --------->ALFIN1          <---------HSFB2a(2)<---------ATERF1(1)  --------->ALFIN1          --------->HSFB2a(2)------>NtERF2      <---------ANAC46 --------->MYB46(3)      <---------DEAR3(1)     <---------ANAC58 ---->ANAC58      ---------->DOF2               <---------ANAC58    ------>ZmHOX2a(1) ---->ANAC58    ----------->HVH21     ----------->HVH21  <---------ANAC46  ---------->DOF2        <-- >NtERF2 <---------LBD16<---------LBD16    --------->ANAC46      ------>ZmHOX2a(1)        <----------DOF2   gcaacgactcttctggatgtgaaagctccggcgaccacatctcacacagagcgtgtgtgacttgttcctcctcttaccaaagctccctgttcctttaccc  5249300                                                                                    <-----------RAV1(2)                                                                                --------->At4g35610                          --------->ANAC46                                      <---------At4g35610                 <---------ARR14(2)           ----------->GT1                 <------NtERF2                 --------->ARR14(2)        <---------AtLEC2                   <-----------RAV1(2)            --------->MYB52(1)        --------->At4g35610                    <---------At4g35610            ------------>AtMYB77 <---------TGA1a                             ------>NtERF2            ===============================MYC_MYB                           --------->LBD16          <---------ABI4(2)    <---------ALFIN1                            <---------RAP2.6(2)<------       ====================================bZIP_DOF                        <---------LBD16<---------KAN4(2)       ---------->DOF2--------->ANAC46<---------At4g35610            <---------YAB1<-------TEIL ---------HVH21 <-----------HVH21--------->TGA1a    --------->AHL20(2)    xxxxxxxxxxxxxxxxxx>smallRNA(se3)   tgtcatttccaaagcaccggttacacataagtcacacatgagcttacatggaaaaaaaatgccaatagattaccattgccgcagatgcaggggatgatca  5249400                            --------->LBD16                            <---------HSFB2a(2)                            --------->HSFB2a(2)                          <------NtERF2                         ------>NtERF2                        <---------ARR14(2)                        --------->ARR14(2)                       <---------At4g35610                           *TSS             <---------MYB46(3)                       --------->ATERF1(1)                          --------------->AGL15                      <---------RRTF1(1)                           <-----------------AGL1                      <---------ATERF1(1)                          <-----------------AGL2                      <---------RAP2.3(1)                          <-----------------AGL3                     <---------ANAC58                  <---------TOE2(3)           <------------CBF                     <---------RAP2.6(2)               <---------TOE1(3)     --------->ARR14(2)                     <---------RAP2.3(2)            <---------MYB52(1)       <---------ARR11(3)                     <---------RRTF1(2)            ------>ZmHOX2a(1)<---------------AGL15    ------>NtERF2                     <---------RAP2.3(3)           ===================================HOX2a_HOX2a                     <---------ANAC58              <----------DOF2 ----------------->AGL2   ---------                    <---------LBD16            <---------ZAT18    ------>MYB83 ------>ZmHOX2a(2)                 <----------DOF2              <---------ANAC58    ------>MYB46(1)<---------YAB1                <---------ICU4                <---------ANAC58    -------->P --------->ARR11(3)              <---------ARR11(3)          --------->ZAT14        ------>ZmHOX2a(1)--------->ATHB12              --------->ARR11(3)          <---------ZAT14        =====================HOX2a_HOX2a             <---------GLK1(1)            --------->REM1(2)   <-----------GT1------->TEIL <---------At5g28300 ---YAB1     --------->GLK1(1)           --------->ALFIN1    <-----------GT1 <---------ARR14(2)   aagtttgctctacagaaatctttgcggctccgagaagacgactgtgtagcgtcctttagggtttttcctacccaaaatggatcttcattggttaccgcca  5249500                                                                                                    <                                                                                                    <                                                        ------->GAMYB                               -                                                      --------->ZAT2                            <----                                                      <---------ZAT2                        <--------                                                      <---------At4g35610                  <---------DEAR3(1)                                                      --------->At4g35610               --------->ALFIN1                                                    <---------WRKY38(1)      <---------YAB1<---------AtMYB61                                                    <---------WRKY12    <---------AHL20(2) --------->ALFIN1                                                    <---------ZAT14    --------->AHL20(2)<---------MYB46(3) --------->CCA1(2)                        <-----------GT1       ----------->GT1         <---------AtMYB61 >ANAC46            <----------DOF2 <---------YAB1  --------->ZAT18 <-----------TBP  --------->ATHB12   aaaatatgggcttcttaatgggcttcatgggcctggttctgatattacctcgagtcaactggcatacagtatatataatatgagtagtgagtggtggtgg  5249600                                                                   --------->ZAT18                                                                   <---------ZAT18                                                              ---------->DOF2                                                         --------------->AGL15 --------->YAB1                                          <---------------AGL15 --------->YAB1 ---------ATHB12                                    <---------ANAC58      ------------>CBF ---------YAB1                                 --------->ATHB12--------->DAG2 <---------ATHB12 -------->ICU4                                <---------YAB1 --------->YAB1  --------->ANAC58 --NtERF2                --------->ZAT6    ----------->TGA1 ----------->TBP  --------->ANAC58 -MYB46(3)  <---------PCF5        <---------YAB1    <---------ANAC58   ----------->RAV1(1)         --   caatgataagtaggggaccaattttgaacactgcttatcaatgtgatgacgattgcttacctataaaagtggacaacacaatcaacaagatgacaccttc  5249700                     <---------ANAC58                     <---------ANAC58                    <------MYB46(1) ------>ZmHOX2a(2)                <---------At4g35610             ------------>CBF        <------ZmHOX2a(2)                --------->ZAT2        --------->ANAC58   <------MYB83  <---------ARR11(3)      <-----        --------->ZAT6                --------->ANAC58  --------->MYB59--------->ARR11(3)      ------     ----------->HVH21        --------->MYB46(3)<---------ATHB12      <---------GLK1(1)   <---------TOE2(3) -------->DOF2  --------->At4g35610   --------->ANAC46 *TSS     <----------DOF2           <---------YAB1   ttaaagtctgacactatcagcttgcttcttcaactactacatgccactaaatcaatgttaggtttccttttgagatccctagtgacataaatatggttat  5249800                                                                  <---------MYB52(1)                     ---------->DOF2   --------->TOE2(3)        <---------MYB46(3)                   --------->ANAC58   --------->REM1(1)      <------MYB46(1)                      ---      --------->AHL20(2)     <---------YAB1                  <------MYB83                         <-- ----ARR11(3)      --------->ANAC58  ------>MYB46(1)        <---------AtMYB61                     --- --->ARR11(3)--------->At4g35610     ------>MYB83          <--------P   ---------->DOF2           <--   cttctcaaaaaaatgagcagcaagaaagatgatgaaacctacatcaaaatcaattcagagagttggtcgtttcttaaagaagactcttgggagcatcaag  5249900                                                                               --------->HSFB2a(2)                                                                         --------->At4g35610                                                                         ------>NtERF2                                                                         <---------At4g35610                                                                        --------->DEAR3(1)                                                                        --------->RAP2.3(2)                                                                       <------NtERF2                                                                       --------->DEAR4(2)                                                                       --------->RAP2.3(1)                                                                       --------->ATERF1(1)                                                                      <---------ATERF1(1)                                                                      <---------DEAR4(2)                                                                      ------>NtERF2                                                                      <---------RAP2.3(1)                                                                     --------->RAP2.6(2)                                                                     ------->GAMYB                                                                     --------->ATERF1(2)                                                                     <---------ATERF1(2)                                                                     --------->ANAC46--------->KAN4(2)                                                                     --------->RAP2.3(3)                                                                     --------->DEAR3(1)                                                                     --------->RAP2.3(2)                                            ------>ZmHOX2a(1)       --------->DEAR3(2)                                        --------->ANAC58            --------->RAP2.3(1)                                      <---------ALFIN1              --------->RRTF1(1)                                   --------->ANAC46                 --------->RAP2.6(1)                                   --------->ANAC58                 --------->MYB46(3)                                   --------->ANAC58                 --------->ATERF1(1)                                 ------>MYB46(1)                    --------->ERF1   <---------ARR14(2)                                 --------->MYB52(1)                ------>NtERF2     <---------GLK1(2)                                 ------>MYB83                      --------->ZAT2    --------->ARR14(2)         <----------DOF2        --------->MYB55(1)                 <---------ATERF1(1)       --------->At4g35610     <---------MYB46(2)                  --------->At4g35610   <---------ARR14(2)          <---------MYB52(2)                  <---------At4g35610   --------->ARR14(2)          <---------MYB59                     <---------ZAT2   <---------HSFC1(2) ------>ZAT14                 <---------ANAC55(2)               <---------At4g35610 --------->HSFB2a(1) -------ZAT18  --------->ATHB12<---------MYB111(1)             ------>ZmHOX2a(1)    --------->HSFC1(2) ------>ZAT18  <---------ICU4 --------->ANAC55(2)            ----------->RAV1(2)    <---------HSFB2a(1) -------ZAT14 --------->ICU4 -------->P --------->ANAC58<---------MYB52(1)     <---------HSFB2a(2)   tccactatctgctctagtgattacaaaaacttacctaacgacactcctctcttgagcccttactcctgcagccgccgctgtccagaagattcccaaaccc  5250000  Previous    Next  AGI:  At1g15250.1    Description:  60S ribosomal protein L37 (RPL37A). Identical to 60S ribosomal protein L37-1 (RPL37A) [Arabidopsis Thaliana] (GB:Q8LFH7); similar to 60S ribosomal protein L37 (RPL37C) [Arabidopsis thaliana] (TAIR:AT3G16080.1); similar to unknown [Populus trichocarpa] (GB:ABK95278.1); similar to unknown [Populus trichocarpa] (GB:ABK93027.1); contains InterPro domain Ribosomal protein L37e; (InterPro:IPR001569); contains InterPro domain Ribosomal protein L37ae/L37e, core; (InterPro:IPR011331); contains InterPro domain Ribosomal protein, zinc-binding; (InterPro:IPR011332) Range:  from: 5248659    to: 5249469    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g15260.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G16070.1) Range:  from: 5249755    to: 5250568    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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