Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      ------>NtERF2                                                  <------NtERF2                                                 ------>NtERF2                                                <---------ETT(2)                                 ----               --------->ARR14(2)               --------->ETT(2)                             <-------               ------->TEIL                  <---------MYB46(3)                              --------               <---------ARR14(2)          <-------GAMYB                                    <--------               --------->GLK1(2)           <---------ANAC58                         <---------At4g35610               <---------ARR11(1)          <---------ANAC58           --------->TOE2(3) <---------YAB1              <---------ARR14(1)      <---------ANAC58  ---------->DOF2             --------->At4g35610          <-----------GT1             <---------ANAC58--------->MYB46(3)       <------ZmHOX2a(1) <---          --------->MYB52(1)     --------->MYB52(1) ----------->RAV1(1)       --------->ICU4---------   tgatatgtttagtaacgaatcttgtattggagaaataagggcctgggttgtcgccaacaaaagaaggtagagccttagtgaggattagctgtgattaaat  5237700                                                                                  --------->At4g35610                                                                                  <---------ZAT2                                                                                  --------->ZAT2                                                                             --------->DEAR3(1)                                                                             --------->AtMYB61                                                                             <---------ALFIN1       <                                                                          --------->ANAC46          -                                                                         --------->MYB46(3)         -                                                        --------->YAB1  --------->ANAC58            <                                                      <---------YAB1  <---------ALFIN1             <-                                                      <---------AHL20(2)--------->ANAC58    <--------                                                      --------->AHL20(2)--------->ANAC46    <--------                                              <---------ICU4         --------->ANAC46       <--------                                              --------->YAB1       --------->ANAC46         <-------- ----->AHL20(2)                            --------->YAB1       --------->ANAC46  <---------At4g35610 --AHL20(2)                       --------->YAB1     --------->YAB1<---------ALFIN1    <---------At4g35610 ->AHL20(2)                  <---------WOX13(1)    ------->TEIL --------->ANAC58<---------ALFIN1   -- -AHL20(2)                <---------AHL20(2) <---------ATHB12   --------->ANAC58--------->MYB46(3) <- ------AHL20(2)  --------->YAB1   <---------ICU4<---------YAB1--------->ZAT6--------->MYB46(3)     -- >AHL20(2)      <---------YAB1 --------->YAB1--------->ICU4 <-----------GT1------->TEIL--------->At4g35610   tatatacttatacatgctatgatagtatttgattaataatgtcagtaatcatgaatattaataaacactccaccacgcaccaccagctcatatgacttgg  5237800          ------>NtERF2       <---------LBD16       --------->At4g35610       ------>NtERF2       <---------At4g35610       --------->LBD16      --------->ANAC46     <---------LBD16 <---------GLK1(1) ---------ARR14(2) -------->ARR14(2)                                                       ----------->GT1 -------->KAN4(2)                                                        <---------ZAT6 ---------GLK1(2)                                                      <---------ZAT18             -- --------HSFC1(2)                                                      <---------ZAT14          ----- -ANAC58 <---------SPL7                                            <---------------AtSPL8       ----- -ANAC58 --------->DEAR3(1)                                     <---------AHL20(2)      <-------GAMYB -ANAC46 ----------->HVH21                                   <---------AHL20(2)        ----------->GT1 -bZIP60(2)--------->SPL7                               --------->ICU4 --------->ZAT14 <---------MYB46(3) ------->HSFB2a(1)                                   <---------YAB1<---------------AtSPL3  --------->AHL20(2) --------HSFB2a(1)                        ---------->DOF2   --------->AHL20(2)      --------->ALFIN1 ------->HSFC1(2)          ------>ZmHOX2a(1)       --------->YAB1--------->YAB1 <---------YAB1  <----   aagattccccgcggacgggttccctcatcctgtctcgattgtttcaaagtcatttataaatattaaataatagtacagttatatgagtgtggttaaaata  5237900                                                                        <-----------------AGL1                                                                      <-----------GT1                                   --------->AHL20(2)               <---------YAB1                                   <---------AHL20(1)             <---------ICU4                                   <---------AHL20(2)             --------->YAB1                                   --------->AHL20(1)            <---------YAB1                             ----------->GT1                  <---------AHL20(2)                            ----------->GT1                   --------->AHL20(2) --------->YAB1           <-------MYC3                        <---------YAB1                       <- ------->AHL20(2)         ------->MYC3                    --------->AHL20(2)                 ------>MYB83 ---->AHL20(1)         --------->YAB1                     --------->YAB1<-----------------AGL2  ----- ---->AHL20(2)       --------->ANAC58                     <---------AHL20(2)                 ------>MYB46(1) -----AHL20(2)       --------->ANAC58           ---------->DOF2  --------->ICU4            ------->GAMYB   aaataatagacggtccaaaaaacaagcatatgggtaataaattagtgagtttaagcccatttatattattattatccattttaggcccattaacccacta  5238000                                                      <-----------GT1                                                  ------>ZmHOX2a(1)                                                ------>ZmHOX2a(2)                                               <------ZmHOX2a(2)                                              <---------ARR11(3)                      <---------ICU4                                              <---------ARR14(3)             --------->ZAT18      <---------ZAT14                         --------->ARR11(3)        <---------ANAC58           <-      --------->ZAT14                         --------->ARR14(2)        <---------ANAC58         *TSS      <---------ZAT18                  --------->At4g35610   <<<<<<<<<TBF1   <---------ZAT18 -------- --------->ZAT18         <---------ZAT18      <---------ARR14(2)        <---------ANAC46   <---------RAP2.6(2) --------At4g35610       <---------ZAT14      --------->ARR14(3)   <<<<<<<<<TBF1     <---------ATHB51 ----->DOF2              --------->ZAT14      <---------GLK1(2) <<<<<<<<<TBF1--------->ZAT14 <-------   aagctcactgaactctgaaggcatcagtgtagtagcaaattagctcaagatccttttcacttcttcttcttcttccttgtgcgctcgataatggctgctt  5238100        ------>ZmHOX2a(1)  --------->HSFB2a(1)  --------->HSFC1(2) <---------ATHB12                                                                                 <-- <---------YAB1                                                                                  ---- --------At4g35610          <-----------GT1         <----------DOF2                            ------ ->At4g35610        <---------At5g28300<---------TOE1(3)  <---------ATHB12               <----------DOF2 --At4g35610       <-----------GT1     <---------TOE2(3)  <---------YAB1           <-------TEIL<-----   ccgatgattcctctcactatttcaccgagtttaccttgtctgaggttatctatgctttctatcattcgttttcttagattagagattcatgctttgtgat  5238200                                                             ------>MYB83                                                 <---------ZAT2                                                 --------->At4g35610                                                 --------->ZAT2                                                 <---------GLK1(1)          <---------YAB1            --------->ARR14(2)       ------>MYB46(1)--------->GLK1(1) -------YAB1                        <---------ARR14(2) --------->WRKY38(1)  <---------GLK1(1)       < -->ZmHOX2a(2)                      --------->GLK1(2)  ----------->HVH21   --------->ARR11(3)       < --->ARR11(3)                      <---------GLK1(2)<---------DEAR3(1)     <---------ARR11(3)<------- ----ARR11(3)            --------->ETT(2)      <------ZmHOX2a(1)       ---------->DOF2  <-----------RAV1(1)   cttattgctcttcttattcgaagattgtagacatggagaatctgtataaggagctcggtgaccaatctctccacaaagatttctgtcaaactgttgcctc  5238300          <----------DOF2        <-------TEIL    <---------------AtSPL8    <---------TOE2(3)    --------->MYB59    --------------->AtSPL3    --------------->AtSPL8 ----------DOF2                                                         --------->ANAC58 ---------DAG2                 --------->GLK1(2)    <---------MYB46(3)  --------->ANAC58    <------ZmHOX2a(1) --ANAC46 <---------DAG2<-----------GT1 <---------ANAC55(2)  --------->GLK1(2) <---------ANAC46    <-   tacttttaggtactttattctgaattttacgagaatttgatcatgtgaatgtgtttgttagagaatcgagacacaagcattttgtggatttataggaata  5238400                                    <----------DOF2                                 --------->GLK1(2)                                 <---------ARR11(3)                                      <---------ARR14(2)                                 --------->ARR11(3)                                      --------->ARR14(2)    --------->ATHB12            --------->RVE1(1)                                       <---------GLK1(1)   <---------YAB1       <---------ARR11(3)                                          ----------->GT1 - <------ZmHOX2a(1)      --------->GLK1(2)                              <---------ANAC46 --------->GLK1(1) --------TOE1(2)--------->AtLEC2--------->CCA1(1)             <---------YAB1  --------->YAB1 ------>ZmHOX2a(1)   gtaggattattgattttcatgcacagtatctaaaaaatctttatgtcttcttccattttctcttatagttgttctgtgaatcggaatggcaaatcctcta  5238500                        <-----------GT1              <---------ANAC58            ----------->GT1              <---------ANAC58        --------->MYB52(1)             <-------TEIL  --------------->AGL15                        <----------DOF2            --------->ALFIN1        <---------MYB59                     <---------DAG2        <-----------RAV1(2)<---------------AGL15                     <-----------GT1 <---------LBD16<---------CCA1(2)  --------->At4g35610         ----------->GT1                    <-- ---------->RAV1(2) <----------DOF2<---------At4g35610      ----------->GT1           --------->YAB1   taacctggaaacaggtgcgtctcttttttcttcatagagctaactggtaaaaaatgcaaatagagtagaaataacttttttttttgaatcaaaatgtttt  5238600  Previous    Next  AGI:  At1g15215.1    Description:  similar to sequence-specific DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G18380.2); similar to sequence-specific DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G18380.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77675.1); contains domain PROKAR_LIPOPROTEIN (PS51257) Range:  from: 5238097    to: 5240028    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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