Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <-----------HVH21                                              <-------MYC3                                              ------->MYC3                                             --------->O2                      <---------ICU4         <---------O2                    ------>ZmHOX2a(1)        <---------ALFIN1                --------->ARR14(2)    ------>ZmHOX2a(1)                <---------ARR14(2)    =================bZIP_DOF         <---------ANAC58         --------->ARR14(2)         <---------ANAC46         <---------ARR14(2)                                              ---   <---------ALFIN1--------->TOE2(3)  <----------DOF2                                             <-- ------->GAMYB  ------->TEIL      --------->ARR11(3)                             ----------->GT1----- --->ANAC55(2) <---------CCA1(2)  <---------ARR11(3)     --------->YAB1<-----------HVH21        ----- -DOF2   <---------ANAC58<---------ICU4      --------->TGA1a          --------->DEAR3(1)   <---------   taaccccacttccgtctgtatccttcattactacaatatcctttgccacatgtcataactcataagtaaacaccgtctcagagttgaaaaaatttaccaa  5182800     <---------TOE2(3)   ---------->DOF2  <---------AHL20(2)                                         --------->At5g28300  --------->AHL20(2)                 <---------GLK1(2)     <---------ZAT6 ------>AHL20(2)                 ---------->DOF2        --------->ATHB12 -------ARR11(3)             --------->ANAC58        --------->At4g35610 ---->ANAC58                 --------->ANAC58        <---------At4g35610 ---->ANAC58         --------->MYB52(1)            <-----------RAV1(2) --GT1   --------->MYB52(1)--------->MYB52(1)<----------DOF2----------->GT1                     <----   gaaattaaaggtaatggaaatactaatggaaacggcaaagaaactcactttggccagatgagtggtaaatctcatgttgtatggttctcaggctgagacc  5182900                      --------->LBD16                     <---------ANAC46                ------>MYB46(1)                ------>MYB83              <---------MYB55(2)              --------->MYB46(3)              <---------MYB111(2)              <---------MYB46(2)              --------->AtMYB61              <---------MYB111(1)             --------->ANAC58             --------->ANAC58            ------>NtERF2        --------->ANAC46        <---------bZIP60(1)                                                                         -        --------->ANAC58                                                             >>>>>>>>>>>>>>>>        --------->ANAC58                                                      <---------PCF2        <        <---------ANAC55(2)                              --------->ARR14(2)  <------MYB46(1)  <------MYB83        --------->ANAC55(2)                              --------->GLK1(2)   <------MYB83 <----------        --------->bZIP60(1)<---------DEAR3(1)            <---------ARR14(2) <---------MYB46(3)<------ -----MYB59--------->DEAR3(1)                 <---------YAB1               --------->ALFIN1   <------MYB46(1)   taaatcgattacgccaccaaactccgtggtctgcgagtaatatggatgatacttgggagaatttgggaaaacaccgagtgggtctgagtccattgttggt  5183000                                                                           <---------TOE1(3)                                                                           <---------TOE2(3)                                                                        <---------MYB52(2)                                                                       <---------At4g35610                                         ----------->GT1               --------->At4g35610    <------           <---------ANAC55(2)  <-------TEIL                           --------->ZAT2         -------   --------->YAB1              --------->CCA1(2)                   --------->ANAC46        <------ZmHOX2a(1) -------->HSFB2a(2)           <---------ARR14(2)                   --------->ANAC58       <---------At4g35610 >LFY      --------->ANAC55(2)--------->ARR14(2)                   --------->ANAC58       --------->At4g35610 ---------HSFB2a(2)<---------At4g35610  --------->DAG2      --------->AHL20(2)           >>>>>>>GRF7 -RAV1(1) <-------TEIL   --------->MYB52(1)       --------->YAB1  --------->WOX13(1)    <-----------RAV1(2) ---MYB46(3)       --------->At4g35610---------->DOF2     <---------WOX13(1)          <-----------HVH21   ttctataacaaatacatattcagcacataacagatacatagaaaggtgagaatgatgttgatttatatcaagcagctaaggctaagagtgtcaggagagt  5183100                                                        ---------->DOF2                                                       ==============HOX2a_HOX2a                                                       <------ZmHOX2a(1)                  --------->ANAC58                   --------->LBD16                         <-------       --------->ATHB12                             --------->HSFB2a(2)                      --------       <---------ICU4               --------->ANAC58<---------LBD16                        --------->At4g35610      --------->ICU4   --------->MYB46(3)         ------>MYB46(1)                   <---------ANAC58      <---------YAB1   <---------MYB52(2)         ------>MYB83<------ZmHOX2a(2)     <---------ANAC58 ---ZAT6          --------->ANAC58  --------->ANAC58<---------HSFB2a(2)    <----------DOF2 <---------At4g35610 ---->GT1  --------->ZAT14   ---------->DOF2 <-----------GT1<------ZmHOX2a(1)  <-----------RAV1(1)   taagagacatcattgcagacagggaacaaacaaaagacaagaacacattaccttccaggaaaggatcagtttgtggtctttttgttgtttgtctgatgcc  5183200                                                                                        --------->YAB1                                                                                      <---------ZAT14                                                                                      --------->ZAT14                                                                               <---------------AtSPL8                       --------->At4g35610              --------->TOE1(3)      --------------->AtSPL8                      ------>ZmHOX2a(2)      ----------->RAV1(1)       --------->bZIP60(1)                    --------->ARR14(2)     --------->MYB46(3)          <---------bZIP60(1)                    <---------ARR14(2)    <---------At4g35610     <---------ANAC46<-----------GT1 --bZIP60(1)       <------ZmHOX2a(1)      --------->At4g35610 --------->ICU4  <------------CBF------- ->bZIP60(1)--------->ALFIN1          <-----------HVH21 --------->TOE2(3)   --------->ICU4 <---------ICU4   actaagtgcaagggatggggaggatcgctgcaatacatctggtcagccaacacaaaaacctgaaattatcgtgaagtcagaattgtactatactaatcac  5183300                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                         --------->TOE2(3)                           ------------>CBF                                        --------->ANAC46                     <---------bZIP60(2)                                           --------->ANAC58 --------->ANAC58    <---------ANAC46                            --------->ANAC58  --------->ANAC58 --------->ANAC58  --------->ZAT14          --------->ALFIN1     --------->ANAC58 --------->WOX13(1) -->YAB1           <---------ZAT14  <---------YAB1      <------------CBF        <---------ATHB12 ----   agcaagcacatctctatctagtgaagtgtctcaatgttatcagagagtgttgacaactcattgtctcaagtcaaaacctgtaatcactcaacatcaaaca  5183400                                                               <---------AHL20(2)                                                            --------->AHL20(2)    ---------->DOF2                                         <---------AHL20(2) ----->ANAC55(1)                                           --------->AHL20(2) ------ANAC55(2)               <---------GLK1(1)    --------->MYB52(1) ----->ANAC55(2)    <---------ANAC58            <---------ARR14(2) ----->ANAC58       <---------ANAC58            --------->ARR14(2) ------->GT1--------->MYB59    --------->GLK1(1)--------->GLK1(2)          ---------->DOF2 ----->ANAC46  <--------P      <---------ARR14(2)  --------->TOE1(2)   ---------->DOF2       <------- ----->ANAC58<---------ANAC55(2)  --------------->AtSPL8   <---------AHL20(2)       --------->ARR11(3)   cgttacaaaagaaataggtaagtcgtgctagagaattctgtaccatagagaatccaacgaattaatttatggacaaagaaagagaagaactaggtatggt  5183500                                                                         <---------ICU4                                                                         --------->YAB1                                                                         <--------HAHB4                                                                        <---------ATHB12                                                                        <---------YAB1                                                                      --------->WOX13(1)                                      --------->ZAT18                ------>ZmHOX2a(2)                               ---------->DOF2                      <------ZmHOX2a(2)                     <---------AHL20(1)                            --------->ARR11(3)                     <---------ARR11(3)                            <---------ARR11(3)       <--------         <---------ANAC46    <---------YAB1         --------->ZAT6 --------->ARR14(2)     -----------       <---------MYB46(3)  --------->YAB1   <---------MYB52(1)     <---------ARR14(2) ------->TEIL      <---------AtMYB61 <----------DOF2    <-------GAMYB           --------->AGP1    <---------CCA1(2) --------->ANAC55(2) --------->ARR11(3)   <-----------RAV1(1)      <---------AGP1  --------->ANAC55(2) --AtMYB61      ------------>CBF      <---------ZAT14             <---------CCA1(2)<---------ANAC55(2)   cttacatgatggtggagagacaatatctttcatgaaagagagctctgttgtttaatactagacaattcagatctatcattacatcatgtatcccacacat  5183600                              ------>ZmHOX2a(2)                            <---------AGP1                     <---------YAB1                     --------->ICU4              --------->ANAC46                                  -- -ALFIN1--------->ALFIN1    ------->TEIL  <---------------AtSPL8                                 ---- >RAV1(1)    <---------DEAR3(1)           --------------->AtSPL8                               ------   tatctgagaagtagggctgtgtcattaatggatctaagacagaaaatgtacacataaatccatgtctatacaattgctctcatggataactcaagtcctc  5183700  Previous    Next  AGI:  At1g15050.1    Description:  IAA34 (indoleacetic acid-induced protein 34); transcription factor. Identical to Auxin-responsive protein IAA34 (IAA34) [Arabidopsis Thaliana] (GB:Q9C5X0;GB:Q9M9Q0); similar to IAA32 (INDOLEACETIC ACID-INDUCED PROTEIN 32) [Arabidopsis thaliana] (TAIR:AT2G01200.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO42198.1); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311); contains InterPro domain Aux/IAA-ARF-dimerisation; (InterPro:IPR011525) Range:  from: 5182251    to: 5183238    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g15060.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G73750.1); similar to Os01g0692600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043943.1); similar to hypothetical protein OsI_003298 [Oryza sativa (indica cultivar-group)] (GB:EAY75451.1); contains InterPro domain Uncharacterised conserved protein UCP031088, alpha/beta hydrolase, At1g15070 (InterPro:IPR016969) Range:  from: 5183602    to: 5186969    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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