Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------------->AGL15                               ----------------->AGL3                              <---------CCA1(2)                          <------MYB83             <---------YAB1           --------->ZAT14                          <------MYB46(1)         --------->AHL20(2)        <---------ZAT18                      <---------ARR14(2)       ----------->GT1             <---------ZAT6      ------                ----------->HVH21            ------->TEIL              --------->ZAT14         ======              <---------At4g35610------>ZmHOX2a(1)<---------AHL20(2)   <---------ZAT14       --------   gatatagtttgcattcgtctgacatatttggtttcctgatttagatgaatattaaaattcagaaccattttagtatagtgttctcatttctcaactcctg  5177100                                                                           --------->MYB46(3)                                                                          -------->P                                                                         ------->GAMYB                                                                        --------->MYB46(3)                                                                  <---------RVE1(1)                                                                 <---------ARR11(3)             -----    ------>ZmHOX2a(2)                                            --------->ARR11(3)           ------- >ZmHOX2a(1)              <----------DOF2                      ----------->ARR10--------->TOE2(3) ==========HOX2a_HOX2a------->TEIL          <-----------GT1<------ZmHOX2a(1)    --------->YAB1------- --->RAV1(2)    <-------TEIL           <---------ANAC46---------->DOF2<-----------GT1         -------   cctcgatctctatagacgttcatgtatgcttttttttgttttcgtttatcaactctcaaaaggatgagatattaacaaccattcttaatttttggcaagt  5177200                                                                                     <---------MYB52(1)                                                                                    <-------GAMYB                                                                               --------->MYB46(3)                                                ----------->GT1     <---------At4g35610--------->MYB52(2)   --------->MYB52(1)               <---------TOE1(3)           --------->ANAC58 --------->LBD16 ---->YAB1                          <---------TOE2(3)  <---------AHL20(2)    --------->ARR14(2) ---->GT1             ---------->DOF2  --------->GLK1(2)        --------->ANAC46 ------>NtERF2 -->ANAC58       ----------->GT1    <---------YAB1     --------->AHL20(2)    <---------ARR14(2) -->ANAC58      ----------->GT1 --------->YAB1 <---------YAB1   --------->ANAC58--------->ANAC46   <-   ataacaaactgagagagaatgtttaaaagtccaattttaagattccaatatgcttaaaaaattcttacgcagcatctactatccgccgttagttttagac  5177300                                                                                        <---------ANAC46               <---------HSFB2a(1)                                                      <---------ANAC58               --------->HSFB2a(1)                                                      <---------ANAC58              ---------->TaMYB80                                                  --------->ATHB12          --------->LBD16                                                         --------->ATHB51         <---------LBD16      <----------DOF2                                     --------->AHL20(2)        <---------LBD16      <---------DAG2                                       <---------ICU4    <---------YAB1         ------->TEIL                    ----------->GT1        <---------AHL20(2) --------->AHL20(2)       <-----------GT1              --------->DAG2            --------->ICU4------ ---------DOF2<---------KAN4(2)                      <---------ATHB12         --------->AHL20(2)   ccttttattatgcgggaatttcccaattgtaccttttttgtttttaaaatcaccaataagggggtgatttcaattttcaactaattatttgggtgtaatg  5177400           --------->DAG2     <---------AHL20(2)    --------->ANAC58    --------->ANAC55(2)                                                         -    ----------->GT1     ----------->GT1                                                        ------    --------->ANAC46    <---------ANAC55(2)                                           ------------>CBF    <----------ID1    --------->ICU4                         ---------->DOF2       <-------TEIL<-----    --------->ANAC58  <---------ATHB12         ----------->GT1                    --------->ALFIN1<-- --->ICU4 ---------->DOF2     --------->AHL20(2)      <---------ATHB51   --------->YAB1        <-----   ttgaatacgaaaaaaagttgagcaataagtaataaaacatgaaatacaagggtcaaattatgcaaaagaaaacaaaaataagaggtgcttcaatcttttt  5177500           <----------DOF2       <---------ZAT18                                                                       <-------       --------->ZAT18                                                                       <------- --------->DOF2                                                                             <-------- --->AHL20(2)             ------>ZmHOX2a(1)                                               --------->WRKY12 ----YAB1 <---------DAG2*TSS                                                      <---------At4g35610 -------YAB1      <-----------GT1                <----------DOF2                XXXXXXXXXXXXXXXXXXXX>MIR776 ----AHL20(2)  <------------CBF            <----------DOF2 ------->TEIL  <-----------GT1  -----------   attaaagagtccccttttattgactgtcctctctctctctctcttctttctctttgtcatgaaccagtaatcttgtttctcttcatcttccattgacgtt  5177600                                        <---------ICU4                                      <-----------ARR10                                 --------->ANAC58                                 --------->ANAC58            <-----------GT1 --ANAC58                    --------->ANAC58             <---------ARR11(3) --ANAC58     <---------ANAC58   --------->ANAC46         --------->ARR11(3)               <---------GLK1(1) -TOE2(3)     <---------ANAC58 <---------ALFIN1           <---------GLK1(2)         <---------AtMYB61 >HVH21 ------>ZmHOX2a(1)    --------->ANAC58     <----------DOF2                <----------DOF2-----   tccttctatcctcgttgccttcatttttcactcgcacgctaatcttcgcctactttgttagattttcggttttgggtttttgtcttttggtcgatttccc  5177700         <---------HSFB2a(1)                                    ----------->GT1         <---------GLK1(1)                                    <---------ANAC46        --------->GLK1(2)                                     <---------ANAC58        --------->ARR14(2)                                    <---------ANAC58        <---------ARR14(2)                                  --------->LBD16                <---------YAB1       <---------GLK1(2)     ------>ZmHOX2a(1)              ------>NtERF2            <---------YAB1       --------->ARR14(2)   --------->TOE1(3)              <---------LBD16       <-------GAMYB     --------->LBD16<---------At4g35610                    <---------RAP2.6(2)  ----------->GT1    --------->HSFB2a(2)     --------->TOE2(3)             <---------LBD16       <---------MYB46(3)    <---------HSFB2a(2)--------->At4g35610           <---------DAG2          <------MYB46(1)   <---------LBD16  --------->At4g35610              <----------DOF2         <------MYB83  <---------ANAC46 ------>RAV1(2)  ---------->DOF2                  <-----------GT1           --------->MYB111(2)   <--   ctgttcccagaatctccgattaagctgcttccttaatctcttgtctgaatataaactttttccggcgtgtaatttagataggtggttaaaattacgagta  5177800                                                            <---------ANAC58          <-----------RAV1(1)                               <---------ANAC58          <---------MYB46(3)         --------->ANAC58  <------------------------ANAC81          <---------REM1(1)      ---------->DOF2 --------->ARR11(3)                            ------       --------->ALFIN1        --------->At5g28300  <----------DOF2                            <-----     <---------ANAC46         ----------->GT1    <---------ARR11(3)                            <-----    <------ZmHOX2a(1)        --------->MYB59   --------->HSFB2a(1)     <----------DOF2--------->ARR11(3) -------ZAT6      <---------MYB52(1) --------->ANAC58 <-----------RAV1(1)     ---------->DOF2  ------   gtgagaggagtgttgttgctgttttgtttattcggtaaaacgaaatcggaagttctttgttgtcgtttgattccttttgagaaagagagatgttgggagc  5177900                                                                                    --------->ARR14(2)                                    --------->TGA1a                    <---------ARR14(2)                                    <---------bZIP60(2)                --------->ARR11(3)                                    --------->bZIP60(1)             ----------------------->TaNAC69(2)                 <-----------HVH21  <---------ANAC58                <---------TOE2(3)               --------->At4g35610  --------->O2       <------ZmHOX2a(2)            <---------ARR14(2)        --------->ZAT14  --------->At4g35610      --------->At4g35610  --------->ARR14(2)    <-----------GT1      <---------At4g35610      <---------At4g35610 <------ZmHOX2a(1) <---------ZAT14 --->At4g35610 --------->ZAT2       <---------O2  <------NtERF2--------->ZAT6   --------->RAP2.6(3) ----ZAT2      <---------At4g35610  <---------TGA1a    ======================HOX2a_HOX2a--------->ZAT14 ----At4g35610 <---------ZAT2       <---------ANAC58  <---------ARR14(2)  --------->TOE1(2) --->ZAT2  --------->ANAC46        ----------->STF1   --------->ARR14(2) ------>ZmHOX2a(2)   tggatttaacttcactcagcttcagagagctcaaattgacgtctcttatggctgcagatcgagtcacactaaggatcgtgagaacggctctgcattgttg  5178000  Previous    Next  AGI:  At1g15030.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G01260.1); similar to unknown [Populus trichocarpa] (GB:ABK93171.1); contains InterPro domain Protein of unknown function DUF789 (InterPro:IPR008507) Range:  from: 5177524    to: 5180044    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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