Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <---------TOE2(3)                                                           --------------->AGL15                                                           <---------YAB1                       <------ZmHOX2a(1)                   <---------------AGL15         <---------ARR14(2)                               <-----------------AGL2         --------->ARR14(2)                               <-----------------AGL3        <---------CCA1(2)                            --------->ARR11(3)          --------->ZAT14 --------MYB46(3)   --------->At4g35610              <---------ARR11(3)   <---------DAG2           <- -----MYB46(1)      <---------At4g35610            ----------->ARR10--------->ARR14(2)             <- -----MYB83   <----------DOF2                  --------->YAB1 <---------YAB1     <---------ZAT14<---- ------RAV1(1)<---------DAG2      ----------->RAV1(1)<---------GLK1(2)    <----------DOF2     <------   ttggtttgtcatatcccttttcagaggaaacaacaacaacaaaaaccattgatgagattttctgattatggattcacttttactaaactgtctctactgt  5106500                                    --------->MYB46(3)      <---------YAB1     ------>MYB83  <---------GLK1(1)      ------>MYB46(1)                                --------->ZAT14 --------TOE2(3)       --------->TOE2(3)                                <---------ZAT14 --------TOE1(3)       <---------MYB59    ----------->TGA1              --------->REM1(2) -----MYB52(1)<---------ATERF1(1) --------->ANAC58                     --------->ALFIN1 ---ZAT6     <---------DEAR3(1)   --------->ANAC58                <-----------GT1           ---------   tagggtttctgatgggaggctcaaacctaatcagacaaaccactatgacgagaatggagacagagttttaacagtgtagcccatataaaacccatcaaaa  5106600         <---------CCA1(1)                                           --------->ANAC58         <---------RVE1(1)                                           --------->ANAC58        <---------ARR11(3)                                        <-------TEIL  ----------->HVH21                                         ---------->DOF2  <---------ZAT14 -------- >YAB1  --------->ARR11(3)         <-----------HVH21--------->MYB52(1)  <----------DOF2  ------->TEIL   tcaaatgacagatatttctcattttctaacgagacattgtcagtgaaactcatgaaacggccaaaagatgcaagctttgtaaactgtaatgaaactaaag  5106700                                                                                         <----------DOF2                                                                                        ------>ZmHOX2a(2)                                                                                        =============                                                                                       <---------YAB1                                                            --------->ANAC58    =====================                                                          <---------WRKY38(1)   ===============HOX2a_HOX2a                                                          <---------WRKY12 <----------DOF2                                                   ----------->RAV1(2)     <---------GLK1(1)                                                   --------->ZAT2  <---------ARR11(3) --------->ARR11(3)                                                   <---------ZAT2  --------->ARR11(3) <---------ARR11(3)                                          <---------GLK1(2) --------->ANAC58    ------>ZmHOX2a(1)                                    --------->ETT(2)     --------->WRKY18(1)    =====================                                   <---------HSFB2a(2)  <-----------HVH21 <---------ANAC58 -->DOF2     --------->TOE2(3)     --------->HSFB2a(2)  <--------ZAP1     <---------ANAC58   --------   cgtcgaattagattacctcagtagaagaagagagtttctcgaccgattttctcaactgggtcaaggcaagttcttggctttcctccatgatctttggctc  5106800              --------->ARR11(3)              <---------ARR11(3)             --------->CCA1(1)             --------->RVE1(1)           --------->AHL20(2)                              --------->ANAC58      --------->TOE2(3)                                --------->DEAR3(2)     ------>ZmHOX2a(2)                                --------->ZAT14    <------ZmHOX2a(2)                                <---------SPL1(1)   <---------GLK1(2)                                 --------->SPL1(1)   --------->ARR14(2)                               <---------SPL1(2)   <---------ARR14(2)                               <---------SPL7   --------->AGP1                                  <---------ANAC46   <---------ARR11(3)                              <---------ANAC58                         <--------   --------->ARR11(3)                              <---------ANAC58---------->DOF2       <---------ARR11(3)  <---------At4g35610                           ------------------>SPL14                 --------->ARR11(3) =============HOX2a_HOX2a                <----------DOF2   --------->ANAC58          ---------->DOF2 ==========HOX2a_HOX2a                  <---------DAG2--------->SPL7--------->DAG2----------->GT1 ===========HOX2a_HOX2a                ----------------->AGL1  --------->ANAC58  --------->DAG2 -->ID1------>ZmHOX2a(1)     ---------->DOF2<-----------RAV1(1)--------->ANAC58 ---------->DOF2 <----   tctcagatcctaaaaaaatctcacagagaaataaagagagagccttttgtggtccgtacagacgcacgataaagtaagttgaaaaagtaaagagctttga  5106900                           >>>>>>>>>TBF1                       <------ZmHOX2a(1)                  ----------->RAV1(1)               --------->ANAC58               --------->ANAC46               --------->ANAC58           <-----------RAV1(2)                     <---------ANAC58                                 -           <---------HSFB2a(2)                 <---------ANAC58 <--------P                          <           ===================RAV              <---------ANAC58--------->At5g28300                 <-    ---------->DOF2 <-----------RAV1(2)       <---------------AtSPL8                             ---- --DOF2    --------->HSFB2a(2)              *TSS   <---------ANAC58               ------------>CBF<-- -----TOE2(3)---------->DOF2          ---------->DOF2  ---------->ID1    ----------->GT1        -----   tgttgacaaagacccagaagccacaggaagaagaaacagacaaagtattgggtacttgtctctacggtaagtggatagaaataactcaataagcctttcc  5107000                     --------->ZAT2                     <---------At4g35610                                                --------->ATHB12           <---------ATHB12                                                             <---------ICU4           --------->ICU4                                                              <---------YAB1       ------------>CBF                                                                --------->ICU4 -------->ZAT2       --------->At4g35610                                           ------------------ ---------ZAT2       <------NtERF2 --------->ARR11(3)                           <---------At4g35610 --------ALFIN1      <---------ZAT2<---------ARR11(3)                           <---------ZAT2    <-- ----->LBD16<---------AHL20(2)    <---------At4g35610              <---------TOE2(3) --------->YAB1<- -------ALFIN1     <-----------RAV1(2)    <----------DOF2<-----------GT1        --------->At4g35610<- ---->ANAC46--------->AHL20(2)<---------REM1(1) <----------DOF2<----------DOF2  --------->ZAT2    <--   ccaactcgctgcaattaatgggcagctggaagttgaagctctctctttgacttttgtttctactactttgacgatttaaaacagctgtgatgattacatt  5107100                             <---------ANAC58                          <---------TOE1(3)                          <---------TOE2(3)                      --------->YAB1                    --------->ARR14(2)                    <---------ARR14(2)                    ------->TEIL                  <--------HAHB4                    <-----------ARR10             <---------ICU4    <-----------GT1 <---------ARR11(1)            --------->YAB1   <-----------GT1  --------->GLK1(2)            <---------ATHB12 >ATHB9   ------>ZmHOX2a(1)  <---------ANAC58  <-----------GT1                            --------->At5g28300 -------ANAC58     <---------ARR14(1)      <----------DOF2                            <---------DOF5.7(2) ---------DOF2     <---------GLK1(2)    <---------ARR11(3)                            --------->MYB52(1) --------DAG2      <---------CCA1(2)    --------->ARR11(3)      -------->P      <----------DOF2 -------ANAC58   --------->LBD16    ---------->DOF2    <-----------GT1----------->HVH21  ----------->GT1   gctttttaactcctaaatcccgaatcttaaggcttacttaaagttcttttaatcatttttctgatcaaccatgtgaaacaggctttgttaacggttatac  5107200             <---------------AGL15                                             ----------->GT1             --------------->AGL15                    <---------ANAC58        <---------TOE1(3)      <---------ANAC46                                <---------ANAC58        <---------TOE2(3)      <---------ANAC58                          <---------YAB1              <---------MYB52(1)      <---------ANAC58                          <---------AHL20(2)         ------>ZmHOX2a(1)  --------->At4g35610                    <---------TOE2(3)          ---------->DOF2  <---------At4g35610                   <-----------GT1   ----------->HVH21<----------DOF2   atttagctgcttgttcttaattgagcattggaaattcagttctaacgatttttattgtttgtgacagaagaaaagtcctttaggttaataagttgttcta  5107300                           ---------->DOF2                <---------AHL20(1)                <---------AHL20(2)                                          <---------------AGL15                --------->AHL20(2)                                          --------------->AGL15               --------->AHL20(2)                                          ------>ZmHOX2a(2)             --------->TOE2(3)                                             ----------------->AGL2           <-------TEIL  --------->ANAC58                                  ----------------->AGL3           ------->TEIL  --------->ANAC58  <-----------HVH21              <------ZmHOX2a(2)       <---------------AtSPL8           <----------DOF2                  --------->ARR14(2)       --------------->AtSPL8  <---------GLK1(2)                         <---------ARR14(2)      ----   tctacatgagatgtacattaaattttcaagaaagattagcttctttgtcatctatttgtttttaaacttgaactggatccaaatacagtaatggcacaag  5107400  Previous    Next  AGI:  At1g14820.1    Description:  SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein. similar to SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative [Arabidopsis thaliana] (TAIR:AT1G01630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42369.1); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); contains InterPro domain Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074) Range:  from: 5105122    to: 5106944    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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