Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           ------->GAMYB                                                        <---------MYB52(2)                                                        --------->MYB46(3)                                                      ----------->RAV1(1)                           -                                                     <----------ID1                                 - ------DOF2           --------->AHL20(2)          <---------WOX13(1)    <-------TEIL              <-- --ARR11(3)           <---------AHL20(2)       <---------YAB1      --------->AHL20(2)   <-----------GT1 ->ARR11(3)   <---------TOE2(3)   <---------YAB1--------->ATHB12   <---------AHL20(2) --------->AHL20(2) -CCA1(2) <----------DOF2      --------->ICU4--------->YAB1 --------->YAB1         --------->WOX13(1)   ttttgttttctgttttatggaaatttatatgcaattcttatggccaattttgattgcaacaaacaaaatttaaatgcatcacattcaattaaaccacatc  5090600                                                                                                 <---                                                                                                 ----                                                                                             <-------                                                                                            ---------      <-----------GT1                                                                       ---------   <---------MYB46(3)                                                                       <--------   --------->MYB111(1)                                                                      <--------   --------->MYB52(2)                                                                    <---------AHL20(2)   --------->MYB46(2)                                             <----------DOF2        --------->AHL20(2) <---------MYB52(1)                              <---------ANAC58<---------ANAC58       <---------AHL20(1) -------->TOE2(3)                                <---------ANAC46<---------ANAC58       --------->AHL20(2) -------->TOE1(3)                                <---------ANAC58<---------ANAC46       <---------AHL20(2) -------TOE2(3)                           <---------WOX13(1)------>ZmHOX2a(1)       <---------YAB1 --   aacgttagttaccatacatgtatggactaaaacatctgtagttgatttatagcgtagacttcctatggcttttagtatctaaaattctaattaatttaat  5090700                                                                        ------>NtERF2                                                                       --------->DEAR3(1)                                                             --------->ANAC55(2)   --------->AtMYB61                                         <---------ANAC55(2) ------ARR14(2)                                              <---------ANAC46 ----->ARR14(2)                                              <---------ANAC55(1) --AHL20(2)               <---------DAG2                     <---------ANAC58 >AHL20(1)             <-----------GT1                       <---------ANAC58       <---------DOF5.7(2) >AHL20(2)      <---------TOE2(3)               --------->ANAC58       ----------->HVH21 -AHL20(1)     --------->YAB1   ---------->DOF2 --------->ANAC58     ------>ZmHOX2a(1)        <------ -AHL20(2) <---------YAB1 --------->TOE2(3)     --------->ANAC46    --------->TOE1(2)        <-------GAMYB ------->MYB46(3)     <-----------GT1     <-------GAMYB    <-----------GT1 ------>NtERF2    ---------   atccaccaaaatcactataatgttttaacctttttaaagcataccgttgcaagtaatctatttacgtgttcctccgacgacttcgtaaacgatgctgtta  5090800                                 --------->YAB1                                 --------->YAB1                              --------->YAB1                                   <---------AHL20(2)                              <---------ICU4                                  --------->AHL20(2)                     <---------KAN4(1)                                     --------->AHL20(2)      <-                     --------->KAN4(1)                                    <---------AHL20(2)       --                    <---------KAN4(2)                                  <---------AHL20(2)         <-- ---------->ID1 --------->HSFB2a(2)                                   <---------AHL20(2)        ----- ---MYB52(1) <----------DOF2<---------MYB52(1)            ------>ZmHOX2a(1)<---------AHL20(2) <------ -->GT1 --------->YAB1--------->KAN4(2)         <----------DOF2       --------->AHL20(2)   <---------YAB1   ttcgtcgttttcatacttttggaataatccgataatcacagcatcacgttctttctcttcctctgttcaagattaatttatataataagttttttgatta  5090900                          <---------ICU4         --------->ANAC58 --------->AHL20(2)         --------->ANAC46 <---------AHL20(2)         --------->ANAC58--------->ICU4  <--------HAHB4       --------->YAB1  <---------ICU4      --------->AHL20(2)  --------->ATHB12--------->MYB46(3)  --------->YAB1  <---------ATHB12 --------->ICU4  -------->P <---------YAB1 --------->WOX13(1)                                                                  - --------ICU4--------->ANAC58    <-----------GT1                                              <------ ------->YAB1--------->ANAC58<---------AHL20(2)                            ---------->DOF2    ------- -------ATHB12<---------ATHB12<---------AHL20(2)               <----------DOF2               <------- ---->YAB1------------>CBF--------->ATHB51                    <---------DAG2         *TSS    <------- ---WOX13(1)--------->WOX13(1)--------->AHL20(2) ----------->TBP       ------>ZmHOX2a(1)<----------DOF2   atcatcattacaagcaatcaaccattaattatttatttctatattagtagtatatatacaaatgccttttctcctacaaaagactcgctgcttttactac  5091000                                                                                           <-------GAMYB                                                                                          --------->LBD16                                                                                        <---------LBD16                                                                                      <---------ARR14(2)                                                                                     <---------GLK1(1)                                                                                     --------->GLK1(1)                                                                                    <---------ARR14(2)                                                                                    --------->ARR14(2)                                                                                   <------NtERF2                          --------->LBD16                                       <------NtERF2                         <---------DEAR3(1)                                     <---------LBD16                         <---------ANAC46                                      <---------RAP2.3(1)                        <------NtERF2                                          <---------RRTF1(1)                        <---------LBD16        <-------GAMYB                   <---------ERF1                        --------->ATERF1(1)    --------->At5g28300             ------>NtERF2                       <---------ORA47(2)     <---------DEAR3(2)              <---------RRTF1(3)                       <---------RAP2.3(1)    <---------MYB46(3)              <---------RRTF1(2)                      <---------RAP2.3(2)    <---------DEAR3(1)               --------->ATERF1(2)          --------->CCA1(2)<------NtERF2     <---------ANAC46                 <---------RAP2.6(2)  <------ZmHOX2a(1)   <---------DEAR3(1)    <------NtERF2                     <---------RAP2.3(2) ----------------------->ANAC81            <---------RAP2.3(1)                <---------RAP2.3(3) ---------AGL15       <---------RAP2.3(3)  <---------DEAR4(2)                 <---------ATERF1(2) -------->AGL15    <---------ARR14(2)     <---------RAP2.3(3)                 <---------DEAR3(1) ----------AGL1<---------At4g35610        <---------RAP2.3(2)              ----------->HVH21 ----------AGL3--------->At4g35610        <---------DEAR3(1)    <---------TOE2(3)<---------ANAC46   aagaggaaacagagatgagcagagacggcggagatgtaattgagacggcggttaagagtcttggcaaaggtttcgatttgacggcggatttccggttgaa  5091100                         --------->LBD16                       <---------LBD16                      ------>NtERF2                      --------->LBD16                     --------->DEAR3(1)                    --------->RAP2.3(1)                    <------NtERF2                    --------->ATERF1(1)                   <---------ATERF1(1)                   ------>NtERF2                  --------->ARR14(2)                  <---------ARR14(2)                 --------->ATERF1(1)                <---------DEAR3(2)                <---------RAP2.3(1)                ------>NtERF2               <---------RAP2.3(2)              --------->ATERF1(1)              <------NtERF2             <---------ATERF1(1)             ------>NtERF2<------NtERF2       <---------ANAC58            <---------DEAR3(1)                <---------AtLEC2            ----------->HVH21                 <---------ANAC58            --------->DEAR3(1)          <---------ANAC58           --------->ATERF1(1)          <---------ANAC58           <------NtERF2--------->DEAR3(1)  <---------YAB1           --------->RAP2.3(1)         <------MYB46(1)          <---------DEAR4(2)<---------At4g35610          <---------ATERF1(1)          <---------MYB46(3)          <---------RAP2.3(1) ----------->HVH21       ------>MYB83         <---------DEAR3(1) --------->At4g35610  <---------WRKY18(1)             --------->LBD16    ---------->DOF2<---------RAP2.3(1) <------MYB83 <---------MYB59              ------>ZmHOX2a(1) ----------->GT1<---------ATERF1(1)  <---------WOX13(1)                     --------->KAN4(2) <---------ZAT6<---------DEAR3(1)   <---------GLK1(2) ------>MYB46(1)      <----------TaMYB80   atactgtaaagacggcgacggctccgccggagatgacagattggttgtgcttgaccaaactcaaaacagagaattgcatattcctggtttcggtgttttt  5091200                                                                                        <---------At5g28300                                                                                       <-----------GT1                    --------->TOE1(2)                                           ------>ZmHOX2a(1)         ------>NtERF2                                                         --------->TOE2(3)         <---------At4g35610                                                --------->ARR14(2)         --------->LBD16                                  --------->GLK1(2) <---------ARR14(2)      -        --------->DEAR3(1)                           <---------ETT(1)     <---------HSFC1(2)        <        --------->ANAC46----------->RAV1(1)       <---------MYB52(1)      --------->HSFC1(2)<--------       <---------LBD16 <----------ID1           <---------ANAC58          --------->HSFB2a(1)  <-----       --------->ATERF1(1) ---------->DOF2      <---------ANAC58          <---------HSFB2a(1)  <-----   caaaatgtctccgccgatataaactgcgacaaaggagaacgaactcgattccgttccgacattcttgacttcaacaaggttcctcagttttacagtttct  5091300     ------>ZmHOX2a(1)    --------->TOE1(3)    --------->TOE2(3)                      ------->MYC3                             <------NtERF2 --------->ARR11(3)                        <-------MYC3                           <---------ANAC46 <---------ARR11(3)              <---------AHL20(2)                               --------->ETT(1) -------->GLK1(1)                <-----------GT1                               <-----------RAV1(1) ---------GLK1(1)            <---------RVE1(1)                               --------->At4g35610 -GLK1(2)                    <---------CCA1(1)                               <---------At4g35610 ----ANAC58                 --------->ARR11(3)                        <------ZmHOX2a(2)      <------- ----ANAC58                 <---------ARR11(3)      <-----------RAV1(1) --------->WOX13(1) <---------AHL20(2)   tgatatccttaaacttctaaatcacatatagatatttacattacatgtgtgtttttgttgttgttgttttggatcattcagatgtcggagtattttaacc  5091400                                                                                   --------->LBD16                                                                                   <------NtERF2                                                                                   ------>NtERF2                                                                                  --------->RRTF1(2)                                                                                  --------->RAP2.3(3)                                                                                  --------->RAP2.3(2)                                                                                  --------->DEAR3(1)                                                                                  --------->RAP2.6(2)                                                                                 <------NtERF2                                                                                 --------->RRTF1(1)                                                                                ------>NtERF2                                                                                <---------ATERF1(1)              ----------->GT1                                                   <---------RAP2.3(1)              --------->LBD16                                                  --------->DEAR3(1)            <---------LBD16                                                    --------->ANAC58         --------->WRKY12                                                      --------->ANAC58         --------->WRKY38(1)                                                   --------->ANAC46         ----------->HVH21                                                <------NtERF2          <---       <---------DEAR3(2)                                                ----------->RAV1(1)  -------       <---------MYB46(3)               --------->ANAC46                 ------>NtERF2        <------      <---------DEAR3(1)     ----------->GT1                            <---------ETT(2)  --------->DOF5.7(2)      <---------At1g77200    <------NtERF2                              ----------->HVH21--------->TOE2(3)     <------NtERF2          <---------HSFB2a(2)          ---------->DOF2--------->ETT(2) --------->TOE1(3)   <---------DEAR3(1)       --------->HSFB2a(2) <-------TEIL     --------->WRKY18(1)    ----------->GT1 ----GT1<-----------HVH21<-----------HVH21    <---------SPL7    <-----------HVH21--------->RAP2.3(1)-   agaggtcgtcggtgaccggaaaaataccgtcgggaaatttcaacgcgacgttcgggtttcaaagcgggtcatgggcgacagacgccgcaaacgttaaatc  5091500  Previous    Next  AGI:  At1g14780.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G24290.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO42380.1); contains InterPro domain Membrane attack complex component/perforin/complement C9 (InterPro:IPR001862) Range:  from: 5090985    to: 5094147    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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