Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                                                                                                -----                                                                                  --------->TOE1(1)                                                     ------>ZmHOX2a(1)            --------->TOE2(1)                                        ====================HOX2a_HOX2a       <---------ARR11(3)<----                                        ------>ZmHOX2a(2)                     --------->ARR11(3)-----                                  --------------------->WRI1            <---------ZAT6    ------>ZmHOX2a(1)    --------->ARR14(2)  <---------ARR14(2)  --------->At4g35610    <---------ANAC46      --------->TOE2(2) -------->RAV1(1)       --------->ARR14(2)  <---------At4g35610   <---------At4g35610    --------->TOE1(2)   caccagaattcgaatcaacacaagacgattcgcttacttcgatctcatctccctccttctccttgtgtagcttagagtaagacctcgtaatccttcgaaa  5082100           <---------ATHB12          ------>MYB46(1)          ------>MYB83                                                                            <--        --------->MYB46(3)                                                                        ---     <-----------GT1                       --------->HSFC1(2)                           --------->HSFB2a(2)    --------->MYB46(3)                     <---------HSFC1(2)                     <---------ARR11(3) -----HSFB2a(1)                            <---------HSFB2a(1)             <---------GLK1(2)    ----- ---->HSFC1(2)                  --------------->AGL15                      --------->ARR14(2)   ----- -----HSFC1(2)               <-----------GT1                --------->YAB1 <---------ARR14(2)   <---- ---->HSFB2a(1)    ------>ZmHOX2a(1)       --------->HSFB2a(1)         <---------LBD16  <---------HSFB2a(2)   tttcgaatcaccaatcgtctccttcacattataaccaggtttagaaacttctacctcttcaattagagtcttcttcggattcgagctcttctcgactctg  5082200         <------ZmHOX2a(1)        --------->ANAC58        --------->ANAC46              --------->ZAT2        --------->ANAC58        --------->ARR14(2)    ----------->RAV1(1)    --------->ANAC58              --------->ZAT2   --------->MYB46(3)      --------->ANAC58              <---------ZAT2 -------HSFB2a(2)       --------->At4g35610              <---------At4g35610 ------>HSFB2a(2)       <---------At4g35610              --------->At4g35610                <-------- ---->ZAT2              --------->ZAT2<---------ZAT2    ----------->RAV1(1)               --------->ATHB12 ---->At4g35610      <---------At4g35610  <------ZmHOX2a(1)                       --------->LBD16 -----ZAT2--------->ARR14(2)    <---------ARR14(2)    --------->At4g35610    --------->At4g35610   ctcgaaccacaggaaacgttgtcatcagctagcaaatcggagcaggaatcgacagaagcagcagagactccgatttgtttgctccagagaggtgattgaa  5082300                                                <---------HSFB2a(1)    <---------DEAR3(2)                                                <---------ZAT2        <---------DEAR3(1)                                                --------->HSFC1(2)   <------NtERF2                                                <---------HSFC1(2)   --------->ATERF1(1)                                                <---------At4g35610 <---------SPL7                                                --------->HSFB2a(1) <-----------HVH21                                               --------->ARR14(2)   ------>NtERF2                                               <---------ARR14(2)   <---------ATERF1(1)                 --------->ZAT14         <---------SPL7            --------->DEAR3(1)                 <---------ZAT14        --------->WRKY38(1)        <---------DEAR3(1)                 <---------ZAT18        <---------ETT(2)           <---------ANAC46             ------>ZmHOX2a(2)          --------->WRKY12       --------->SPL7            --------->CCA1(2)           --------->ETT(2)      --------->MYB52(1)            <------ZmHOX2a(2)          <------NtERF2       <------NtERF2--------->At4g35610           <---------ARR14(2)         <-----------HVH21  <---------LBD16<------NtERF2           --------->ARR14(2)        <---------ANAC46   <---------HSFB2a(2)           --------->ARR11(3)   <---------ARR14(2)      <---------LBD16------>NtERF2  <----------DOF2           <---------ARR11(3)   --------->ARR14(2)      --------->HSFB2a(2)    <---------ANAC58  ----           --------->AGP1<---------LBD16----------->HVH21--------->LBD16<---------At4g35610     =====          --------->GLK1(1)  <---------ANAC46--------->LBD16 <---------SPL7    <---------ANAC58 -----         ----------->ARR10 --------->LBD16 <---------LBD16------>NtERF2<---------ATERF1(1) <---------GLK1(1) -WOX13(1)<---------GLK1(1)------>NtERF2--------->DEAR3(1)--------->LBD16  <-----------RAV1(2)  =====   caagaacgggagagatctgtgctctcttccggcgtaatcgcgtcgaccggagcttcttcccggcgaacggcgtcggctcaggcttgcgctttgaattcct  5082400                    <-----------GT1          ------>ZmHOX2a(1)  ---------->DOF2      ------>ZmHOX2a(2)    --------->ANAC58     <------ZmHOX2a(2)     --------->ANAC58     <---------GLK1(1)     --------->ANAC46     --------->GLK1(1)    --------->SPL7    --------->ARR14(2)   --------->SPL1(1)                                       --------->MYB52(2)    <---------ARR11(3)   <---------SPL1(1)                                     <---------MYB52(1) ------>CDC5        ------------------>SPL14                                  <-------GAMYB ============HOX2a_HOX2a<---------SPL7                                       --------->MYB52(2)    <- ->ZmHOX2a(1)     <-----------GT1                                           <-------TEIL           -- ===========HOX2a_HOX2a <---------SPL1(2)                                 ------------>MYB.PH3(2) ---   catcgcgatctccttcattttttctccgtacgaaagcttgaaactagaaattagaaattcgaattttgaaaatggaagttcgttagtcagagactagaga  5082500                                                                                      ------->MYC4                                                                                      ------->MYC3                                                                                      <-------MYC3                                                                                      ------->MYC2                                                                                      <-------PIF4                                                                                      ------->PIF4                                                                                      <-------MYC2                                                                                      <-------PIF5                                                                                      <-------MYC4                                                                                     --------->TGA1a                                                                                     --------->ANAC58                                                                                     <---------TGA1a                                                                                     --------->ANAC46                                                                                  --------->ZAT18                                                                               <------MYB83                                                                               <------MYB46(1)                                                                               <---------ANAC58                                                                               <---------ANAC46                                                                               <---------ANAC58                                                                              <---------AtMYB61                                                                              --------->MYB46(2)                                                                            <---------MYB52(1)                                                                        --------->SPL7------->PIF5                   --------->HSFC1(2)                                  --------->STY1(1)                   --------->HSFB2a(1)                                 <---------STY1(1)                   <---------HSFC1(2)                                  --------->MYB52(1)    --------->At4g35610                                               <---------SPL7 --------->ANAC58    <---------At4g35610         --------->ALFIN1                    --------->ANAC46------->TEIL   ----------->HVH21   <---------ANAC58                           <-----------GT1 <---------ZAT18 --------->At4g35610   <---------ANAC58                        <---------YAB1 --------->MYB111(2) <---------At4g35610   <---------ANAC46                      <---------RVE1(1)--------->MYB55(2) --------ZAT14 *TSS<---------HSFB2a(1)                       <---------CCA1(1)--------->MYB52(2) ------->ZAT18<---------HSFB2a(2)       <---------MYB46(3)  <---------ARR11(3)--------->MYB111(1) ------>ALFIN1--------->HSFB2a(2) --------->ALFIN1          --------->ARR11(3)<---------MYB46(3) ----   gtgggctgatgcagttatagaagtttcttgggaagagtggggatgttggagagtgagagagagatattataccctacggtttggtgcacgtgaaaccagt  5082600                                                                               --------->YAB1                                                                      --------------->AtSPL3                                               <---------ANAC58     <-----------HVH21                                               <---------ANAC46     <-----------TGA1                                     <------ZmHOX2a(2)             --------->ANAC46         --------->ANAC46           --------->ARR11(3)         ----------->RAV1(2)         --------->ANAC58           <---------ARR11(3)         <---------At4g35610             ------         --------->ANAC58          <---------GLK1(1)          ------->TEIL--------->ZAT14--------->At4g35610 ------->GT1  <---------YAB1<---------TOE2(3)  <---------ANAC58--------->At4g35610       <---------At4g35610   cgtaaatttggacgctattcttgtttggctaatgtagagatcagcgtttgcgtttgaatttatgcatctgcgtcagtacaatcacagatttagctaaaaa  5082700                                            <---------AHL20(2)                                           <---------AHL20(2)                <---------AHL20(2)      --------->YAB1             <---------ICU4            <---------AHL20(2)                              <---------ANAC58            <---------YAB1             <---------YAB1                           --------->YAB1            --------->ICU4           --------->YAB1                             <---------ICU4         <---------YAB1<---------At4g35610 --------->AHL20(2)         <-------TEIL     <---------ANAC58      <---------ARR14(2)       <---------TOE2(3)                  >>>>>>>>>MYB98<--------HAHB4      --------->ARR14(2)    <---------WOX13(1)              <----------DOF2    <---------ATHB12 ---->DOF2--------->YAB1  --------->ATHB12 <---------AHL20(1)   <-----------GT1--------->ICU4   agcatgcggttttgataattacttcaactgattgatgttttataattaatttctctagtatgctttttaacatacagtctaatcatttttcttgcatcaa  5082800                                     ------->MYC4                                     <-------MYC4                                     <-------MYC3                                     ------->MYC2   --------->ALFIN1                  ------->MYC3  ------->MYC2                       <-------MYC2  <-------MYC2                      --------->TGA1a  <-------MYC3                      <---------TGA1a  ------->MYC3                      --------->O2  <-------PIF5                      --------->ANAC55(2)  ------->PIF5                      <---------O2 <---------O2 ---------->DOF2  --------->At4g35610 --------->O2 ================================bZIP_DOF --------->TGA1a               <---------ZAT18 <---------TGA1a               <---------At4g35610 <---------bZIP60(2)    --------->AHL20(2)                   --------->YAB1 <---------ANAC46     --------->TOE2(3)       <---------AHL20(2)                                  --- <---------ANAC55(2) --------->YAB1 <---------ANAC55(2)     <---------YAB1                      ----- ========================bZIP_DOF  ------------>OsbHLH66--------->AHL20(2)                      <----   atcacgtggaagaactaaaagaaacataaattgagcacacgtgtgaatttttttttaaaaaaatcatagataagtttgtgaatgtcatattgttggaatt  5082900                                                              --------->ZAT6                                                             --------->ZAT14                                                             <-------TEIL                                                             --------->ZAT18                                                             <---------ZAT18  --------->ZAT6                                                         --------------->AtSPL3                                                         <---------------AtSPL8                                                     <---------YAB1          --------->ZAT18                                                     <---------AHL20(2)      <---------ZAT18                                                  --------->AHL20(1)         <-------TEIL                                                  <---------ARR11(3)         --------->ZAT14                                                  <---------AHL20(2)     --------------->AtSPL8                                                  --------->ARR11(3)     --------------->AtSPL3   <---------YAB1                                 --------->AHL20(2)     <---------------AtSPL8 ------->DOF2                                     <---------AHL20(1)<---------DAG2 ---->AHL20(2)                              --------->At5g28300     <----------DOF2 -----AHL20(2)   <----------DOF2           <---------ZAT6--------------->AtSPL8   aaaagatgatttaagaagactttttttatacactgaaattgatcactgttaatatattataggtacactactttataggtacactacttgtgtaacattt  5083000  Previous    Next  AGI:  At1g14750.1    Description:  SDS (SOLO DANCERS); cyclin-dependent protein kinase. Identical to Cyclin-SDS (SDS) [Arabidopsis Thaliana] (GB:Q1PFW3;GB:Q8RYC7;GB:Q9LQV6); similar to CYCB2,2 (CYCLIN B2,2), cyclin-dependent protein kinase regulator [Arabidopsis thaliana] (TAIR:AT4G35620.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78702.1); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin-related (InterPro:IPR013763); contains InterPro domain Cyclin, N-terminal (InterPro:IPR006671); contains InterPro domain Cyclin-like (InterPro:IPR011028); contains InterPro domain Cyclin, C-terminal; (InterPro:IPR004367) Range:  from: 5079402    to: 5082515    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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