Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        <---------ATERF1(2)                        <---------YAB1                      --------->ATERF1(2)                     --------->ICU4                    <---------At4g35610                    --------->AHL20(2)        --------->GLK1(2)                    <---------ZAT2                   --------->AtLEC2               <---------ARR14(2)                    --------->At4g35610              --------->ANAC58            --------->HSFB2a(2)                 <---------At4g35610                 --------->ANAC58            <---------HSFB2a(2)        <---------ZAT14                         --------->ANAC58--------->ARR11(3)  <---------GLK1(2)        --------->ZAT14------>NtERF2   --------->ARR14(2)----------->GT1<----------ID1        -------       ------>ZmHOX2a(1)      <---------YAB1    --------->ANAC58<---------ARR11(3)  --------->ARR14(2)     ----------->RAV1(2)<------NtERF2  <---------ARR14(2)--------->ANAC58     --------->ARR14(2) -------->MYB46(3)  --------->ZAT2    <------ZmHOX2a(1)  --------->ANAC58     <---------ARR14(2)   taacaactcctgcagagtaatctgctggcaatttgatagaggaactgaagaagccatgcaagtaaatatcatttgagacaaatccagaacctgtaaacat  5068200                                          --------->ANAC46                                          --------->ANAC58                                          --------->ANAC58                                   --------                             ---------->DOF2                                                 --------                            --------->AHL20(2)                                              ---------                            <---------AHL20(2)                                     --------->YAB1                        <---------------AGL15          --------->At4g35610      <----------DOF2                      --------->YAB1    --------->MYB52(1)                   <---------ARR14(2)   ---                --------->YAB1         <---------ARR14(2)                    --------->ARR14(2)   ---                --------->TOE2(3)      --------->ARR14(2) <------ZmHOX2a(1) <---------MYB52(1)  <---- -->YAB1       ----------->GT1<---------TOE2(3) --------->KAN4(2)       --------->MYB52(1) --------->TOE2(3)   catttaagaagaatactatgttaataacaattaaagaaacagaaacggaacatactcagaggaacaagaacacaaaccggttctttcatcaagcgttaac  5068300       <-----------GT1    --------->ARR14(2)    <---------ARR11(3)    --------->ARR11(3)    <---------ARR14(2)    <---------GLK1(2)  ----------->ARR10                        ---------->DOF2 ->WRKY38(1)                       <-----------HVH21      --------->TOE2(2)                      <--- ->WRKY12                     --------->GLK1(2)           --------->TOE2(3)                      ---- >DOF5.7(2)                  <---------GLK1(2)         <-----------GT1              <----------DOF2 -------->HVH21              --------->ARR11(3)   <---------ANAC46                --------->HSFC1(2)< ------>LBD16              ----------->ARR10  --------->At4g35610                 <---------HSFC1(2)- -----LBD16               --------->YAB1 ---------->DOF2 <---------HSFB2a(1)   <------ZmHOX2a(1)-----   cggacagattttccatctctgtgaacaataagattctggtcaccaaagagctgtgtgtaaccttcgtcgaactgtataagaggaagcttttgtagagcaa  5068400         ------>MYB46(1)         ------>MYB83         --------->MYB52(1)       <---------MYB59 --------->LBD16 ------ARR14(2) ----->ARR14(2) ---------HSFB2a(2)        --------->AtLEC2                                                        -- -------->HSFB2a(2)   ----------->HVH21                                                           <-- ---->GLK1(1)       ----------->GT1        ----------->GT1         <---------YAB1   <---------ANAC46   atccagaaaccaaactggtgaagagtgacatgaaaactaaaaatcgagttataaaacccattttttgttatgaatgaaaaacgtttctgtgtataagagt  5068500          ---------->DOF2       --------->ANAC58       --------->ANAC58     <------ZmHOX2a(1)    <----------ID1                     <---------ANAC58        <----------DOF2                     <- <---------YAB1                        <---------ANAC46      --------->At4g35610               ------ ------->YAB1                          <---------ANAC58      <---------At4g35610               <----- -------YAB1                 ----------->GT1    <------ZmHOX2a(1)     ---------->DOF2         <------ZmHOX2a(1)   attatgaggacgaaaagagaagagacttaaatggataaatagcgtcttgaggacgagttttggagctgtattgaaagagagagagagagagagagaggat  5068600                                                    <---------MYB46(3)                                                    <------MYB83                                                    <------MYB46(1)                                                    ----------->GT1                                                --------->ATHB12                                   --                                                <---------MYB46(3)                                 <-                                               <---------YAB1                                      --                                               <---------AtMYB61                                   <- ---------->DOF2                        *TSS   <---------TOE2(3)                                ----- --------ZAT6         ------->TEIL--------->ZAT14  <---------AtMYB61                         <------- --->ARR14(2)      <---------YAB1 <---------ZAT14 <--------P <----------DOF2    <-----------HVH21 --- ----ARR14(2)<---------YAB1     <------NtERF2  <---------TOE1(3)    --------->YAB1   <---------MYB52(1)   agtgaaagaaatagtatgagtatgaatatgaggcagagtacttctggctatggttggtttatacttttaatcttcataaatatgtcagtttgttttttcc  5068700            <---------AHL20(2)     <----------DOF2  <-----------GT1  <---------AHL20(2)  <------------CBF ------->YAB1    <------------CBF           --------->DAG2 -------HAHB4   <---------ICU4            ---------->DOF2 ------->ATHB51 <---------AHL20(2)     <------ZmHOX2a(2) --------ICU4   --------->ATHB12      --------->ARR11(3)   <---------DAG2               --------->YAB1 ---->TOE2(3)  <---------AHL20(2)     <---------ARR11(3)   <----------DOF2   <---------YAB1 ----GT1   <---------AHL20(2)     ---------->DOF2     --------->At5g28300 --------->GLK1(2) ------>ICU4--------->AHL20(2)----------->GT1        ----------->GT1     <---------GLK1(2)         <-   ataattacttttatttatttattgcattggaccagtaaaagatcaaaaggctatgctgtaacttttttttcaagagattctaatttgcaattagactgat  5068800              <---------YAB1            <------ZmHOX2a(1)                                                             <----------DOF2        --------->TOE1(2)                 <---------ARR11(3)                          <---------GLK1(2)  --------->YAB1                          --------->ARR11(3)               --------->TOE2(3)  --------->TOE2(3)                    <---------TOE2(3)                 <---------ARR11(3)  --------->TOE1(3)         <-----------GT1--------->CCA1(2)             --------->ARR11(3) --------GLK1(2) <---------YAB1       ---------->DOF2      --------->YAB1<---------ARR14(2)   ggaatcttaaactaggattattattctattttacatgttttaaagatatactaatttgcaattagactgatggaatatcttaaacttggattctttttcc  5068900                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                   <-                                                     <---------YAB1                               ---                                                   <-----------GT1                              =====                                             ----------->GT1                                  =======                                            <---------TOE2(3)                     <---------At5g28300                                            <---------TOE1(3)                    <-----------GT1<----            ---------->DOF2  <---------ARR14(2)    --------->YAB1   <---------ARR14(2)        <------ZmHOX2a(1) <-----------GT1             --------->ARR14(2)   <---------YAB1    --------->ARR14(2)        =======   attttacatgttttaaaagaaaaccatggcatatcgactgatagctaaggttattacaattttgttagcatatactacaaaatttaccgcattgaaggat  5069000                                      <---------YAB1                                   <---------YAB1                                  <----------DOF2                                 ===============================HOX2a_HOX2a                                 ------>ZmHOX2a(2)                                <------ZmHOX2a(2)                                <---------RVE1(1)   <----------DOF2              ================================HOX2a_HOX2a  ==============================HOX2a_HOX2a                                              --------->TOE2(3)  ------>ZmHOX2a(2)            <---------ARR14(2)                               <----------DOF2 ===============================HOX2a_HOX2a                                    ------>ZmHOX2a(2) <------ZmHOX2a(2)             --------->ARR11(3)                             <---------RVE1(1) <---------RVE1(1)             --------->ARR14(2)                             <------ZmHOX2a(2) ---------ARR11(3)             <---------AGP1                                <---------ARR14(2) ---------ARR14(2)             --------->AGP1                                --------->AGP1 -------->ARR14(2)             <---------ARR11(3)                            --------->ARR11(3) ---------AGP1                <---------CCA1(2)          <----------DOF2     <---------AGP1 -------->AGP1               ----------->ARR10           =============================HOX2a_HOX2a -------->ARR11(3)         =====================================HOX2a_HOX2a  --------->ARR14(2) --------CCA1(2)           <------ZmHOX2a(2)             ------>ZmHOX2a(1)   <---------ARR11(3)  <--- -------->ARR10          ===============HOX2a_HOX2a      =======================HOX2a_HOX2a      <--- ===============================HOX2a_HOX2a      --------->DAG2            ----------->ARR10    <---- ========HOX2a_HOX2a     ==============HOX2a_HOX2a       ============================HOX2a_HOX2a----- --ZmHOX2a(2)            <------ZmHOX2a(1)      --------->DAG2           <------ZmHOX2a(2)  --------- =======HOX2a_HOX2a    <---------TOE2(3)       ---------->DOF2<---------YAB1<---------CCA1(2)   -----   cagatcttttttttttttttctactaaggatcagatctttattagtgggaaaaggggtccttttatatttggacgatcagatctttttttttcttaaaga  5069100  Previous    Next  AGI:  At1g14720.1    Description:  XTR2 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE RELATED 2); hydrolase, acting on glycosyl bonds. Identical to Probable xyloglucan endotransglucosylase/hydrolase protein 28 precursor (XTH28) [Arabidopsis Thaliana] (GB:Q38909;GB:O04750); similar to EXGT-A3 (endo-xyloglucan transferase A3), hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase [Arabidopsis thaliana] (TAIR:AT2G01850.1); similar to xyloglucan endotransglycosylase/hydrolase precursor XTH-39 [Populus tremula] (GB:ABM91072.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPro domain Xyloglucan endotransglucosyla Range:  from: 5066631    to: 5068640    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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