Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        --------->ANAC58                                       <---------AHL20(2)                            <-----------GT1                                       --------->AHL20(2)<---------ALFIN1          <---------AHL20(2)                                <---------CCA1(1)   <---------ALFIN1            <--------ATHB1                                <---------RVE1(1)  --------->ZAT14              <---------ICU4                               <---------ARR11(3)  <---------ZAT18              --------->AHL20(2)                       --------->TOE2(3)           <---------ZAT14              --------->ATHB51                       ------->GAMYB<---------AHL20(2)--------->ANAC58          <---------AHL20(2)                      --------->MYB46(3)         --------->ANAC58              <---------ATHB51                      <----------ID1--------->AHL20(2)--------->ANAC46         --------->ICU4             --------->ZAT14   --------->ARR11(3)--------->ANAC46            --------->YAB1       <-- -----TGA1   <---------ZAT14   --------->AHL20(1)--------->ANAC58         ----------->GT1   --------- ->YAB1  <-----------GT1   ---------->DOF2     <-----------GT1       ---------->DOF2--------->AHL20(2)   attcttcatattcactatactataaccacaaaagatattaaaaaaatagtcactccactccacatctaatacaaagaagtaataatttaactattcaaaa  5037200                                  ----------->GT1                                 --------->ANAC58                        <-----------GT1                     <---------ARR11(3)              <---------YAB1     --------->ANAC58                                 <---------At4g35610      ----------->GT1--------->ARR11(3)                <-------TEIL               --------->At4g35610 -------AHL20(2)   ----------->ARR10                  --------->CCA1(2)         --------->ZAT18 >YAB1<---------ZAT6 <---------GLK1(2)      --------->ZAT6 <---------TOE2(2)    <---------ZAT18  <---   tttatgaagtgttaatacgataagattttcgacccaaggaaaaaaaacactataagatacataggtttggcagaacaattagttcgctcactgcctacat  5037300            <---------AHL20(2)            --------->AHL20(2)      --------->ATHB12                         <---------ICU4 ====================================MADS_MADS                              --------->ICU4 <---------------AGL15             --------->ICU4                           <---------ATHB51 <----------DOF2     <---------------AGL15                                  <---------AHL20(2)  ----- --------------->AGL15      ----------->GT1                                 --------->AHL20(2)  ----- ------GLK1(2)       --------------->AGL15     ----------->GT1          <---------YAB1        -------   attctttttttggtttaattagcctacatatgggaaaatgatttgtattttgttaaatgccactcacatttgttataaataattagtcttggtttcaaaa  5037400                                            <------MYB46(1)                                            <------MYB83                                          <--------P                                        --------->ATHB12                                        <---------MYB46(3)                                       <---------TOE2(3)                                       <---------TOE1(3)   <---------AHL20(2)               <---------YAB1            -------->ATHB1  <---------AHL20(1)               <---------AHL20(2)         --------->ATHB51  <---------ARR11(3)           --------->AHL20(2)             --------->ATHB12 ---->ANAC58  <---------AHL20(2) <---------YAB1              <---------YAB1             <<<<<<<<<<GT-3b ---->ANAC58------->TEIL       <---------AHL20(2) ----------->GT1                 --------->ANAC55(2) --->DOF2<---------YAB1  --------->YAB1<---------YAB1  ---------->DOF2<---------ZAT14------->TEIL   gccatatatttatgaatttatagacattgatatttatttttatggttggaaatggtataaagtattattgactatagtttttttatgtatttttcttatg  5037500                          --------->AHL20(2)                          <---------AHL20(2)                     --------->AHL20(1)               <---------WOX13(1)                     <---------AHL20(1)              <------------CBF              <---------MYB52(1)                  --------->AHL20(2)               <---------YAB1               ---------->ID1              --------->YAB1            ----------->HVH21                   <------------CBF            --------->AHL20(2)        --------->At4g35610              ----------->TBP              <  --------->DAG2 --------->YAB1       <---------At4g35610              <---------AHL20(2)         <-- ---------->DOF2 --------->AHL20(2)   --------->ZAT2--------->ATHB12   --------->AHL20(2)  ------>ZmHOX2a(1)   aaataaagtgagaaaataataaaaatattaaaatttgtgtagctgactcgagtttgattgaagtctttggtatataaatattgtcgttatttcctccatt  5037600                                                                  --------->ZAT18                                    ====================================HOX2a_HOX2a                                   --------->GLK1(1)             <------ZmHOX2a(1)                                   =====================================HOX2a_HOX2a                                  --------->AGP1              --------->YAB1                                  <---------AGP1             <---------ATHB12                                  <---------ARR14(2)         --------->ICU4                                  --------->ARR11(3)    --------->ANAC55(1)                                  <-----------ARR10     --------->ANAC46             ------>ZmHOX2a(1)                                  <---------ARR11(3)    --------->ANAC58         <-----------GT1                                  --------->ARR14(2)    --------->ANAC58      <---------GLK1(2)                                 <---------CCA1(2)      <---------ANAC55(2)   <---------ARR14(2)                        ----------->GT1         <---------At4g35610   --------->DEAR3(1)        -----                       --------->DAG2           --------->At4g35610  --------->DEAR3(2)       <------NtERF2       *TSS           ---------->DOF2  <---------TOE1(2)--------->ANAC55(2)   --------->ARR14(2)<---- -----------GT1   --------->AHL20(2)------>ZmHOX2a(2)--------->ARR14(2)   ------>NtERF2   <---------- ---------GT1    --------->AHL20(2)<------ZmHOX2a(2) <---------ARR14(2)  --------->DEAR3(1) ---------   tttctccctcttctcccaaataaaaaaagttactcagatctcacgatttgagcagaatacgcaatgaggacaccgacgacgattctccttcttgtcggag  5037700                  <------NtERF2                 ------>NtERF2                 --------->LBD16                <---------ANAC46                --------->RAP2.3(2)                --------->RAP2.3(3)                --------->DEAR3(1)                <---------DEAR3(1)                <---------ATERF1(2)                --------->ATERF1(2)               --------->ATERF1(1)               --------->DEAR4(2)           <---------ALFIN1               <------NtERF2                --------->AtMYB61               <---------LBD16             --------->MYB46(3)               --------->RAP2.3(1)       ------>NtERF2              <---------ATERF1(1)       ----------->HVH21              ------>NtERF2             <---------ETT(1)              <---------RAP2.6(1)     <---------ATERF1(1)              <---------RRTF1(1)      ------>NtERF2              --------->ABI4(2)      --------->DEAR3(1)              <---------RAP2.3(1)   --------->ATERF1(1)              <---------ERF1       <---------ATERF1(1)              <---------DEAR4(2)   ------>NtERF2             --------->DEAR3(1)   --------->ANAC58             <---------DEAR3(1)   --------->DEAR3(1)            --------->RAP2.3(1)   --------->ANAC58            --------->ERF1   --------->CCA1(2)            --------->RRTF1(1)------>ZmHOX2a(2)            --------->ATERF1(1) <---------ATERF1(1)            --------->RAP2.6(1)----------->HVH21           --------->LBD16  <---------ARR14(2)           <---------ATERF1(1)--------->DEAR3(2)           ------>NtERF2    --------->AGP1 <---------MYB55(2)                               <--------           <---------RAP2.3(1)=====================================HOX2a_HOX2a              <--------          --------->ANAC46 <---------At4g35610                                     ------>NtERF2   =================================HOX2a_HOX2a                                 ------>NtERF2<------NtERF2   ==================================HOX2a_HOX2a                     <---------MYB52(1)    <---------DEAR3(1)   ------>ZmHOX2a(1)   <-----------HVH21--------->DEAR3(1)  <------ZmHOX2a(1)  --------->ANAC58 ---->At4g35610--------->ORA47(2) --------->ANAC46    --------->ANAC58         --------->ANAC46 -----At4g35610--------->ERF1<------ZmHOX2a(2)        --------->ANAC58         --------->ANAC58 -HVH21   <---------DEAR3(1)--------->ARR14(2)        --------->ANAC46   ------>ZmHOX2a(1)--------->RAP2.6(3) >ETT(1) <---------LBD16   --------->At4g35610   <---------MYB52(1)  --------->ARR14(2)  <-----------HVH21   ctatcctcttctccggcgccggctatgtcagatccgacgcctccgaccaccgttacaaggaaggagacaccgttcctctctacgccaacaaggtcggccc  5037800                                                  =====================================HOX2a_HOX2a                                                  ------>ZmHOX2a(2)                                                <---------AGP1                                                --------->AGP1                                                --------->ARR14(2)                                                <---------ARR14(2)                                                <---------ARR11(3)                                                --------->ARR11(3)                                                <-----------ARR10                                               <---------CCA1(2)                                     ------>ZmHOX2a(2)                                    <------ZmHOX2a(2)                                    --------->CCA1(2)                                   <---------ARR14(2)                                   <---------ARR11(3)                                 --------->AHL20(2)                                   --------->ARR11(3)                                 <---------AHL20(2)                                <---------HSFB2a(2)     <--------P                 ----------->GT1                      <---------HSFC1(2) --------->At4g35610                       --------->YAB1                      --------->HSFC1(2) <---------At4g35610                      ----------->GT1                  ----------->GT1  --------->ARR14(2)<---------TOE1(3)            <---------YAB1 <-----------GT1 --------->ANAC46  --------->AGP1<------ZmHOX2a(2)              =====================HOX2a_HOX2a -ATERF1(1)    --------->MYB52(1)  <---------AGP1--------->CCA1(2)              <------ZmHOX2a(1)   < -DEAR3(2)    <---------WRKY12  --------->HSFB2a(2)  <---------TOE2(3)    ----------->RAV1(2) ------>ZmHOX2a(2)   atttcacaatccaaggtaaacggaaacatctattctagatctgagcttcagatctgaggttgtttcccattcttaagcctgaggatgataaattgatcgt  5037900                                                              --------->ANAC55(2)                                                              <---------ANAC58                                                              <---------ANAC55(2)                                                              <---------ANAC58                                                 <---------ZAT14                --------->DAG2  <----                                                 <---------ZAT18             ---------->DOF2    -----          <-----------RAV1(1)<-----------GT1     --------->ZAT18   ----------->GT1             <-----       ------->TEIL          --------->MYB52(1)  --------->ZAT14   <---------ZAT6              <----- ---------YAB1      <---------AHL20(2)--------->YAB1--------->ANAC46--------->TOE2(3)---------->DOF2   ttattgttgaatctgttgctattgaattgagtaacgacattgataactgagtacactgcaaaatgcgtaatgttaaaaccaaagagtgaaagaagaaact  5038000                                                                                       <---------ZAT14                                                                                       --------->ZAT14                             <---------At4g35610                                     <---------WOX13(1)                            ------->TEIL                                           --------->ATHB12                            <---------AGP1                 <-----------------AGL2  <---------ICU4              <---------ANAC46------>ZmHOX2a(2)            <---------WOX13(1)     --------->ICU4             ---------->ID1 <---------ARR14(2)       <---------AHL20(2)           <---------YAB1 -----------AGL15           --------->ARR14(2)      --------->AHL20(2)          <---------ICU4 ---------->AGL15        <---------WOX13(1)         --------->YAB1              --------->YAB1     -- ------------AGL3     ----------->HVH21            <---------YAB1              --------->ICU4   <---- ------------AGL2   --------->ANAC55(2)         <---------YAB1                 <---------ATHB12 -----   acatttggaatgtttttcgtttatgtgatggatctgtcttagatttgaatactattatatgactgattttggttttgttcaatgatgattgcagtgagac  5038100  Previous    Next  AGI:  At1g14670.1    Description:  endomembrane protein 70, putative. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G37310.1); similar to endomembrane protein 70, putative [Arabidopsis thaliana] (TAIR:AT2G01970.1); similar to Putative endosomal protein [Oryza sativa (japonica cultivar-group)] (GB:AAK52585.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42436.1); similar to unknown [Picea sitchensis] (GB:ABK24901.1); contains InterPro domain Nonaspanin (TM9SF); (InterPro:IPR004240) Range:  from: 5037607    to: 5040523    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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