Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               --------->AHL20(2)              --------->CCA1(2)                                             --------->AHL20(2)             <---------ARR11(3)                                           --------->TOE2(3)       ------>MYB83                                                      --------->ATHB12       ------>MYB46(1)                                                   <---------ICU4     --------->MYB46(3)                                                  --------->YAB1     <---------MYB55(2)      <-------MYC3                               --------->ICU4     ------->GAMYB           ------->MYC3                       <<<<<<<<<GATA-2   --------->ANAC58         <---------O2                        <<<<<<<<<GATA-4                 <----   --------->ANAC46         --------->O2                        <<<<<<<<<GATA-1               <------   --------->ANAC58       ----------->RAV1(1)                   <<<<<<<<<GATA-3               ------- --------->MYB46(3)     <------NtERF2                         --------->WOX13(1)       <---------YAB1 ------->ANAC46     --------->ANAC46   --------->TOE1(3)    --------->WRKY18(1)  --------->AHL20(2)-- ------GT1   --------->ARR11(3)        --------->TOE2(3)<---------At5g28300<---------YAB1   --------- -DOF2--------->ANAC46  --------->At4g35610      <---------ALFIN1       <---------ATHB12    <--------   ctcacaacccaccaagatatataggcagccacatggtctcaccttaattcaacacattcacagtcaatccacaaatcattaaaaaaaatatgagtgagct  5020000                                     <------ZmHOX2a(2)                               --------->TOE2(2)                               --------->TOE1(2)                               --------->TOE1(3)                      ------>ZmHOX2a(2)                     <---------GLK1(1)                     --------->GLK1(1) ------DOF2          <------ZmHOX2a(2) ---At4g35610       <---------ARR14(2) -->At4g35610       --------->ARR14(2)                                                           <--- ------->YAB1       --------->ARR11(3)           --------->AtMYB61                       <-----------GT1 >ZAT18             <---------ARR11(3)           ------->GAMYB                     <---------AHL20(2) -ZAT18  <-----------------AGL1--------->TOE2(3)--------->MYB46(3)                --------->AHL20(2)   ttcatactctctcccctcttgggatctccataaccttggatcactcttcaaccaaaacttcaatctaggtatagacaacaacgattttatattacagttc  5020100                                             <---------ANAC46                                             <---------ANAC58                                             <---------ANAC58                                            <-------TEIL                                   <---------ANAC46                                         <--------                                   <---------ANAC58                                         ---------                        <---------YAB1    --------->ARR14(2)  ----------->GT1        ------->TEIL          <---------AHL20(2) <---------TOE2(3) --------->AtLEC2                   <---------YAB1        <-----------TBP<---------TOE2(3)  <---------ARR14(2) --------->DAG2     --------->At4g35610     ------->TEIL --------->ATHB12 <---------ANAC58         ---------->DOF2     <---------At4g35610 -------DOF2     --------->ICU4   <---------At4g35610 ---------->DOF2    <-------GAMYB   ------->TEIL   ttttatgtatatttatagaatgatttatgttaagtttgctggtggattcgtgcaaacaaagaaaaagtatattttcgttgtaagatgaatgtatttaatt  5020200                                                  <---------AHL20(2)                                              <---------AHL20(2)                                              --------->AHL20(2)                                              ----------->TBP                                            --------->AHL20(2)                                            ----------->TBP                                          <---------AHL20(2)                                          ----------->TBP                                          --------->AHL20(2)                                        --------->AHL20(2)                                      ----------->TBP                                      <---------AHL20(2)                                      --------->AHL20(2)                                    ----------->TBP --------->AHL20(2)                                    <---------AHL20(2)                                    --------->AHL20(2)     <---------DAG2                                  <---------AHL20(2)----------->TBP                                  ----------->TBP ----------->TBP                                  --------->AHL20(2)<---------AHL20(2)                                ----------->TBP   --------->AHL20(2)                              --------->CCA1(2) <---------AHL20(2)                             --------->ARR11(3) --------->AHL20(2)              --------->ANAC55(1)                             <---------ARR11(3) ----------->TBP                 --------->ANAC46                          <---------TOE2(3) <---------AHL20(2)     <-----------GT1 -AHL20(2)               ---------->DOF2<---------AHL20(2) <----------DOF2      --------->YAB1 >AHL20(2)            --------->TOE2(3) ----------->TBP <-----------GT1  <---------REM1(2) <------ZmHOX2a(1)   tgtgctagtaattcaagaaaatttcattaaagatatatatatatatatatatatatatatacttttttttttctatacacacacataatgtgaggaattt  5020300                                                                   --------->LBD16                                                     <---------AHL20(1)                                                     <---------AHL20(2)                           ---                                                     <---------ARR11(3)                           <--                                   --------->YAB1    --------->ARR11(3)               --------->HSFC1(2)                                 <---------WOX13(1)  --------->AHL20(2)               <---------HSFC1(2)                               --------->ATHB12<------NtERF2     <-----------------AGL1 --------->ARR14(2)          ------->TEIL     ------>NtERF2    <---------LBD16   <---------ZAT14      ------>NtERF2 <---   ------------>CBF       <---------RAP2.3(3) --------->LBD16 --------->ZAT14  <---------LBD16   ----  --------->ANAC58        <---------RAP2.3(2)--------->DEAR3(1)  <---------LBD16  ----------->HVH21  --------->AtLEC2   <---------AtLEC2   ------->TEIL --------->AHL20(1)      <---------ARR14(2)------  --------->ANAC58  <-------TEIL<------------CBF   --------->GLK1(2)        <---------GLK1(1)<-------   ggccatgcaatgtacttgtagatgcatgggggctcattgatgaatcgccggagaatatattctgttcaccggagatggaaatcggggacgtttccaccgg  5020400                                                                      <------ZmHOX2a(1)                                                                   ------>NtERF2                                                                  <---------ANAC46                                                                  --------->DEAR3(1)                                                                 <------NtERF2                                                                 --------->ATERF1(1)                                                                 <----------CDC5                                                                <---------ATERF1(1)                                                                <---------RAP2.3(1)                                                                ------>NtERF2                                                               --------->DEAR3(1)                                                               <---------DEAR3(1)                                                              <---------ABI4(2)              <---------ATHB12                                --------->ATERF1(1)             --------->ANAC58                 ==============================MYC_MYB         --------->ANAC58                     --------->O2    --------->RAP2.3(1)    --------->REM1(2)                         =======================MYC_MYB --------->TOE2(3)                            <---------O2   <---------RAP2.3(1) ------>GLK1(1)                               <---------TGA1a<---------ATERF1(1) -------GLK1(1)                       --------->MYB52(1)    <---------DEAR3(1) ------ARR14(2)                   --------->ANAC58          --------->ANAC46 ----->ARR14(2)--------->ATHB12   --------->ANAC58       <---------WRKY12                  <--------- --->LBD16   --------->ANAC58 <---------------------WRI1 <---------WRKY38(1)      --------->MYB52(1)< --LBD16 --------->ANAC58  --------->ALFIN1   --------->TGA1a------->GAMYB        <---------DOF5.7(2)   ataccttgaagacgcactcattgaattcagtgggagaagcaaacggagacgtctctcgttcaacggcgccgaggacaaaccagataacgatttagaccat  5020500                                                       --------->LBD16                                                      <---------ANAC46                                                      <---------ANAC55(2)                                                      --------->ANAC55(2)                                                      <---------ANAC55(1)                                                      <---------ANAC58                                                      <---------ANAC58                                                 -------->HAHB4                                                 <---------ICU4                                                <---------ATHB51              <-----------GT1                   --------->ICU4                                      <              <---------ICU4                    <---------YAB1                                      <             --------->ICU4                --------->ANAC58                                        <-           <---------ICU4                  --------->ANAC55(2)                                     --          <---------AHL20(2)               --------->ANAC46                                        --          --------->AHL20(2)               --------->ANAC58                                   ------- <---------TOE2(2)--------->ZAT14          --------->ANAC55(1)                               <------- <---------TOE1(2)<---------ZAT14   ---------->ID1 <-----------GT1                           -------- --GT1    <---------YAB1 <----------DOF2   <---------ANAC55(2)             ------->TEIL     <-------- -----------RAV1(2)     <---------MYB52(1)<---------TOE2(3)             <---------YAB1     ------>ZmHOX2a(2)   tctcaggtttatataattactactctgttttttggtttgtcatttacgtaattattccgtatttttcatttgttatgaaactgatttagttgatcgcgga  5020600    <---------ICU4    -------->HAHB4   --------->ICU4  <---------AHL20(2) --------->YAB1 ---------YAB1<---------ICU4 ---------AHL20(2)                                                           --------------------->WRI1 --------AHL20(1)                                                       ------>MYB46(1) ------->AHL20(1)                                                       ------>MYB83<---------YAB1 ------->AHL20(2)                                                     <---------MYB59--------->YAB1 -->LBD16     -------->ATHB1                                  --------->At4g35610 --------->YAB1 --ANAC55(2)  --------->ATHB12       <---------YAB1           <---------At4g35610 <---------ICU4 ->ANAC55(2) <---------YAB1        --------->YAB1             <---------ZAT2 <----------DOF2  <------ -LBD16     --------->GLK1(2)     <---------YAB1            <-----------RAV1(2)  <---------YAB1   <--   atataataatgcagaatcattggggtctgtctgagaattatagttgcacgagtagtcagtttgcaggtgagacctacttctttattattatcacccatat  5020700                         <---------YAB1                                             --------->AHL20(2)                       --------->ZAT6                                        ----------->GT1                    <---------AHL20(2)                              --------->AHL20(2)                   --------->AHL20(2)                             <---------------AGL15     <--------               <---------YAB1               <---------ICU4        --------------->AGL15   --------->GLK1(2)             <---------AHL20(2)            <---------YAB1     --------->AHL20(2)   <---------WOX13(1)            --------->AHL20(2)      <---------AHL20(2)        <---------AHL20(2)<---------AHL20(2) ---CCA1(2) --------->ICU4     <---------TOE2(3)  --------->TOE2(3) <---------AHL20(2)   --------->YAB1 -------AHL20(2)--------->AHL20(2)  --------->AHL20(2)  <---------ZAT18  ----------->GT1<---------KAN4(1)   ttttttgaggcatatttattatttaatactattaacatataaatgatcaatacattagtgctgttttaatataaatagtaagttaattgaataatctttg  5020800                                                                                 --------->HSFB2a(2)                                                                                 <---------HSFB2a(2)                            --------->GLK1(1)                                <---------ANAC46       -                           --------->GLK1(2)                      --------->ARR14(2)                -                           <---------ARR14(2)                     <---------ARR14(2)             ----                           ------->TEIL                           <---------ARR11(3)             <---                           --------->ARR14(2)    <---------ARR11(3)   ------>ZmHOX2a(1)          <---                <---------AHL20(2)               <---------AHL20(1)  --------->TOE2(3)           ---- -ICU4          --------->AHL20(2) <---------GLK1(2)              --------->ARR11(3)             ----   tgaataattttcttatatttaaacagacgaatctccaaattcttccatcaatatatgttctgaagaaaaatcctcaatttcgtcgagaaactctttcgaa  5020900  Previous    Next  AGI:  At1g14630.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G01990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42440.1) Range:  from: 5020375    to: 5021440    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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