Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 ----------->RAV1(1)          ---------->DOF2  <---------At4g35610                   --------->YAB1                                           ---- --------->ARR14(2)               <---------ANAC55(2)                                          <----- ------->TEIL <----------ID1      --------->ANAC55(2) ------->TEIL   --------->YAB1           <------ <---------ARR14(2)          --------->AtMYB61--------->YAB1 ----------->GT1           <---------ATHB12   ttgaatctgccatagagcaacaaaatcaagaccaaaacgtgatcaaaatcaaaatgaaccagagagtaaaatcaaaatttcggtgctcaatgactcaaat  5016200         --------->LBD16        --------->ANAC58        --------->ANAC55(2)        <---------ANAC55(2)        --------->ANAC58                                                            ------>ZmHOX2a(1)        --------->ANAC46                                                           --------->TOE2(3)       <---------LBD16                          <----------DOF2        --------->ARR11(3)   <---------ICU4   --------->DAG2              <---------DAG2         <-----------ARR10          --- ----->TOE2(3)     ---------->DOF2   --------->ANAC58                  <---------ARR11(3)------->GAMYB ------ARR10  --------->TOE2(3)      --------->ANAC58    <---------ALFIN1  <-----------GT1---------->DOF2 ---CCA1(2)----------->RAV1(1)       --------->ANAC46 --------->ANAC46<---------GLK1(2) --------->MYB46(3)   cttattcattccgcaacataaaaaagcagtctttgaatcacacaactatacttttccccccattttctctcaaaatctcaccattcctcaaccaaagaaa  5016300                                                                 --------->LBD16                                                               ------>ZmHOX2a(2)                                                               <---------LBD16                                                               ----------------->AGL1                                                               <-----------------AGL1                                            ---------->DOF2   --------->ARR14(1)                                         <---------HSFB2a(2)  <------ZmHOX2a(2)                                         ============================HOX2a_HOX2a                                         --------->LBD16     --------->ARR14(2)                                         =============================HOX2a_HOX2a                                         --------->HSFB2a(2) --------->GLK1(2)                    ---                                         ------>ZmHOX2a(1)   <---------ARR14(2)    --------->ANAC58                                        <---------LBD16     <------ZmHOX2a(1)      --------->ANAC58                                       ----------->RAV1(2) ----------->ARR10       --------->ANAC46<-            ---------->DOF2         <---------GLK1(1) --------->ANAC46            ------->GAMYB   ---         --------->ANAC46      <---------ANAC58     <---------DOF5.7(2)     --------->YAB1       ----         --------->ANAC58      <---------ANAC58    --------->ARR14(2)    <---------GLK1(1)      -----         --------->ANAC58 --------->At4g35610      <---------ARR14(2)  <---------ANAC58     --------- ------>MYB52(1)          <---------At4g35610     --------->DOF5.7(2)  <---------ANAC58     <--------   aaacagaacacaagcaaagcgatgagagagcttacttgaactcctggaaagcgtaaacggcaggatccggtttgggtatcacaacgcgcaatctctcgaa  5016400        --------->TOE1(2)       --------->HSFC1(2)       --------->ZAT2       <-------MYC3       <---------HSFC1(2)   <-------PIF5       <---------ZAT2       ------->MYC2                                             ------>ZmHOX2a(2)   --------->DEAR3(1)       <-------MYC2                                           --------->ARR11(3)  --------->ANAC58          ------->PIF5                                           <-----------ARR10  --------->ANAC58          ------->MYC3                                       --------->YAB1 ------>ANAC58          <---------ZAT2                                    --------->LBD16 --------ABI4(2)    --------->YAB1                                       --------->RAP2.6(2) ------>ANAC58     <---------YAB1                           <---------ANAC58  --------->ICU4 ----->DAG2    ------>ZmHOX2a(2)                            <---------ANAC58---------->DOF2 ----->DOF2   <------ZmHOX2a(2)              --------->At4g35610         --------->ANAC46<------NtERF2 >HSFB2a(2)  <---------ARR11(3)              <---------At4g35610        --------->RAP2.3(1) -HSFB2a(2)  --------->ARR11(3)           ----------->RAV1(2)   --------->STY1(2)  <---------ARR11(3)   aagcaccgaagctacgatcttatcagagctcgtgcaaaaccctcgcctgctctccaagagaggcttagctagtagccgcaaagatgatctcggcatttct  5016500                                                   <-------GAMYB                                                  <---------MYB46(3)                                                  ------>NtERF2                                                --------->ATERF1(1)                                                <------NtERF2                                                --------->RAP2.3(1)                                               <---------DEAR4(2)                                               --------->LBD16                                               <---------ERF1                                               <---------RAP2.3(1)                                               ------>NtERF2                                               <---------ORA47(2)                                  *TSS                                              <---------DEAR3(1)                                   --                                              --------->ATERF1(2)                            --------                                              <---------RAP2.3(2)                           <--------                                              <---------RAP2.3(3)                           <--------                --------->ANAC58              <---------ATERF1(2)                        <-----------HVH21                --------->ANAC58              --------->DEAR3(1)                        <----------DOF2             <---------ARR14(2)              --------->ATERF1(1)                      ---------------             --------->ARR14(2)         --------->ZAT14                               <--------------           --------->LBD16              <---------ZAT14                              ----------------         ------->GAMYB       <------MYB83<---------DOF5.7(2)                         <---------------       --------->ANAC58      <---------MYB46(3)<---------ATERF1(1)                --------->ARR14(2)       --------->ANAC58      <------MYB46(1) <---------LBD16                      <---------ARR14(2)     --------->MYB46(3)     --------->MYB59--------->ANAC46                 <-----------GT1<---------   caatctcacaacccagaaacgaaatcgagtttggttagagagtgaacgccggcgcttgagcctgagagtgagagggtttttccaaatcccctttcaggta  5016600                        <------------CBF                       --------->ATHB12                                                   <---------LBD16                       <---------ICU4                                                   --------->ARR14(2) ---------->CBF        --------->ATHB51                                  --------->ANAC55(2) --->GT1              --------->ICU4                            <------------CBF        --------->GLK1(2) -TOE1(3)             <---------YAB1           --------->LBD16<---------YAB1            <---------ARR14(2) -TOE2(3)             <---------ATHB51       <---------LBD16--------->YAB1             <---------GLK1(2) >AGL15               <---------AHL20(2)   --------->ARR14(2)--------->AHL20(2)  ------>MYB46(1) -AGL15               --------->AHL20(1)   --------->GLK1(2)<---------AHL20(2)   ------>MYB83<------- ->AGL1  --------->ANAC46                  <---------ARR14(2)<---------AHL20(2)--------->AtMYB61 --AGL1 <---------LBD16-------->ATHB1     <---------GLK1(2) --------->AHL20(2) <---------MYB59<------ --RAV1(2)     ----------->GT1   --------->ANAC55(2)   ------>ZmHOX2a(2) <---------ANAC55(2)---------   aaacaatttcgacggaatcgaaaaattattggtttacataaccagaatccggtttgatctaattaaaattggattacataaccaaaccagaatccggttt  5016700                                             --------->ALFIN1                                  --------->ANAC55(2)              <---------CCA1(1)                            --------->MYB52(2)                     <---------RVE1(1)                            <---------MYB46(3)     <---------------AGL15        <----------DOF2                           <-------TEIL  <---------At5g28300      <---------ARR11(3)        <-------- --MYB52(1)             <------MYB83--------->AHL20(2)            --------->ARR11(3)<---------TOE2(3) ---MYB52(1)            <------MYB46(1) <-----------GT1  --------->DAG2        --------->TOE2(3) >LBD16                --------->MYB59 --------->ICU4   ---------->DOF2 <---------TOE2(3)  --------->AHL20(2)   gctatgcattcggatagatgaaaatttggttcgttcatgtaattacggtgttgacaaaaaaagtaatagatatttagattacctttaagaaaattaacta  5016800                                   ----------->GT1                               --------->CCA1(2)                              --------->ARR14(2)                           --------->AHL20(2)                              --------->ARR11(3)                           <---------AHL20(1)                            <---------TOE2(3)                              <---------AHL20(2)                      --------->AHL20(2)                               <---------AHL20(2)                      <---------AHL20(2)   --------->GLK1(2)          <---------AHL20(2)          <--                  <---------AHL20(2)       --------->ARR11(3)      <---------AHL20(2)             ---                  --------->AHL20(2)     <---------AHL20(2)        --------->AHL20(2)    ----------->GT1          --------->At4g35610 <---------ARR14(2)           <---------At4g35610         ---------->DOF2 ---GT1   <---------At4g35610 <---------ARR11(3)           --------->At4g35610<---------YAB1 <-------TEIL   cacatatatttcatcggaaaataaatatttaagatactggtataaaatctgtgttatacatagctgaatttttttattttatttttgggcaaagttacat  5016900              --------->ARR11(3)                                                   <---------ZAT14       --------->At4g35610                                                         --------->ZAT14   --------->GLK1(2)                                                              <----------DOF2   ------->TEIL              <-----------GT1                                      <---------DAG2   <---------ARR14(2)     <---------ICU4                            <---------ANAC55(2)     ---------   --------->ARR14(2)   --------->TOE2(3)               --------->TOE2(3)        --------->ANAC46 -------At4g35610    <-----------GT1                    <----------DOF2       <-------TEIL  --------- ------>At4g35610 ----------->GT1        --------->TOE2(3)          --------->ANAC55(2)     ---------   agctgaatctgatgaagaaattgtaacattatttcgactcatacatcaaaacataaaactttagtttatcacttaatacatacactttactgaaccataa  5017000                                                                         <---------ALFIN1                                                                      --------->bZIP60(1)                                                                      <---------bZIP60(1)                                                                   ----------->HVH21    --------->WOX13(1)                                            --------->LBD16  <---------YAB1                    <---------O2                 <---------ANAC58             ------- >YAB1 --------->TOE2(2)         --------->ANAC46                --------->ANAC55(2)          <------ >TOE1(3)    ---------->DOF2     ----------->HVH21               <---------ANAC58         <----------DOF2 >TOE2(3) --------->ANAC46     --------->ANAC46                  <---------ANAC55(2)  <---------GLK1(2)   acttatcaatctacgtaaagtcttgggaaaacaacgcgacatgtctcggactatgcagaagaatggtccgtgacaacactctcttatcgattctttttaa  5017100  Previous    Next  AGI:  At1g14620.1    Description:  DECOY (endoxyloglucan transferase A2). similar to hypothetical protein [Vitis vinifera] (GB:CAN73362.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39651.1); contains domain PTHR13124:SF2 (PTHR13124:SF2); contains domain PTHR13124 (PTHR13124) Range:  from: 5014748    to: 5016599    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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