Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                                -----             <---------ARR14(2)                                                                ------             --------->ARR14(2)                                                                <-----        --------->WRKY18(1)    ----------->RAV1(1)                                             ------      ----------->GT1    --------->GLK1(1)                                                     ------   --------->MYB52(1)   <---------ARR14(2)                                                     <-----  <---------ARR14(2)    --------->ARR14(2)                                                   --------  --------->ARR14(2)<------NtERF2                 ----------->GT1                       --------->YAB1 --------->MYB46(3) <---------At4g35610--------->ICU4                                --------->GLK1(1) -------->ANAC58  --------->ANAC46------->GAMYB  ----------->GT1          <----------DOF2  ---------- -------->ANAC58 <---------LBD16 --------->MYB46(3)         <---------GLK1(2)        <---------GLK1(1)   gcaagaaccggtcaaaattcgcggcagatttcgcaacagccatgatcaagatgggtaatatagaacctctcactggctctaatggagaaatcagaaagat  4980300    <----------DOF2  <---------ZAT2  --------->At4g35610  <---------At4g35610 ------->TEIL ---->CCA1(2)                                            <---------AHL20(2) ---->GLK1(1)                                           --------->AHL20(1) --->ARR11(3)         <---------ANAC58                  <---------AHL20(1) ----ARR14(2)         <---------ANAC58                  <---------AHL20(2)       --------->ICU4 --->ARR11(1)       --------->AtLEC2                <---------AHL20(2) <----------DOF2 --->ARR14(2)--------->AHL20(2)                 <---------MYB46(3)  ------>ZmHOX2a(2) ----ARR11(3)<---------AHL20(2)         <---------AHL20(2)        --------->ARR11(3)                - --->ARR10   <---------ICU4           <---------AHL20(2)--------->AHL20(2) ---------->ID1  --------->ICU4 >DOF2----------->GT1<-------TEIL  ------->TEIL ----------->GT1   <---------ARR11(3)    <---------YAB1   atgcagctttgttaattaatacatgcatgcgataatgcattttatattgtttgttaaatttattcgttgatctctttgttgtaatgttttgtgattctta  4980400        <---------ANAC46   ------>MYB83                                                                                     <   ------>MYB46(1)                                       --------->AHL20(2)  <---------YAB1         < --------------->AGL15                                  <---------YAB1     --------->YAB1           < <---------------AGL15                                --------->YAB1      <---------YAB1      <------ <---------MYB59                          --------->WOX13(1)     --------->YAB1             <-------- ---------------->AGL1            --------->AHL20(2) <---------YAB1    <---------AHL20(2)--------->ANAC46   ctaccaaattgtgtattatttgtttttaatatttgaataaatgccaattagttttatgattatatagtcatattttttgataattcaatccaagttacaa  4980500                                    --------->GLK1(2)                                    ------->TEIL                                    <---------ARR14(2)                                    <-------MYC3                                    --------->ARR14(2)                              --------->ANAC46                                    <---------ARR11(1)                              --------->ANAC58                                   <---------GLK1(2)                                --------->AtLEC2                                   <---------ARR14(1)                               --------->ANAC58                               --------->MYB52(1)                                 <---------ALFIN1                              <---------ALFIN1                                --------->ZAT18                              ------->GAMYB                                   <---------ZAT14                             <---------MYB52(2)                               <-------TEIL------->MYC3                             --------->MYB46(3)                               <---------ZAT18                             <---------MYB55(2)                               --------->ZAT14                             <---------MYB111(2)                           <---------ANAC46  <---------MYB46(3)        -------->P                                     <---------ANAC58     ----- ---------ANAC58            ------>MYB46(1)                                <---------ANAC58    ------ ---------ANAC58            ------>MYB83                               <------------CBF  --------->O2 ---------ANAC46          --------->AtMYB61               <---------ZAT6  <---------MYB46(3)   <----- ---YAB1                 --------->MYB46(3) ----------->GT1          --------->ARR11(3)  <---------O2 ---GT1       <---------ANAC46--------->AtMYB61    <---------YAB1    <---------ARR11(3)----------->RAV1(1)   ttgctggttcaatgtggtttgggctaaaccaaccaccgaatctgtatggttttatttttagagttccaccatatattgggtgcaccatgccacatggaat  4980600         --------->DAG2       ---------->DOF2   <---------MYB59   <---------------AGL15   --------->TOE2(3)   --------->TOE1(3)   --------------->AGL15  ----------------->AGL2                                                      <-----------GT1  <-----------------AGL2                                <---------ZAT14     <---------HSFB2a(1)  ----------------->AG                             <---------ATHB12         <---------HSFC1(2)  <-----------------AGL3                       ------------>CBF             --------->HSFB2a(1)  ----------------->AGL3                   --------->LBD16                  --------->HSFC1(2)  ----------------->AGL1                  --------->ANAC46                 --------->ARR14(2)  <-----------------AG                    <---------ANAC58                 <---------ARR14(2)  <-----------------AGL1                  <---------ANAC58          ----------->HVH21 ---->ICU4                      ----------->GT1--------->MYB46(3)  ------->MYC3       <---------HSFB2a(2) --->GLK1(1)                --------->ANAC58  ------>NtERF2        <-------MYC3      ----------->GT1 ----GLK1(1)                --------->ANAC58----------->HVH21      *TSS <---------MYB59      --------   tcttacctaaaaaggtatctctgtttcttcaagcctgtgaaaatgcgcgaccaatgagtaaacagagcatgtgaccgaattttcgaatcgagaaaaccat  4980700                                                                    --------->ARR14(2)                                                                    <-----------ARR10                                                                    <---------ARR14(2)                                                                    ------->TEIL                                                                   <---------GLK1(2)                                                                   <---------CCA1(2)                                                                 --------->LBD16                                                                 ------>ZmHOX2a(1)                          <---------ANAC58          =======================RAV                          <---------ANAC58          ----------->RAV1(1)                      <---------At5g28300         --------->At4g35610                 ------->TEIL                     <---------At4g35610     ------>ZmHOX2a(1)<---------LBD16         <-----------TGA1 ----------->RAV1(2)    --------->TOE2(3)<-----------GT1          <-----------HVH21<---------LBD16                 <----- ->MYB46(3)   --------->ANAC55(2)         ---------->CDC5--------->AHL20(2)   <---------MYB52(1)   cgtcttccttatttctacgtattttacggcgagcctctagtcgctcatcgtcagccccataaatttcctgaatcttctccgataacttcgtcttatatac  4980800                                                                                <------MYB46(1)                                                                  --------->HSFC1(2)                                                                  <---------HSFB2a(1)      --------->ARR14(2)                                                                  --------->HSFB2a(1) <---------MYB52(1)                                                                  <---------HSFC1(2)--------->MYB52(2)                    ------>ZmHOX2a(1)                     --------->LBD16       <---------MYB46(3)                --------->ARR14(2)                       --------->ANAC58       <------MYB83 ------>ZmHOX2a(2)                <---------ARR14(2)                       --------->ANAC46   --------->ATHB12<--------         --------->HSFC1(2)             ----------->GT1  --------->ANAC58  <---------YAB1  <---------ARR14(2)         <---------HSFB2a(1)           <------MYB46(1)  <---------LBD16 ============================HOX2a_HOX2a         --------->HSFB2a(1)           <------MYB83  <---------GLK1(1)  ------>ZmHOX2a(1)  <---------AGP1  ----------->RAV1(1)                <--------P     ------->TEIL ------->TEIL <---------WOX13(1) --TEIL  <---------HSFC1(2)     --------->MYB52(1) <---------CCA1(2)<-----------GT1<-------TEIL   atcgccacagaaatttcggttcctgttcgtgaattagcggtagggtttcatttgtatctccgcaacgaattttcctattgattggttcgtttggatctga  4980900                                <---------MYB46(3)                                                 <-                              <-------GAMYB                                                        --                             --------->MYB55(2)                                                <-----                             --------->MYB46(2)                                              ------>ZmHOX2a(2)                             --------->MYB52(2)                                             <--------                             --------->MYB111(1)                                     --------->ARR14(2)                             --------->MYB111(2)                                     --------->ARR11(3)                             <---------MYB46(3)                                      <---------ARR14(2)                            <--------P                                               --------->GLK1(2)                        --------->DAG2           --------->TOE1(2)      --------->At4g35610<---------ARR14(2)     --------->ATHB12 ---------->DOF2 <---------MYB52(1)                <---------At4g35610--------->ARR14(2)    --------->ICU4 <---------------AGL15 --------->At4g35610           <-----------RAV1(1) <---------ARR11(3) -At4g35610       ------>ZmHOX2a(2) --------->MYB52(2)      <---------YAB1<---------ANAC46 <---------AGP1   gaggtattgatttcgatcgatctcaaaagggtagttgttcgtttgctcaatcgaacgagattgttattgttttctgctgtggaatagtatctggatctgt  4981000                                                          <--------P                                                          <---------WOX13(1)                                                         <-------GAMYB                                            <---------ARR11(3)                             --------->MYB52(1)         <---------MYB46(3)                          --------->At4g35610        <-----------RAV1(1)                        <---- --------At4g35610        <---------At4g35610 ------>ZmHOX2a(2)                             <-------- ------->At4g35610  --------->ATHB12        --------->ARR11(3)<---------YAB1            <-------GAMYB ------HVH21       <---------YAB1     --------->ATHB12 <---------AtMYB61               <---------ZAT6 -At4g35610      <-----------GT1     --------->ICU4  --------->ALFIN1         --------->ATHB12  -----   cagattaataggctagtttttacgattgagctatcggaaatgatttgatcttcatgtgtggttgatcatcgaagagtgtttcattgagactgttaatgaa  4981100                                                                     <---------GLK1(2)                                                                   <---------TOE1(2)                             <----------DOF2                       <---------TOE2(2)                       <---------ARR14(2)               <---------HSFB2a(2)                       --------->ARR14(2)               --------->HSFB2a(2)                       ---                       <-----------ARR10               <---------LBD16                          -----                       --------->GLK1(2)     <---------SPL7       <-----------RAV1(2)           <----                      <---------GLK1(2)     --------->TOE2(1)<---------GLK1(1)                 ------                   <------ZmHOX2a(1)       ---------->ID1    --------->GLK1(1)                 <----- -----YAB1      <------ZmHOX2a(1)   <---------GLK1(2)  <---------ANAC46                    --------->YAB1 -TOE2(3)     --------->ALFIN1    <---------TOE1(3)  <---------ARR14(2)             <---------GLK1(1) -->TEIL     <------ZmHOX2a(1)   <-----------GT1     --------->ARR14(2)             --------->GLK1(1)   tattgctgtaagagaggaggaggagaatctgcttttaagcttctcgtcgtactcgtttctgggatttctcaggttctcaagtttggatttcaataagaaa  4981200  Previous    Next  AGI:  At1g14550.1    Description:  anionic peroxidase, putative. Identical to Peroxidase 5 precursor (PER5) [Arabidopsis Thaliana] (GB:Q9M9Q9;GB:Q9MA28); similar to anionic peroxidase, putative [Arabidopsis thaliana] (TAIR:AT1G14540.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46723.1); contains InterPro domain Plant peroxidase; (InterPro:IPR000823); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016) Range:  from: 4979023    to: 4980319    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g14560.1    Description:  mitochondrial substrate carrier family protein. similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT4G26180.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83681.1); contains InterPro domain Graves disease carrier protein; (InterPro:IPR002167); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067) Range:  from: 4980667    to: 4983279    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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