Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <------ZmHOX2a(1)                                               --------->MYB52(1)                                   <                        <----------DOF2       ----------->HVH21                                     <                 ------>NtERF2              --------->ANAC58                                        -                --------->DEAR3(1)          --------->ANAC58                                        -              ------>NtERF2               <-----------RAV1(2)                      <------NtERF2   <-              --------->LBD16  ----------------------->TaNAC69(2)                 ------>NtERF2 <----  ------>ZmHOX2a(1)  --------->GLK1(2)--------->LBD16----------->HVH21           <----------ID1 ----- -------ALFIN1<---------At4g35610  ------>ZmHOX2a(1)<-----------HVH21            <---------ANAC46 <--   cctcctcttccccttccgccgagtttctttgctcttcctccgtagcaggtaaccggtgataggaagggttcttgaaactagtggcgacgaagtaaacagt  4958900    --------->ATERF1(1)    <------NtERF2   <---------ATERF1(1)   <---------RAP2.3(1)   ------>NtERF2   --------->RAP2.6(2)  <---------ATERF1(2)  <---------DEAR3(1)  --------->ATERF1(2)                                <---------DEAR3(1) --------->ATERF1(1)                                <---------LBD16                       ----------- ---------RAP2.3(1)         --------->MYB46(3)      <-------TEIL                          <----------ID1 ---------ATERF1(1)       --------->ARR14(2)        --------->SPL7                        --------->ZAT18 ----->NtERF2             ------->TEIL             --------->ALFIN1                <---------TGA1a -------->LBD16           <---------ARR14(2)      <-----------HVH21                ================== --------RAP2.6(2)  ----------->HVH21       <---------LBD16        --------->At5g28300 --------->ALFIN1 -----ARR14(2)      --------->DEAR3(1)      ----------->RAV1(2)   ----------->GT1  <---------O2 ---->ARR14(2)   --------->TOE1(2)     <----------DOF2--------->LBD16    --------->ARR11(3) -------LBD16 <------ZmHOX2a(1) --------->DEAR3(1)<---------SPL7 <---------DEAR3(1)==================   tccggcggcaacgagaggaccagcgacgaatccaccgatgactttcccctgaggtccggcgagagagacggtgaagaaattggagacgggaggggacaag  4959000                                                            ---------->DOF2             <------NtERF2                                                        <---------LBD16                --------->LBD16                                                        --------->LBD16              <---------LBD16                             --------->LBD16           <---------ANAC46             ------>NtERF2                            <---------ANAC46           <---------ANAC58           --------->ATERF1(1)                            <---------ANAC58           <---------ANAC58          --------->ZAT2    --              --------->ALFIN1 ----------->HVH21   <----------DOF2               --------->At4g35610    <------ZmHOX2a(1)       <---------ANAC58      <---------HSFB2a(1)           --------->ARR14(2) --   <------MYB46(1)         <---------LBD16        --------->HSFB2a(1)       <-----------RAV1(2)  <---   <---------TOE1(1)       <-----------------------TaNAC69(2)      --------->ICU4<---------ZAT2 -----   <------MYB83     <------ZmHOX2a(1)             --------->HSFC1(2)--------->ATHB12--------->MYB52(1)  --------->MYB111(2)---------->DOF2              <---------HSFC1(2)<---------MYB46(3)<---------ANAC46 <--------P  <------ZmHOX2a(1)<------NtERF2  <------ZmHOX2a(2)     <---------YAB1<---------At4g35610 >HVH21 --------->ALFIN1 --------->ALFIN1   --------->ARR11(3)--------->ANAC58  <---------ARR14(2) -- =========MYC_MYB   ================================HOX2a_HOX2a  --------->MYB52(1)----------->HVH21 ===============================bZIP_DOF    <---------ARR11(3)--------->ANAC58 <------ZmHOX2a(1)-----   gaggtaggaggtagaggagggaggaaagtggcggagacagagagaagatcgaactttccgtggaaagtaatggttgagccaggagctgccggagaaggct  4959100                                                                     --------->MYB52(1)                                                                    --------->ARR14(2)           --------->TGA2(2)                                    <------NtERF2         <---------TGA2(1)                                      --------->At4g35610         --------->TGA2(1)                                     ----------->RAV1(1)         --------->bZIP60(1)                                   ------>NtERF2         <---------bZIP60(1)                                  --------->ANAC46                      -  ---------->DOF2      ----------->RAV1(2)                   --------->LBD16                       <- ------->ANAC58       ------>NtERF2                   <---------ANAC58                             -- ------->ANAC46      <---------ARR14(2)           <---------MYB52(1)<---------ARR14(2)          ----- ------TGA2(2)     ------->GAMYB           ---------->DOF2   <---------LBD16                    <---- ------>HVH21 --------->At4g35610      --------->ANAC58   <---------At5g28300           ------->GAMYB ------->ANAC58 --------->MYB52(1)     --------->ANAC58<----------DOF2                 --------->ANAC46 ------>TGA1 --------->ANAC46        <------ZmHOX2a(1)<---------ANAC58            <----------DOF2 <--   gacgcaaagtgacatcagcaacggagcctgagccactgaggacgcaaaagccgatggctttaccgcggcagaaacggtttagggcttcaacgacatcgtt  4959200                                                                                                    -                                                                                                    -                                                                                                   --                                                                                                   --                                                                                                  <--                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                              =======                                                                                              -------                                                                                              <------                                                                                              -------            <---------HSFB2a(2)                                                               <<<<<<<            --------->HSFB2a(2)             <----------ID1                                    <------  --------->SPL7                          ----------->GT1                                     <------ -------->LBD16                       <---------WRKY38(1)                                   <-------- --------HSFB2a(2)                    <---------WRKY12                    <---------HSFB2a(2) ------- ------->HSFB2a(2)                   --------->WRKY18(1)       <---------TOE2(3)           ---------- ---->ARR14(2)                      <-----------HVH21       ========================================= -----ARR14(2)         <------ZmHOX2a(1)  --------->YAB1    <----------DOF2  --------->ARR14(2)<----- -------LBD16  <------ZmHOX2a(1)<------ZmHOX2a(1)  --------->ATHB12       --------->HSFB2a(2) <------   tccggatggcacttcgaggatgtaaggactcataggagggtcaatggtgacaaagattggagctttaggtttgtttttggaacctcgaggtctgccacgt  4959300     <---------ALFIN1     ------------>AtMYB77     --------->MYB52(1)    ----------->HVH21    <---------SPL7 ------>NtERF2 -------->ANAC58 -------->ANAC58 ------->SPL7 ------->ATERF1(1) -------ATERF1(1) ---->ALFIN1 --MYC4 ->MYC4 ->PIF5 ->MYC3 --MYC3 --MYC2 ->MYC2 =================MYC_MYB                                    --------->ZAT2 -->O2                                                       <---------ZAT2 ---ANAC46                                                   <---------HSFC1(2) -->PIF3(3)                                                  --------->At4g35610 <<<HY5                                                      <---------HSFB2a(1) ---PIF3(3)                                                  --------->HSFB2a(1) ---TGA1a                                             <---------ZAT14       <-----------GT1 -ALFIN1                                <-------TEIL  --------->ZAT14      <---------AHL20(2) -->TGA1a                              --------->ALFIN1      --------->HSFC1(2)    --------->HSFB2a(2) ------>PIF3(2)          --------->ALFIN1             --------->REM1(2)   --------->AHL20(2) ===bZIP_DOF  <---------AtLEC2      --------->ALFIN1 --------->ALFIN1----------->RAV1(1)            - --PIF5 <---------DEAR3(2)  --------->ALFIN1 <-----------RAV1(1)  --------->HSFB2a(2)        <------- ---O2  <---------MYB46(3) <------ZmHOX2a(1) --------->ALFIN1<---------At4g35610<----------DOF2     -   ggacgcccgacggtttccatggagggagaggagggagagaggtgcaagtgtcgctgtgtagggagcttcgacaacatttaatcttttggaattttgtgtt  4959400                        <------MYB46(1)                        ----------->GT1                        <------MYB83                       --------->MYB111(1)                       <---------MYB46(3)                                        --------->KAN4(2)                       --------->MYB111(2)                                       --------->ARR14(2)                       --------->MYB46(2)                                        <---------ARR14(2)                      <---------MYB55(1)                                        --------->KAN4(1)                      <--------P                                                <---------KAN4(1)                     <-------GAMYB                                              <----------TaMYB80                    <---------MYB46(3)                                         ----------->ARR10      <-------TEIL  <------MYB46(1)                                            ---------->TaMYB80 -------->YAB1      <------MYB83                                               <---------KAN4(2) --ZAT6            --------->MYB59                 ---------->DOF2     ------>ZmHOX2a(1)           -- --------->DOF2    <---------AtMYB61         ------->TEIL              <----------DOF2         <-----   aataaagatgcagagagaggtttggttggtatatatgagatgtactgtatgtataaagacgactagtctaatccttttgggaatatactcgatgggcctt  4959500           --------->TOE2(3)       ------->GAMYB      <---------MYB52(2)      <------------MYB.PH3(2)                                <---------HSFB2a(2)      --------->MYB46(3)                               --------->ARR14(2)    ----------->RAV1(1)   <---------ICU4               <---------ARR14(2)   <----------ID1        <---------ATHB12          <-------TEIL <---------GLK1(2)          <------NtERF2 --------->ANAC58      ------>MYB46(1)         <---------ICU4--------->HSFB2a(2)   ------>ZmHOX2a(2) --------->ANAC46      ------>MYB83            --------------->AtSPL3             <------ZmHOX2a(2) --------->ANAC58 <-----------GT1      ----------------------->TaNAC69(2)        ------->TEIL   ----- -------->DOF2--------->YAB1    <----------DOF2<---------------AtSPL3            <---------ARR14(2) -----DOF2 <----------DOF2--------->YAB1       <---------------AtSPL8            --------->ARR14(2)   tcaaagcaacaaactttaataaacccactcattactttagagtttagaataagtacgtttctgccagaagctcattttctatggatccaaggcctcaaca  4959600      --------->ARR14(2)      ------->TEIL      <---------ARR14(2)                                         --------->WOX13(1)      --------->GLK1(2)                                      <---------ZAT6   <---------------AGL15                                <---------ANAC58                   --------->TOE2(3)  <-----------------AGL2              <---------WOX13(1)<---------ANAC58                   --------->TOE1(3)  <-----------------AGL1           <---------YAB1    --------->LBD16                 ----------->GT1 --------->ZAT2                  <----------DOF2    <---------ANAC58            --------->ALFIN1 <---------At4g35610          <---------YAB1     --------->GLK1(2)            <---------ANAC58 --------->At4g35610     <----------DOF2         --------->ARR14(2)           <---------ANAC58 <----- <---------ZAT2      ----------->HVH21<---------YAB1<---------ANAC58    <---------TOE2(3)  <--------- -->GAMYB   <--------P  <---------ANAC46         <---------ARR14(2) --------->YAB1 <---------ANAC46--   ggctgctgaatctggtagcatcggtgacttttatgctttgattaatgagagaatccgtgcttactgtcaatcttgaggtagagtgtcgagtaactttaat  4959700                                                                                      --------->At5g28300                                                                                      <---------MYB52(1)                                                                                     ----------->GT1                                                                                     --------->LBD16                                                                                 --------->ARR14(2)                                                                                 ------->TEIL                                                                                 <---------ARR14(2)                                                                           --------->LBD16                                                                         <---------LBD16 ----TOE2(3)                                                            --------->MYB52(1) -DOF2                                                                  -------->P <---------LBD16 ----->TEIL  <---------ZAT6           --------->CCA1(2)               ------>ZmHOX2a(1)          ----   gtatccaaaatgtgagtgttaatggtcagaatgctctgtgatatgaaaaatagatttgaacttgtccaagtccttaccggatgaatccggtaaatgaggc  4959800  Previous    Next  AGI:  At1g14490.1    Description:  DNA-binding protein-related. similar to DNA-binding protein-related [Arabidopsis thaliana] (TAIR:AT5G49700.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74013.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61615.1); contains InterPro domain Predicted AT-hook DNA-binding (InterPro:IPR014476); contains InterPro domain Protein of unknown function DUF296 (InterPro:IPR005175) Range:  from: 4958509    to: 4959320    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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