Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <---------TOE1(2)    --------->ANAC46                                                                               --  <-----------GT1        ----------->GT1                                                        ----- >YAB1        <---------TOE2(2)              <---------GLK1(1)                                  ----- >AHL20(2)   <-----------RAV1(2)        ---------->DOF2         --------->YAB1   --------->YAB1 -----   catttcacaacattctcaggtttaagcgagttatacaaaaacaaaagaaatcagttttatatgtaagcataaaaactaagcactcatacactaactaaac  4947200         --------->AHL20(2)    <------ZmHOX2a(2)                                                                             <--   --------->ARR11(3)                                                                         -------   <---------ARR11(3)                                                                     --------->YAB1 --------->ICU4                                                                           <---------ICU4 -------->DOF2                                                                           <---------ATHB12 ---->ANAC58                                 <---------ATHB12                          --------->WOX13(1) ---->ANAC58<---------TOE2(3)              --------->WOX13(1)                       ------->TEIL  --- ---->ANAC46>>>>>>>>>MYB98   --------->REM1(1)--------->YAB1            ----------->RAV1(1) <--------   gcaaagatcaatttaacatagacgagaaactacatctctacgttccaatcaaacgaagaaaaattcaaaattagcgacacaaaatgaatcaatcatcaaa  4947300                                                                                                    -                                                                                                   --                                                                                                   <-                                                                                                  ---                                                                 --------->At4g35610              <--                                                           --------->ALFIN1                       <--                                                           <---------AtMYB61                      <--                                                           <---------ANAC46                       ---                                                         <---------MYB46(3)                       ---    --------->TOE2(3)                                <-----------RAV1(1)           ---------->DOF2<-- <<<<<<<<<GT-1                           <---------At4g35610     <---------At4g35610      <---------- <-----------GT1                         --------->ZAT2 --------->ALFIN1       <----------ID1<------- -------ARR11(3)            <---------ZAT14          ------>ZmHOX2a(1)        ======================= --->DOF2            <---------GLK1(2)   --------->ZAT14<---------AtMYB61     ======================= ------>ARR11(3) ---------->DOF2         --------->At4g35610<---------MYB46(3)<------ZmHOX2a(1)  <--- -YAB1        >>>>>>>>>TBF1 --------->ZAT14         <---------ANAC46--------->ATHB12    <----------DOF2   gatttacctcatcgaagaagaaagatgctcttcagtgagacggagcagtctgttcctggtggtggtgagatgatttggaaggagccaaagctttgttgta  4947400                                           <-----------------AGL1                                     <------NtERF2                                   --------->DEAR3(1)                                   <---------DEAR3(1)                                  --------->RAP2.3(1)                                  --------->ATERF1(1)                                  <------NtERF2                                 ------>NtERF2        --------->At1g77200      <---------ATERF1(1)        --------->DEAR3(1)      --------->DEAR3(1)       --------->DEAR3(2)       ----------->HVH21       --------->MYB46(3)       <---------DEAR3(1)  --------->At4g35610          --------->ATERF1(1)  <---------At4g35610          --------->RAP2.3(1) ----->ZmHOX2a(2)              <------NtERF2 ------->CCA1(2)              <---------ERF1 -----ZmHOX2a(2)              <---------ATERF1(1) ------>ARR14(2)              <---------DEAR4(2) -------ARR14(2)              <---------RAP2.3(1) -------ARR11(3)              <---------ORA47(2) -------AGP1                  ------>NtERF2----------------->AGL1                         <---------ANAC58 ------>AGP1                 <---------RAP2.3(3)                                          <---------ANAC58 ------>ARR11(3)             <---------RAP2.3(2)   <---------HSFB2a(2)                   --------->HSFB2a(1) ---------ARR10              <---------DEAR3(1)    --------->LBD16                       --------->HSFC1(2) -RAV1(1)                    <---------RAP2.6(2)   --------->HSFB2a(2)                   <---------HSFC1(2) --REM1(1)                  --------->ATERF1(1)   <---------LBD16                        <---------HSFB2a(1) ======HOX2a_HOX2a        --------->DAG2<---------ARR14(2) <---------ANAC58    --------->ANAC58 =====HOX2a_HOX2a   --------->ANAC46------>NtERF2<---------LBD16               --------->ANAC58   --- ------CCA1(2)  --------->CCA1(2)<---------RAP2.3(1)       <---------ANAC58  ---------->DOF2   ------   gatctgctcaccgacgagataaacgcagaaggcggcgacgccgattccaagtccgggaagagcgtgtctcatttgattcgaaagcatcggatgcttcctc  4947500                                    ---------->DOF2                                  <---------HSFB2a(2)                              --------->KAN4(2)                          <---------MYB46(3)                                      --------->ZAT18              <------NtERF2<-------GAMYB                                          <---------SPL7             ----------->GT1 <---------MYB46(3)                                   <---------ZAT14             --------->LBD16<--------P                                          --------------->AtSPL3           <---------LBD16<---------DEAR3(2)            <---------TOE2(2)    ----------->HVH21   <---------CCA1(2)     <---------DEAR3(1)             <---------TOE1(2)----------->RAV1(2)       <- ------------------>WRI1<---------LBD16   <---------ATERF1(1)          *TSS------>ZmHOX2a(1)    <---- >ZmHOX2a(1)--------->LBD16<---------MYB52(1)          <-----------RAV1(2)--------->TOE1(2) ------>ZmHOX2a(1)   cattcatctcttcgccggaaaaattcgccggttgttcccaaaggcttcgccattttctcaggtattcgattaatctcctgcgaccgtactattcctctta  4947600                                                                <-----------HVH21                                                               <---------bZIP60(1)                                                               --------->ETT(2)                                                               --------->bZIP60(1)                                                     --------->AHL20(2)                                                     <---------AHL20(2)                             <----------DOF2        <---------AHL20(2)                          <----------DOF2           <---------AHL20(1)                     --------->ATHB12                   --------->ATHB12            --------->AHL20(2)                   <---------TOE1(3)                   --------->YAB1            <----------DOF2  ---------->ID1        <---------TOE2(3) ---------DOF2     <---------ICU4<---------TOE2(3)  --------->AHL20(2)           <----------DOF2 -------GT1       <---------ATHB12   ------->TEIL   --------->AHL20(1)     <----------DOF2<---------YAB1   actttcttctcaaatgacaaatcatgggcttctttgatgtatatgggctttaaatttattttttgtcgtcatatgggctttaactttaggttatcatttg  4947700                                                                                          <---------AHL20(2)                                                                                          --------->AHL20(2)                                                                                        --------->ANAC55(2)                                                                                        ----------->GT1                                                                                        <---------ANAC55(2)                            <---------ICU4                                      <---------ANAC46                            --------->YAB1                                      --------->ETT(1)                           --------->ICU4                                <---------AHL20(1)                         --------->YAB1                                  --------->AHL20(1)                       --------->AHL20(2)                                --------->AHL20(2)                 ----------->GT1                                         <---------AHL20(2)     <----            --------->AHL20(2)   ----------->GT1           <----------DOF2<---------AHL20(2)  <------   <----------DOF2----------->GT1<---------ANAC46  <---------YAB1  --------->YAB1     --------->ICU4   ggcttcttttgaaaaaaaatcggaaaataataatgtcgtaaactagttttcttatggttctctttaatatcaaaatataatgtcggaaataagtaattaa  4947800                                                                        <---------ANAC58                                                                   --------->AHL20(2)     <---------AHL20(2)                                  ----------->GT1<---------ANAC58     <---------YAB1                           --------->YAB1       <---------AHL20(2)     --------->AHL20(1)                       -------->ATHB1      <---------AHL20(2)    --------->AHL20(2)                 --------->GLK1(1) <---------MYB46(3)                         -    --------->YAB1            --------->AHL20(2)<---------YAB1 --------->AHL20(2)           <-------- --------->YAB1           --------->AHL20(2) <---------YAB1<---------YAB1               --------->AHL20(2) -----TOE2(3)            <---------AHL20(2)  <---------ATHB12 <---------YAB1            <---------AHL20(2) ---AHL20(2)             --------->AHL20(2)--------->WOX13(1) --------->ICU4      ----------->GT1  --   gtttaataatattgcatagcatcatatataaattatatcagaaatctatcattgtagagttgttattatttatttcttgttaaacagaaaataaatacaa  4947900                                       <---------YAB1                                   <---------ANAC58                            <----------DOF2                                 --------->At4g35610      --------->YAB1       ------>ZmHOX2a(2)                            ------>ZmHOX2a(2) -------->At5g28300      <---------ARR11(3)                           --------->ARR11(3)--------->ARR11(3) -------AGL15            --------->ARR11(3)     <----------DOF2       <---------ARR11(3)<---------ARR11(3) --------->GT1   --------->ARR11(3)<---------ANAC58          ----------->RAV1(1)   --------->AHL20(2)   atggtaaatcatagtgaaacatctactgatctttctagcttatgactctggtttatgggaagacaacatagtgatctcatcagaaaaaaatgtcttcagg  4948000                                                                     <----------DOF2                                                                   <---------RVE1(1)                                                                   <------ZmHOX2a(2)                                                                   =================HOX2a_HOX2a                                                                  <---------ARR11(3)                                                                  --------->ARR11(3)                                                                  --------->GLK1(2)                                                                  --------->ARR14(3)                                  <------MYB83                    <---------ARR14(3)                                  <------MYB46(1)                 --------->ARR14(2)                                  <---------ANAC46                <---------ARR14(2)                                 <---------AtMYB61                <-----------ARR10                                 --------->ALFIN1                <------ZmHOX2a(1)                          <---------ANAC46                    =============HOX2a_HOX2a                          <---------ANAC58                    <------ZmHOX2a(1)                          <---------ANAC58                  --------->ALFIN1                       <---------RAP2.6(2)                 ================HOX2a_HOX2a                      <---------At4g35610                  <------ZmHOX2a(1)                      --------->At4g35610             =====================HOX2a_HOX2a                     <---------DOF5.7(2)              --------->HSFB2a(2)    <------ZmHOX2a(1)                     --------->MYB52(2)               <---------HSFB2a(2) <-----------RAV1(2)                   <---------MYB52(1)<---------MYB46(3)    ===============HOX2a_HOX2a              <-                   --------->DOF5.7(2)                ------>ZmHOX2a(1)   ===========================                ---------->ID1 <---------ANAC58       ====================HOX2a_HOX2a       <--------            <---------ANAC58   <---------ANAC46      <---------LBD16------>ZmHOX2a(2)     <----------            <---------ANAC58   <---------ANAC58     <---------ANAC46================HOX2a_HOX2a   <--   cataaacatggtgttcttgtcgttagcggcttggcttggtggatgatgaccatgtcctggaggaggaggatcttttgcaggagaagatggaactgttggg  4948100  Previous    Next  AGI:  At1g14450.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G02510.1); similar to unknown [Populus trichocarpa] (GB:ABK94107.1) Range:  from: 4946213    to: 4947571    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g14455.1    Description:  unknown protein Range:  from: 4947814    to: 4948395    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version