Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------->YAB1               <---------ICU4              <---------YAB1            --------->YAB1           <---------YAB1               --------->AHL20(2)        --------->AHL20(1)             --------->AHL20(2)        <---------AHL20(1)             <---------AHL20(2)        <---------AHL20(2)         --------->AHL20(2)             ------>MYB83        --------->AHL20(2)       ----------->GT1                  ------>MYB46(1) ------>ZmHOX2a(1) ----------->GT1               ---------->DOF2         <----------DOF2  ------>ZmHOX2a(1) -------->ALFIN1          ----------->GT1     --------->MYB46(3) --------->WOX13(1)     <---------YAB1   aagtgggaaatttattatcatgaccagtaagtaaaaagaaaataaataacaactgttctttgattaccaatctcctcttctctcctaattttgatgagaa  4940500                                                                      --------->ZAT14                                                                      <---------ZAT14                                                           <-------TEIL         --------->CCA1(2)                                <---------ARR14(2)                ---------    ---------->DOF2    ----------->GT1                    --------->ARR14(2)                ---------   XXXXXXXXXXXXXXXXXXX>MIR157D          ---------->DOF2  <---------GLK1(2)        <------ZmHOX2a(1) XXXXXXXXXXXXXXXXXXXX>MIR157A-C       <---------YAB1  <-----------RAV1(2)       --------->MYB59   attaacaaaagatagagagagagagaagtcaaaactggttatgaaagaaatttgaatcaggttcttgaacattgaactgaattaggaacacataccttca  4940600                                                                     --------------->AGL15                                                                     <---------------AGL15                                                                    ----------------->AGL1        ----------->GT1   --------->YAB1                      <---------ARR14(3)    --------->DAG2        --------->TOE2(3)                   <---------ARR11(3)   ---------->DOF2      <---------ARR11(3)                    <---------ARR14(2) ====================================================================================MADS_MADS --------------->AGL15  --------->ARR11(3)                    --------->ARR14(3) <---------------AGL15 <---------CCA1(2)                      --------->ARR14(2)                   -- >TOE1(3)              <---------GLK1(1)---------->DOF2       --------->ARR11(3)                  <-- >TOE2(3)         <----------DOF2<---------YAB1   --------->GLK1(1)<---------ZAT18                ---   caactaaaagtagaaaattactttgatatcttaatatgcttccaaagttcagaactctattgaagatattgcccttaagagagacagagagaagattaga  4940700                                                --------->CCA1(2)                                               --------->ARR14(2)                                               <---------ARR11(3)                                               --------->ARR11(3)               <---------YAB1                  --------->ARR11(1)    <---------TOE1(3)                          <---------GLK1(2)    <---------TOE2(3)                          <---------ARR14(2) ------->CCA1(2)                             ----------->ARR10 -------ARR11(3)       <----------DOF2 <----------ID1                         <---------ARR11(3) ------>ARR11(3) ---------->DOF2      <------ZmHOX2a(1)             ----------->HVH21   --------->MYB52(1)   gatattagggttttgtaatgaaagactttgaaggaagagaggagacaaagatttgcatttgtgtttggatgtgaaggcaatgtcttaaactaagagagta  4940800                                                                <-----------GT1                                 ----------->GT1              <-----------GT1                       --------->ANAC58               <-----------GT1                       --------->ANAC46           <---------RVE1(1)             ---------->DOF2   ----------->GT1    <---------CCA1(1)      ---------->DOF2  --------->ANAC58          <---------ARR11(3)                               *TSS    <---------ZAT6   ---------->DOF2             --------->ARR11(3)                   ----------->HVH21   ttagtagtgaaagcctaaagcctaaaagcaagagagagaaaaaaaaaactagatattttcaatttttcactctctcccttccctcccagtgacaaataga  4940900                                                                                       --------->AHL20(2)                                                                                      --------->YAB1                                                                                      --------->AHL20(2)                                                                                      <---------AHL20(2)                                                                                   --------->YAB1                                                                                   <--------HAHB4              <---------ICU4                                                      <---------YAB1             --------->ICU4                                                     --------->YAB1          <---------AHL20(2)                          <---------AHL20(2)     ------>MYB83          --------->AHL20(2)               <---------MYB46(3)                ------>MYB46(1)         --------->AHL20(2)          <---------AHL20(2)                    <---------MYB46(2)    ------->GAMYB                    --------->AHL20(2)                    <---------MYB59 --------->MYB52(1)                <-----------TBP    --------->AHL20(2)<-----------GT1<---------AHL20(2) ----------->RAV1(1)  <---------MYB52(1)<------------CBF     ----------->GT1 --------->MYB52(1)   aaacaacagcatttaattatgtcagttttgttagtgtatttatattggttacacaaataaatatggtttctatttaacctaactataattaaaatgcccc  4941000                                                                      <---------ANAC46                                                                  <----------DOF2                                                            <---------MYB46(3)                                                            --------->ATHB12                                                         <---------ANAC58                                                         <---------ANAC46     <-----------HVH21                                                  --------->ARR11(3)  <---------ANAC58                                                  <-----------HVH21   <---------ANAC58             <------ZmHOX2a(2)                ---------->DOF2 <---------WOX13(1)            <---------ARR11(3)               --------->AHL20(2)  <---------ANAC58            --------->ARR11(3)      ---------->DOF2      <---------ANAC58--------->ZAT18        -----     ---------->DOF2        ----------->GT1  <---------AHL20(2)  <---------ANAC58             <------   taaaaaaaaaagaagatcagagaattagaggggagaaacaaagaaaattaaaggtcatggggtgattgctttgcttgcactatcagacatcaaaatttac  4941100                                                                              <---------AHL20(2)                                 <---------MYB46(3)                           --------->AHL20(1)                                <---------ANAC46                       --------->YAB1                              <---------MYB46(3)                      <---------YAB1                       >>>>>>>GRF7                                    --------->ICU4                      <-----------RAV1(2)                           --------->YAB1                    <-----------HVH21 <------NtERF2        --------->YAB1 --------->AHL20(2)              <------ZmHOX2a(1) --------->ALFIN1         --------->ANAC58 <---------AHL20(2) ---->ANAC46 --------->ZAT18 --------->ALFIN1            --------->ANAC58--------->AHL20(2)    <----- -----GT1    <---------ZAT14 <---------AtMYB61  ----------->GT1---------->DOF2--------->AHL20(2)-----   acaagttttagagagaggactgtgtcagggagtggtgggcagagagtaagcagtgaaacaagcataaaagtcataataaataaaataacttaaaacattc  4941200     --------->ICU4     <---------YAB1   --------->YAB1   <---------ICU4  <---------ATHB12         ---------->DOF2                       --------->MYB52(2) ------->TEIL   ------->TEIL          --------->DAG2          <-------GAMYB --TEIL      --------->ANAC46----------->GT1      <---------ANAC46                        <---------- ---->YAB1 <---------DOF5.7(2)      ---------->DOF2          ----------->GT1--------->ETT(2)   atgaatcatgagtaaacgaagctaattgcaaaagaaaaaaaaggtatgtgttctgtatatttggggttatttgttttgttgacagaagtatttttctgta  4941300                                              ----------->GT1    <---------YAB1                        <---------ARR11(3) <---------AHL20(2)                       --------->ARR11(3) --------->AHL20(2)                   ---------->DOF2     --------->ANAC46 <---------AHL20(1)            <---------MYB46(3)        --------->SPL7 ----------->GT1 -GT1      ---------->DOF2  <----------DOF2--------->CCA1(2) <---------ANAC46                    <---   tattttatttttgcaaagaagataaacttactttggttcacaaagatatagataattcatacgtcgtctataacttgtaaaactttggactctcgaggtt  4941400  Previous    Next  AGI:  At1g14440.1    Description:  ATHB31 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 31); transcription factor. similar to ATHB21/ZFHD4 (ZINC FINGER HOMEODOMAIN 4), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G02540.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46921.1); contains InterPro domain Homeobox domain, ZF-HD class (InterPro:IPR006455); contains InterPro domain ZF-HD homeobox protein Cys/His-rich dimerisation region (InterPro:IPR006456); contains InterPro domain Homeodomain-related; (InterPro:IPR012287) Range:  from: 4938819    to: 4940898    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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