AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved TF binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
<---------MYB59 <---------HSFC1(2) <---------HSFB2a(1) --------->HSFB2a(1) --------->HSFC1(2) <---------ARR14(2) <-----------ARR10 ------->TEIL --------->ARR14(2) <---------ANAC58 <---------ARR11(1) <---------ANAC58 <---------ARR14(1) <---------ANAC55(1) <---------CCA1(2) <---------ANAC55(2) <-------TEIL <---------TOE2(3) --------->ARR14(1) --------->At4g35610 <---------MYB52(2) ---------->DOF2 <---------GLK1(2) --------->YAB1 <-----------GT1 --------->ANAC55(2) --------->ARR11(1) --------->ATHB12 -------->HSFB2a(2) <---------ANAC46 --------->ARR14(2) <---------ATHB12 ---------HSFB2a(2) <---------TOE2(3) --------------->AtSPL8 ------>ZmHOX2a(1) <---------YAB1 ---->WOX13(1)--------->MYB52(1)<---------TOE2(3) <---------ARR14(2) --------->ANAC46
atctagaaattactactaacgatttacgtatgctaaagttgctaactttgtactagattcgaatcttcctaacaagtctacgacctatgattagcttaga	4928300
--------->YAB1 --------->ANAC58 ------>ZmHOX2a(2) --------->ANAC46 ----- --------->TOE1(2)<------ZmHOX2a(2) --------->ANAC58 <------ ------->TEIL --------->ARR11(3) <---------ALFIN1 ----------->GT1 <----- <---------ANAC58 <---------ARR11(3) ----------->RAV1(1) ---------->DOF2 ------- <---------ANAC58 --------->At4g35610 ---------->DOF2 <---------ATHB12 --------->MYB52(1)
agaaacatataaggcttgaacctagaaacagcttaagatcgcatcaattcaccaaaatagccacacacaaatgataagatgaaagtaaaatcaacggatc	4928400
------>ZmHOX2a(2) --------->GLK1(1) <---------ARR14(2) --------->ARR11(3) <------NtERF2 <---------AGP1 <---------ANAC46 <---------ARR11(3) <---------LBD16 --------->AGP1 ------>ZmHOX2a(2) --------->ARR14(2) <------ZmHOX2a(2) --------->LBD16 <---------ARR11(3) --------->YAB1 <---------ANAC58 --------->ARR11(3) --------->ZAT14 <---------ANAC46 ---------->DOF2 ->ZmHOX2a(2) ------>ZmHOX2a(2)<---------LBD16 <---------TOE2(3) ---ARR14(2) <------ZmHOX2a(2)<---------ANAC58 <---------TOE1(3) -ZmHOX2a(2) <---------GLK1(1)<---------At5g28300 <---------MYB46(3)--------->LBD16 -->ARR14(2) --------->GLK1(1)--------->SPL7 <------ZmHOX2a(2)--------->ICU4
cagtaaacaaacatagaagaacagagatcggatgaaaatggtaccgtggaaacagatctcgttgttgaggtaaagatcgcggagagaagaggtcgtcaaa	4928500
<---------MYB52(1) --------->LBD16 <---------ATERF1(2) --------->ATERF1(2) <---------LBD16 --------->DEAR3(1) -------->ZAP1 --------->MYB46(3) --------->ARR14(2) --------->DEAR3(2) <---------ARR14(2) <---------WRKY18(1) <---------GLK1(2) --------->WRKY45 <------NtERF2 ----------->HVH21 <---------DEAR3(1) --------->WRKY12 <---------DEAR4(1) --------->SPL7 --------->WRKY38(1) --------->RAP2.6(3) <---------SPL7 <---------DEAR3(1) <---------ORA47(1)<---------At5g28300 --------->At4g35610 <-----------HVH21 <-----------GT1 -- <---------At4g35610 ---------->DOF2 <-----------RAV1(2)<---------ARR11(3) --- --------->YAB1 --------->ALFIN1 --------->YAB1 <------ZmHOX2a(2)--------->GLK1(2) ------
caaacatatgtgttcagcggtgttgaccgccggtaatcagagaaagttttccgatcgattcaggtcggcgattctcaatatcaccgtgcgatgagagaaa	4928600
<---------ANAC58 <---------ANAC58 <---------HSFC1(2) --------->HSFC1(2) --------->ARR11(3) --------->HSFC1(1) <---------AHL20(2) <---------HSFC1(1) ---------->DOF2 <---------ICU4 <---------HSFB2a(2) *TSS ---- --------->ATHB51 ------>ZmHOX2a(2) <---------ARR14(2) <--------ATHB1 <------ZmHOX2a(2) ==========================HOX2a_HOX2a <---- --------->AHL20(2) <---------ARR11(3) <---------ARR11(3) --------->ARR14(2) --------->GT1 --------->AHL20(2) --------->ARR11(3) <---------CCA1(2) -------->GT1 <---------ATHB12 <---------YAB1 --------->HSFB2a(2)----------->HVH21 <---- --->CCA1(2) <---------ATHB51 ------>ZmHOX2a(2) --------->YAB1 ------>ZmHOX2a(1) -----
tgggtaaaaaaaatcaataatttgggaagagatcgtataagtgatgaatgaatgatcttctagaagcttggctcctctctgacatatctgtaaagttgga	4928700
------>ZmHOX2a(1) ---------->ID1 --------->MYB52(2) <---------MYB46(3) <---------MYB52(1) <------MYB83 --------------->AGL15 <---------MYB46(3) <---------------AGL15 <--------P <---------MYB59 <-----------------AGL1 --------->ATHB12 <---------LBD16 --------->LBD16 <----------DOF2 --------->MYB55(2) ----------------->AG --------->LBD16 <----------DOF2 <---------MYB46(3)--------->ANAC46 --------->WOX13(1) ----->ARR14(1) --------->ALFIN1 --------->MYB52(1) <---------ZAT18 <---------LBD16 -----GLK1(2) <---------AtMYB61 -------->P <-----------GT1 <----------DOF2 -----ARR14(2) ----------->HVH21 <------MYB46(1)--------->LBD16 ------------>CBF <---------LBD16 ---- ---->ARR14(2) --------->ETT(2)<---------AtMYB61 --------->AHL20(2) <---------ALFIN1 <-------
ttcgctttgccctttggacgaccgagcgagtggttggtttgttcctaaccggaattaaaccgtttagggcaatctacactttaaccgggagattagtgtt	4928800
----------->GT1 <---------ANAC58 ----------->HVH21 <---------ANAC46 <---------At4g35610 <---------REM1(1) --------->At4g35610 <---------TOE2(3) --------->ARR14(2) --------->TOE2(3) <---------AHL20(2) --------->ANAC55(2)<---------ARR11(3) <----------DOF2 --------->AHL20(1) <---------ANAC55(2)--------->ARR11(3) <---------ZAT18 <---------ANAC58 ----------->HVH21 <---------ARR14(2) --------------->AtSPL8 <---------AHL20(1) ----->MYB52(2) <---------ANAC46 <---------CCA1(2) <---------------AtSPL8 <---------ARR11(3) --ZAT6 --------->YAB1 <----------DOF2 <-----------RAV1(2) <---------DAG2 <---------ZAT6
agttaacatacaacgatgacatgtaatcttttttatgtaaatcttcagatgacaaattagagtacttttcttaatgtagcgtaaactatatatttctaat	4928900
--------->LBD16 --------->MYB52(1) -------->P <---------MYB52(2) --------->ZAT6 <---------ANAC46 <-----------GT1 --------->MYB52(1) --------->ANAC46 <---------ZAT14 <-----------GT1
aaaccaatataaaccattgtaccactaaccggactaaaatccagacccaaaccacaagagtagagtagagtgatgtttttgttactagagagaaatgttt	4929000
---------->DOF2 =================bZIP_DOF --------->O2 <---------O2 <---------STY1(2) --------->TGA1a --------->STY1(2) <---------ANAC58 --------->ANAC46 <---------YAB1 <---------ANAC58 --------->ANAC58 --------->YAB1 <---------ANAC46 --------->ANAC58 <------ZmHOX2a(2)
ttgtggtatgtcttgtttctccaatctctctagacaaaccaattcatcttcaagcctcgtctcaaagcctaggcatttggatcatactagctcgtactca	4929100
<---------ANAC58 --------->ANAC58 --------->ANAC46 -------->P <---------ANAC58 --------->CCA1(2) <---------TOE2(3)------->GAMYB <---------ANAC46 --------->ARR14(2) <------ZmHOX2a(2) --------->MYB46(3) <-----------RAV1(1) ----------->ARR10 --------->ARR11(3) <-------TEIL --------->ANAC58 <----------DOF2 <---------TOE2(3) <---------ARR11(3) --------->CCA1(2) --------->CCA1(2)
gacttcaaattgagatttgctcttaaatcaaaaacaactaagatcagactgatgttttgagatacaaccgcttaccacgaaatgatatgtggcttttgaa	4929200

AGI:	At1g14400.1
Description:	UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin-protein ligase. Identical to Ubiquitin-conjugating enzyme E2-17 kDa 1 (UBC1) [Arabidopsis Thaliana] (GB:P25865); similar to ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT2G02760.1); similar to ubiquitin carrier-like protein [Solanum tuberosum] (GB:ABC01903.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608); contains InterPro domain Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135)
Range:	from: 4927006	to: 4928685	Orientation: Reverse
Links:	TAIR MIPS

AGI:	At1g14410.1
Description:	ATWHY1/PTAC1 (A. THALIANA WHIRLY 1); DNA binding / telomeric DNA binding. similar to ATWHY3/PTAC11 (A. THALIANA WHIRLY 3) [Arabidopsis thaliana] (TAIR:AT2G02740.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO41045.1); contains InterPro domain Plant transcription factor (InterPro:IPR013742); contains InterPro domain ssDNA-binding transcriptional regulator; (InterPro:IPR009044)
Range:	from: 4929118	to: 4930899	Orientation: Reverse
Links:	TAIR MIPS

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