Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             <---------MYB59                                                                           ------>ZmHOX2a(2)                                                                         <---------ARR14(2)                                                                         --------->ARR14(2)                                                                         <---------AGP1                                                                         <---------ARR11(3)                                                                         <-----------ARR10                                                                         --------->ARR11(3)                                                                        <------ZmHOX2a(1)                                                                      <---------TOE1(3)                                                                      <---------TOE2(3)                                                                   <---------AHL20(2)                                                                ------->TEIL                                                             <---------ANAC55(1)                                                             <---------ANAC58                                                             <---------ANAC58                     ---                                                           <-----------GT1<------ZmHOX2a(2)       <--                                           <---------CCA1(1) <---------ANAC46              <---------                            ----------->GT1<---------RVE1(1) <---------ANAC55(2)        <---------YAB1                       ---------->DOF2    --------->ARR11(3) --------->ANAC55(2)     <---------AHL20(2) ----->ZAT6         <------ZmHOX2a(2)     <---------ARR11(3)<---------TOE2(3)   <---------AHL20(2)<--   ctctaaattgtggaaattttagatcaaaagtagataaatagtcagatatttcatgtggattttacgtattttaaggatctaattcattttatgcttttaa  4923900                                                                   --------->ANAC58                                                                   --------->ANAC58                                                            --------->YAB1                      <---- ------>AHL20(2)                                           <---------ATHB12                    ------ -------AHL20(1)        --------->At5g28300               --------->ANAC58                    <------ -DOF2     <----------DOF2---------->DOF2                 --------->ANAC58     --------->AHL20(2) -------AHL20(2)       ----------->GT1                   --------->WOX13(1)    <---------AHL20(2)<---   aaaatttcattcactttcttcgaagcagtaaaacagtctgtcaatgtgaaacttatgaacaatcaacataagaaacaaaaattaaacaaaatttgtattt  4924000                <-----------ARR10                --------->ARR11(3)                <---------ARR11(3)                                                               ----            <---------At4g35610                                                                  ----            <---------ZAT2  --------->ANAC46                                                     <--- -----AHL20(2)  <---------ARR14(2)                                         <-----------GT1       <--- --->ICU4   --------->ZAT2<---------ALFIN1                             --------->AHL20(2)        ---- -----TBP   --------->At4g35610          <---------ANAC58              <---------AHL20(2) --------->LBD16 ---------CBF   --------->ARR14(2)       <---------ANAC58   <------------CBF     ------------>CBF<---   attgtcttcttctcagcagaacttctctccacttaattttgtttcttgctctgtcccaaaaacattgtttcatttttttatctcccaatttccctagaaa  4924100                               <---------------AtSPL8                       --------->HSFB2a(2)         <------ZmHOX2a(2)     --------------->AtSPL8 --------->At4g35610   <---------HSFB2a(2) ----->GLK1(2)    --------->ARR11(3) ----->ARR11(3)   <---------ARR11(3)                                                              --- --------ARR10    --------->GLK1(2)                                                          -------- ------ARR11(3)  --------->CCA1(1)                    --------->ZAT6                      --------->YAB1 ----->ARR14(2)  --------->RVE1(1)              <---------AHL20(2)                       --------->REM1(1) ------ARR14(2)--------->AHL20(2)               --------->AHL20(2)        --------->ZAT6------------>CBF   atctgcttccgatctaaaaaaatctctagaatttatgtacaaaacaccatttttttagactactaaacaaatactaacactaatctcggctacaataaca  4924200                             <---------ARR11(3)                             --------->ARR11(3)                     ------------>CBF                 --------->ANAC58                 --------->ANAC46                                                              <-----                 --------->ANAC58                                                     --------->ANAC58  --------->ARR11(3)----------->RAV1(1)                                               --------->ANAC58  <---------ARR11(3)--------->RAP2.6(2)                      ------>ZmHOX2a(1)        --------->ANAC46 ------->DOF2 ------>ZmHOX2a(1)     <----------DOF2          --------->LBD16        ---------->DOF2 ->MYB52(1)  --------->TOE2(3)  <----------DOF2       --------->ICU4            ------>ZmHOX2a(1)   gaaagaccttctgttccttaagccacaataacatctttctttctaatttctctgtaattcttcctgagagaatgcatagttcctctaaaagccaggcctt  4924300                           <---------At4g35610               <---------ANAC55(2)    <---------GLK1(1)      <---------DAG2<----------DOF2                          ----------->GT1        --------->GLK1(1)      <----------DOF2      --------->At4g35610     <---------At4g35610          --------->YAB1    <-- -----DOF2      <----------DOF2                    --------->At4g35610  <---------ARR11(3)---------->DOF2   ttctctcacttttcttctctttctttttcttctgccatcagtctcagaatcacagctaatatcaagtgaatcaagaactctattagaaatccaaaagcat  4924400            ------>MYB83            -------->P            ------>MYB46(1)          <---------MYB111(1)          --------->MYB46(3)          <---------MYB111(2)          --------->AtMYB61          <---------ALFIN1          <---------MYB55(2)                                                   ------>ZmHOX2a(1)         --------->MYB46(3)                                                --------->ARR14(2)      --------->MYB46(3)                                                   <---------ARR14(2)     ---    <---------ARR14(2)                        --------->At4g35610          <---------ARR11(3)  <-----    <---------ARR11(3)         --------->At4g35610   ------>MYB83      --------->YAB1          ------    --------->ARR14(2)         ----------->RAV1(2)   ------>MYB46(1)<----------DOF2        <--------- ---------GT1        <------ZmHOX2a(2)        <---------At4g35610------>ZmHOX2a(1)        --------->YAB1   ttacaatatccaccaactcttcgatcatggagcaactggaccaatttctgctacctcccttcttctccttctttcaaaatcctctgtttcaatggtcatg  4924500                                               --------->GLK1(2)                                              --------->ARR11(3)                                              <---------ARR14(2)                                              <---------GLK1(2)                <---------LBD16               <---------ARR11(3)                --------->LBD16              <---------HSFC1(2)               <---------ANAC46              --------->HSFC1(2)               <---------O2                  --------->HSFB2a(1)            ----------->HVH21            --------->LBD16           <-----------TGA1             --------->LBD16           <-----------HVH21            --------->ANAC46          ------->GAMYB                 <---------HSFB2a(2)         --------->MYB46(3)            <---------LBD16         <------------AtMYB77          --------->LBD16       <-----------GT1   --------->ARR14(2)  <---------HSFB2a(1)       --------->MYB52(1)<---------ARR14(2) ----------->ARR10       <---------At5g28300 ---->TEIL--------->ANAC46        <---------At4g35610--------->ANAC58 ----ANAC55(2) --------->O2       --------->At4g35610--------->ANAC46                             --- --->ANAC55(2)<---------LBD16  ---------->DOF2--------->ARR14(2)   <-----------GT1            ------- --HVH21<---------At5g28300   <---------MYB52(1)     --------->ANAC58                      --------->TOE2(3)   taactgaattaaccgtcacggggaacagaaccgttaagctccccggaagattctcaagcgactcactattcactgttcttacaaaactctcaaacttaaa  4924600                                               <------ZmHOX2a(2)                                              --------->ARR11(3)                                              <---------ARR11(3)                                        <---------REM1(2)                                       <-----------HVH21        <---------CCA1(2)                                 <---------At4g35610     --------->ARR11(3)                                 =====================HOX2a_HOX2a ------>ARR11(3)                 --------->At4g35610     <---------ARR11(3)     ------->TEIL --->DOF2                        ------>ZmHOX2a(1) <-----------RAV1(2)         <---------GLK1(2)   gacattgtctctggtctctcttggcatctctggtcctctcccttcacagatcatcaggttatcttcatctcttcaatctctgaatctcagttctaatttc  4924700                       ------>ZmHOX2a(2)                      <------ZmHOX2a(2)                     --------->ARR11(3)                     --------->ARR14(3)                     <---------ARR11(3)               ---------->DOF2              ================HOX2a_HOX2a              ------>ZmHOX2a(1)              ===============HOX2a_HOX2a         --------->KAN4(2)        --------->KAN4(1)        <---------KAN4(1)        <----------TaMYB80        --------->HSFC1(2)                                                                        <--        <---------HSFB2a(1)                                                                       ---        --------->HSFB2a(1)          <---------ARR14(2)                                       <------        <---------HSFC1(2)          <---------GLK1(2)                                 ------>ZmHOX2a(1)       ---------->TaMYB80    <-------GAMYB                               <---------LBD16  ------>ZmHOX2a(2)       <---------KAN4(2)    <---------MYB46(3)             --------->ZAT18      --------->ALFIN1 <---   --------->LBD16  <---------GLK1(1)--------->ARR14(2)    <---------ZAT18 ------->GAMYB<---------ARR11(3) <---------LBD16    --------->GLK1(1)--------->GLK1(2) >>>>>>>ZML2      --------->MYB52(1)===========   atctctgggaatattcctaaagagatctcgtcgttgaagaatctgagaagtcttgttctagcgaacaatttgtttaacggaagtgttcctgatctcagag  4924800  Previous    Next  AGI:  At1g14390.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G02780.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41051.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 4924272    to: 4926789    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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