Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <---------YAB1                            <----------DOF2                   --------->AHL20(2)                       <---------GLK1(1)                      --------->AHL20(1) ------->ZAT14         <----------DOF2       <---------ARR11(3) --------ZAT18        <---------ANAC58       --------->ARR11(3)  <---------AHL20(2)      <---------TOE2(3) ------>ANAC58        <---------ANAC58  <---------YAB1        <---------AHL20(1)    <---------AHL20(2) ------>ANAC58    <---------MYB52(1) <---------AHL20(2)      <---------AHL20(2)     --------->AHL20(2) ----->LBD16     <-------GAMYB      <---------AHL20(2)   <---------AHL20(2)        --------->AHL20(2) ----LBD16      <---------ANAC58  <---------YAB1         --------->AHL20(2) --------->HSFB2a(2) ->ARR14(2)     <---------ANAC58<---------AHL20(2)     <----------DOF2      <---------HSFB2a(2)     -   gcgcacttactcttccttccgttggctttcctttttatttttattagtatctttcttctttaaatattttatagagttctacaaatttaaaaaggttttc  4907900                 --------->AHL20(2)                 <---------AHL20(2)             --------->AHL20(2)             --------->AHL20(1)             <---------AHL20(2)            --------->ICU4            <---------ATHB51            --------->AHL20(2)            <---------AHL20(2)                <---------MYB46(3)       ----------->GT1             --------->ANAC58                                      <------MYB46(1)     ----------->GT1    <---------YAB1     --------->ALFIN1                              <------MYB83 -------->ALFIN1<---------AHL20(2) --------->ANAC58<----------DOF2 <-----------GT1      --------->MYB59   atgtggagagagaaataatttatattcagattgaatcaagaaaatgtgtggttcttttgttttctcatttttctctctagcattttgaatttggtaagac  4908000                <---------YAB1                                                                   <<<<               <---------GLK1(2)     --------->DAG2                                            <-----             --------->ICU4         ---------->DOF2              <----------DOF2           ==========             <---------YAB1  --------->YAB1       --------->AHL20(2)                       ------>ZmHOX2a(2)     <---------CCA1(2) <---------WOX13(1)         <---------AHL20(2) <-----------GT1      <---------GLK1(1)   aaaacccatgtcttcatgattcttgaatgactcataaaaaaagttttcttatataaatagccattttctttttgctgttttggagaaactcgatctctgt  4908100                                   --------->ALFIN1                         <---------AHL20(2)                         --------->AHL20(1)       --------->DAG2                         <---------AHL20(1)      ---------->DOF2                        --------->AHL20(2)    --------->YAB1     --------->AHL20(2) --------->YAB1      --------->AHL20(2) <<<<<WRKY18        <------ZmHOX2a(1)      --------->YAB1 ------HVH21     --------->At4g35610--------->ZAT14                            ----------->TGA1 ==========================HOX2a_HOX2a  ----------->GT1----------->GT1         ----------->HVH21<----   caaaaaaaaaaatcgaatcagaggaattatattggcagtggagaataaaaataaagcaggtaaaaaactcgagagttttcagtgacgaaaatgagttcct  4908200                   <------MYB46(1)                   <------MYB83                                                        --------->ALFIN1                  --------->MYB59                                                     <------ZmHOX2a(1)                  <---------TOE2(3)               *TSS --------->DAG2              <------ZmHOX2a(1)             --------->AHL20(2)      <----------DOF2  ---------->DOF2        ----------->HVH21             <---------AHL20(2)  <----------DOF2------>ZmHOX2a(1)        <---------ANAC46         ---------->ID1      <----------DOF2    --------->AtLEC2         <---------ANAC58 ------DOF2<----------DOF2<-----------GT1   <-----------GT1              <---------ANAC58         <--   tttcagagtttgtctttaattaggtttttttctttctttctttttttttcctgcaaaaaagttgaagaagtcattgtgtgtgataggaggagttggattt  4908300           ------->GAMYB        <---------DOF5.7(2)      ----------->GT1        --------->MYB52(1)   <---------AHL20(2)    --------->DAG2          <---------AHL20(2)                           --------->AHL20(2)  ---------->DOF2           --------->AHL20(2)      ---------->DOF2----------->GT1 -------------AGL15     >>>>>>>>>>GT-3b--------->AHL20(2) <------ZmHOX2a(1)     ---------->DOF2   ttaaaaaaggtaacggagcgtcgaagaaaaataaatagaaaataaacagagacagaaagaggacatatacagtaagaaaatataaagagagagacagtag  4908400                                                                         --------->ANAC46                                      ---------->DOF2          ------->GAMYB                                 >>>>>>>>>TBF1                --------->MYB46(3)                          --------->ARR14(1)                 --------->ANAC58                          --------->CCA1(2)                  --------->ANAC58                         --------->ARR11(1)                 ------->GAMYB--------->ANAC58        <---                         --------->TOE1(2)                 <---------MYB111(2)                   <---            ----------->GT1<-------TEIL                    <---------MYB55(2)                    <---           >>>>>>>>>TBF1 <---------ARR14(2)           <-----------GT1    --------->ANAC58       -----        >>>>>>>>>TBF1    --------->ARR14(2)        --------->YAB1   --------->GLK1(2)       --------- ---------->DOF2       ----------->ARR10     >>>>>>>>>TBF1 --------->MYB46(3) ---------->DOF2  <-----   taagaaagaagaagaagaaaaatggaagatacgaagaagaaaaagaagaagaatattaacaacaaccaagattccaagaaaaaagagcgtcatattgtta  4908500 <-----------HVH21 ------ANAC58 ------ANAC58 ------ANAC46 ---->MYB52(2)                  ------->TEIL -->GT1                      <---------YAB1                                        <----------DOF2 ------GT1   --------------->AtSPL8                                <---------WOX13(1)             <--   cttggtcacaagaggtctgtacatatatatgatgaaactctgtttttgttttgtattgctctgtttttgagtgattctgaaatgggtttatggagttgca  4908600                                                        --------->ICU4                                                        <---------YAB1                                                      --------->YAB1                                                   <----------DOF2                                 --------->ANAC46--------->At4g35610                               <---------AtLEC2<---------ZAT18   ----------->GT1         <---------------AGL15 <---------At4g35610                      ---------->DOF2  --------->ARR11(3)      --------->ZAT6   --------->DAG2    <---------ICU4             --------->YAB1  <---------ARR11(3)    <-----------GT1   ---------->DOF2<---------ICU4       <---------AHL20(2)<---- ----ZmHOX2a(1) <----------ID1<---------REM1(2)--------->ZAT18    <-----------GT1      <---------YAB1   ggaagatgttatactaagagaacaaataactctacatggaactgaaaagtgagctttcattattcatttcactcttctgtttatttgctatgaaaagtct  4908700                        <---------ANAC58                                      --------->CCA1(2)                        <---------ANAC58                                     <---------ARR14(2)                        <---------ANAC46                               <-------GAMYB        <--------                     <-----------GT1                                  <---------MYB46(3)    <--------                  <---------AHL20(2)                                  --------->MYB111(2)<---------MYB52(1)                 <---------AHL20(2)                                  <--------P         <-------GAMYB                 --------->AHL20(2)                       --------->TOE2(3)  --------->ARR11(1)             <---------AHL20(2)                        <---------GLK1(2)   ----------->ARR10<-------- ------DOF2 --------->AHL20(2)                 ---------->DOF2---------->DOF2--------->ARR11(3)   ttttttttcttatataaaatttttttccttggaaagtttttgttttttgaaaagatggattcttaaaagaggttgttgagatatggtttccgttgtgtgt  4908800  Previous    Next  AGI:  At1g14350.1    Description:  FLP (FOUR LIPS); DNA binding / transcription factor. similar to MYB88 (myb domain protein 88), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G02820.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO48427.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 4908250    to: 4911163    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version