Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <---------HSFB2a(2)         <------MYB83                                                <---------------------WRI1         <------MYB46(1)               <------MYB46(1)             <---------ETT(2)         --------- -------->LBD16                        <------MYB83           <---------ZAT2    --------->HSFB2a(2) ------->ANAC46                    <---------ARR14(2)         <---------At4g35610     ----------->RAV1(1) ------->ANAC58                    <---------GLK1(2)          --------->At4g35610  <------ZmHOX2a(1) ------->ANAC58                    --------->ARR14(2)         --------->ZAT2   ------>ZmHOX2a(2)    < -------LBD16                 --------->MYB52(1)         --------->YAB1      --------->ARR11(3)    --   tccgcaacgataggtgcctatggaaactgaatcaacagatttggttttgatatcatatatcatcagctgtctactatttgatctaggacaacacaaaagc  4887000                                <---------ANAC58                                <---------ANAC55(2)                                <---------ANAC58                                --------->ANAC55(2)                     <---------ARR11(3)                                <---------ANAC46                        --------->ARR11(3)                           -------->HAHB4                             <---------TOE1(2)                           --------->ATHB12                <---------AHL20(2)                           <---------ICU4                 --------->ARR11(3)                           <--------ATHB1                 <---------ARR11(3)                          --------->ICU4                  <---------AHL20(1)      <-----------------AGL1 <---------WOX13(1)           <---------AHL20(2) ->DOF2                   <---------ATHB12     <-----------GT1        --------->LBD16 ---------YAB1            <---------YAB1  <---------YAB1  --------->AHL20(2) ------->KAN4(2)    <---------ZAT6   --------->ZAT6       --------->AHL20(1)                ---------   ttattcttctccaaaatggctactggtaatgattgcgtaacactacgattcactatcgaatatatttgttcccaggtcttgttctctgaattgaacgacc  4887100                                                        <---------ANAC58                 ---------->DOF2                                            <---------MYB52(1)                        --------->LBD16                                          ----------->GT1                            <---------HSFB2a(2)                                       ------------>MYB.PH3(1)                       --------->HSFB2a(2)        <---------MYB46(3)       --------->ANAC58       <---------ANAC58             --------->ANAC46        <-----------RAV1(1)      --------->ANAC58       <---------ANAC46        --------->At4g35610    --------->ATHB12           ---------->DOF2         <------NtERF2        --------->ARR11(3)   <---------YAB1          --------->MYB46(3)        <---------DEAR3(1)     <---------ARR11(3) --------->YAB1           -------->P   --------->MYB52(1)        <---------TOE2(3)  <---------LBD16 >MYB46(3)               --------->MYB52(1)--------->At5g28300 --------->ICU4 ------>ZmHOX2a(2)  <---   atattatcatttgttggagaggtttactaaccgataagcacaaacggttattcaggctgcgtgtgataatgtttctatgatctgcttccgcaaaaggagc  4887200                                    --------->ZAT6                                    --------->ANAC58                                    --------->ANAC58                                  --------->MYB52(1)                                ------>ZmHOX2a(2)                               --------->CCA1(2)                               <------ZmHOX2a(2)                              --------->ARR11(3)                              --------->ARR14(2)                              <---------ARR14(2)                              --------->AGP1                               --------->DAG2                              <---------ARR11(3)               --------->LBD16                             <---------GLK1(1)        <----------DOF2     ---------->DOF2                             --------->GLK1(1) <---------AHL20(2)        <---------ATHB12                         --------->ALFIN1      --------->AHL20(2)    --------->MYB46(3)             -  <---------ZAT6       --------->ALFIN1      --------->TOE2(3)--------->LBD16               <-------TEIL -------DOF2           <---------ANAC46      <----------DOF2 <---------LBD16     <------ZmHOX2a(2)  -   tttagagataacttgaaaagtttcggtgtggagatctaacgctaaaactttaatttctttcttcccggttaaccaataaagcgatccatctacatacaga  4887300               <------ZmHOX2a(1)        ----------->HVH21      --------->ANAC46      --------->LBD16                                            <------MYB83     <------NtERF2                                               <------MYB46(1)    <---------LBD16                                             <---------AtMYB61    ------>NtERF2                            <---------WOX13(1)<--------P                        <--- -------->ANAC58                           <------ZmHOX2a(1) --------->ALFIN1                    <--- -------->ANAC58  --------->ICU4  <------ZmHOX2a(1)          <-----------RAV1(1)                 <---   gcatgcccccgagacgaggaagtattaatccgataaggagaagaaggattgatatacctccaagtgttggtgctaaaatcaaaaacttcacatgtagtag  4887400                                                                                      --------->ANAC55(2)                                         <---------MYB52(1)                           <---------ANAC58        ----------------->AGL1      ------>MYB46(1)                                   <---------O2      --------->ANAC46              ------>MYB83                                      <---------ANAC58    --------->HSFB2a(2)           <---------MYB59                                    <---------TOE1(3)    <---------HSFB2a(2)           --------->AtMYB61                                  <---------TOE2(3) ------ANAC58               --------->ANAC46      --------->ANAC46        <---------ARR14(2)      --- ------ANAC46               --------->ANAC55(2)--------->ARR14(2) <----------DOF2   <-----------GT1 ------ANAC58        ----------->GT1--------->MYB52(1)  <---------ATHB12  --------->ARR14(2)   ------   cgttttctaggccaagttcggaagagttatacataaccaaaccggtttgtatatgccactgattttgtctttgccaaatccaaatttaacgtgactaaaa  4887500                     <-----------RAV1(1)                     <---------MYB46(3)                     ====================RAV                  --------->ARR14(2)                                       ------------>CBF                  <---------ARR14(2)                              <------NtERF2            --------->ANAC58                                    <---------ANAC46              <------MYB83       --------->At4g35610                                      <---------ANAC58              <------MYB46(1)       <---------At4g35610                                   --------->ALFIN1                --------     <---------RAP2.3(3)     ----------->RAV1(2)    ------>NtERF2--------->LBD16             -------- ------>ARR11(3)  <---------GLK1(2)         --------->HSFC1(2)  <---------ANAC58        <---------TOE1(3) --->YAB1   --------->ANAC58-------->P      <---------HSFC1(2) <---------LBD16          <---------TOE2(3)   taacttggctgctcaagacagatttgttgcaacctggaaacagggaaacgtcgatgccatcgagtggcgggattataaacaatgttgtttaaggtttggt  4887600                                                                                <---------MYB52(1)                                                  <---------YAB1              --------->ANAC58                                          <------MYB83                        --------->ANAC55(1)                                          ----------->GT1                     <---------ANAC55(2)                                          <------MYB46(1)                     --------->ANAC46          --------->ANAC58               --------->MYB59        <---------YAB1--------->ANAC58  <---- ---------->DOF2                     --------->DAG2           <---------At4g35610 --------->MYB52(2)- ->MYB59  --------->ANAC58  <------------CBF   --------->ICU4<---------YAB1 <---------ALFIN1  <------ ->MYB46(2)        <-----------HVH21---------->DOF2 --------->ARR11(3)   --------->MYB46(3)--------->ALFIN1   aatcaaagaggcaaacaagaccgtcacaactattgtggaaaagttggtaaatatgatatcgttctgatgatatcaacaacacgttagttttaagtggagg  4887700                                                                               ----------->RAV1(2)                                                                               <---------ZAT2                                                                               --------->ZAT2                                                                           <-----------HVH21                                                                           ------>NtERF2                                                                           --------->LBD16                                                                          --------->ANAC46                                                                          --------->ANAC58                                                                          --------->ANAC58                                                                         <---------LBD16                                                                     <----------DOF2                                                                   <------ZmHOX2a(2)                                                                  <---------AGP1         <------ZmHOX2a(2)                                                                  <---------ARR11(3)    --------->ARR14(2)                <---------bZIP60(2)                               --------->AGP1        <---------ARR14(2)       --------->At5g28300   ------>MYB83                         --------->ARR11(3)<---------At4g35610      ----------->GT1        ------>MYB46(1)                     <---------CCA1(2)  --------->At4g35610    <---------At4g35610     --------->MYB52(1)               --------->CCA1(2) <---------At4g35610    --------->At4g35610 --------->REM1(1)                   --------->ARR11(3) --------->At4g35610 --ZmHOX2a(1) --------->ATHB12 <---------SPL7               <---------ARR11(3)------>NtERF2 -------->GLK1(2)     ----------->RAV1(1)          --------->AtMYB61------>ZmHOX2a(2)  --------->At4g35610 ---ANAC46   <---------YAB1--------->AtMYB61      <XXXXXXXXXXXXXXXXXXXXMIR776<-----------RAV1(2)   agaatcagcagtaacatgatggggcaacaccaacgtactgggtacttcagacaccaatacaagatttagatctttcccgccagctgagcagatcaactgt  4887800                                                                                                  ---                                                                                                -----                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                           --------->KAN4(1)                                                                                           --------->GLK1(1)                                             --------->At4g35610          --------->ANAC46 <---------KAN4(1)                  <-------TEIL               <---------At4g35610         <---------LBD16   <---------GLK1(1)                 --------->CCA1(2)          --------->ANAC58 --------->At4g35610          ---------->TaMYB80                 --------->GLK1(2)          --------->ANAC58 --------->ZAT2   --------->GLK1(1)------                 --------->ARR14(1)   <---------ANAC58       <---------ZAT2--------->LBD16<---------KAN4(2)              <---------TOE2(3)       <---------ANAC58       <---------ZAT14  <---------GLK1(1)------   --------->HSFB2a(2)         >>>>>>>>>>>>>>>>>LFY          <---------At4g35610         <---------GLK1(2)   <---------HSFB2a(2)      <---------At4g35610              --------->ZAT14 --------->ARR14(2)------ ----------->RAV1(2)        --------->At4g35610        ------->TEIL    <-----------GT1   --------->YAB1   ttcgcctggaaatattgagattcgattgtcaacttccattgtttgcaagcagacttgaatctgagcagagatttcaccggaactctctcaagaatatcct  4887900  Previous    Next  AGI:  At1g14315.1    Description:  Identical to Putative F-box protein At1g14315 [Arabidopsis Thaliana] (GB:Q9M9T0;GB:Q1G3F3); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G09650.1); similar to predicted F-box and bHLH containing protein [Overexpression vector pFC12860OE] (GB:ABK41847.1); contains InterPro domain F-box associated type 1 (InterPro:IPR006527); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043) Range:  from: 4886763    to: 4887434    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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