Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->TOE2(3)                                                                                           --------->TOE2(2)                                                                                           --------->TOE1(3)                                                                                           --------->TOE1(2)                                                                                     --------->YAB1    --------->YAB1                                                               ------>ZmHOX2a(2)   <---------YAB1                                                               <------ZmHOX2a(2) ---AHL20(1)                                                                   <---------ARR11(3) ---AHL20(2)                           --------->ARR11(3)                <---------ZAT6    ---------- -->AHL20(1)                           <---------ARR11(3)    ----------->ARR10 --------->ARR11(3)  -- -->AHL20(2)                          --------->HSFB2a(1)    --------->MYB59   <---------AGP1     <-- ->AHL20(2)       <---------YAB1      <---------HSFB2a(1)  <---------MYB52(1)  --------->AGP1     ---   tttgtataatagcttcacttattctagtttcagagtcggaagatttcaacaaaacatatcagttagatactaatagagatagatctatgttaaccttgga  4857600                                                                                                    <                                                                                               <-----                 <------MYB83                                                                 <------            <------MYB83                                                         ----------->HVH21 <-            <------MYB46(1)    --------->ANAC58                               <---------ARR14(2)   <- ----------->WRI1<------MYB46(1)                                              --------->ARR14(2)<---- ------->GLK1(1)<---------AtMYB61                                          --------->AHL20(2) <------ -------ARR11(3)<---------MYB46(3)                                      ----------->GT1  --------->ALFIN1 ------>ARR11(3)--------->MYB59--------->ANAC58         ------>NtERF2   --------->YAB1   <-----------RAV1(1)   gatatcgaagagattggtttggtcgcaaaacgcaggccaagtgccattgttgaactgaggccagagtccatggatgataaaatccgacgctgtgttgcct  4857700 -------GAMYB ----DAG2                                                                    --------->At5g28300 ---ANAC58       ------>ZmHOX2a(1)                                          ----------->GT1 --------ANAC58  <---------DAG2                                      --------->AHL20(2) --------ANAC58  <----------DOF2              --------->At4g35610    <---------AHL20(2)         <---- ------DOF2  <---------ARR11(3)          ------>ZmHOX2a(1)          --------->YAB1   <---------ANAC46 ---ANAC58----------->RAV1(1)          ----------->RAV1(2)     ----------->GT1  ----------->ARR10   ttcgttggagggcaacatcctttttggctatcgcatattgctcctggccactgcatcatataacgaggtataaaaatacggtaagatgtgtgtatatata  4857800                                     >>>>>>>>>>WRKY6                                     >>>>>>>>>>WRKY11                                    --------->WRKY38(1)                              --------->ANAC55(2)                              <---------ANAC55(2)                                              ------                              <---------ANAC46                                           --------->ANAC58                              <---------ANAC58                                           --------->ANAC58                              <---------ANAC58    --------->ARR11(3)                --------->ANAC58                <---------MYB46(3)  --------->WRKY12                                ----------->HVH21      ------->TEIL       <---------ICU4-------->ZAP1                                --------->ANAC58 ---TEIL     <-----------RAV1(1)    ----------->HVH21              <---------YAB1   --------->ANAC46   catatatgtatgtaagtgttgttggaaacattacgtagttgacccagtagaagaaattgaagtctggttctgtttgagacgaagacacgacaaggctctg  4857900                                                                                      ------------>CBF                                                                                    <-----------GT1                                                                                <---------AHL20(2)                                                                               --------->AHL20(2)                           ------>ZmHOX2a(1)                                   <---------AHL20(2)                     <---------ICU4                          <---------YAB1    <---------AHL20(1)                    --------->ICU4                         *TSS                --------->AHL20(1)                  --------->YAB1                          <---------YAB1<---------ANAC58        -----    <-----------GT1 <---------YAB1                   <---------ANAC58   <---------ANAC58  <---------ATHB12 ----->GT1       --------->ICU4                      <---------ANAC58   --------------------->WRI1   taaaattaacaagcttacgatgatgattcctctcatgtgttttgctctctgtgtttcttgattattttttgtttccttgaatttatttcccaatctatat  4858000                      <---------ATHB12                     --------->ANAC58                     <---------AHL20(2)         <---------------AtSPL3                        <---------AHL20(1)        <---------YAB1         --------------->AtSPL3                        --------->AHL20(1)     --------->AHL20(2)         --------------->AtSPL8                        <---------ARR11(3)     <---------AHL20(2)         --------->DAG2  <------------CBF      <---------AHL20(2)             --------->AHL20(1)         <---------------AtSPL8              ----------->TBP--------->TOE2(3) <---------AHL20(1)       ---------->DOF2------------>CBF      --------->AHL20(1)             <---------AHL20(2)  --------->DAG2     --------->ANAC58       <---------ARR11(3)             --------->AHL20(2) ---------->DOF2    <xxxxxxxxxxxxxxxxsmallRNA(i)---------->DOF2           --------->AHL20(2) ------>GT1       ------------>CBF        ------->TEIL --------->ARR11(3) <---------AHL20(2)   gtaaaaagggaaaggtacctcacaatcaattgtttccaaaaatgaatatataaagaatattttcttaatttgtttattaatttattattctcaacttggt  4858100                                 -------->HAHB4                                 <---------ICU4                                 --------->ATHB12                                <---------ATHB12                            ------------------>ATHB9                           --------->TOE1(3)                           --------->TOE2(3)<-----------TGA1                     --------->ANAC46      <---------ANAC46                     --------->ANAC58     ------>NtERF2               --------->AHL20(2)--------->YAB1          <----------DOF2             <---------AHL20(2) --------->ICU4   <---------AHL20(2)              <----------DOF2             --------->AHL20(2) <---------YAB1   --------->AHL20(2)            ------->TEIL <---------ALFIN1    --------->ANAC58  <---------At4g35610        --------->TOE2(3)   tctccacttgtctaaaaaaatataggcaaccttaatgattacgctgcgtcattaattctctttgtgaaacttaatcggatggacttttgtaacagataaa  4858200                                                        ---------->DOF2                                         ------>ZmHOX2a(2)                                       --------->ARR14(2)                                       <---------ARR14(2)     ----------->RAV1(1)    <---------ANAC58     <---------ZAT18  --------->ANAC58          <---------ANAC46  <---------ICU4                            <---------YAB1  --------->ANAC58          <---------ANAC58  ---------->DOF2                           <---------ATHB51  --------->AtLEC2  <<<<<<<<<<<<<<<<<LFY<------ZmHOX2a(2)          <-----------GT1   <---------YAB1   tgccatgcaacaatgctcttggtaacattggcttgaactgggatccgataatgccctcaaaaggagattaaacgattctactacattccgattattgttt  4858300                                                                --------->GLK1(2)                                                               <---------GLK1(2)                                                              ------>MYB46(1)                                                              ------>MYB83                                                            <---------MYB59                                   --------->AHL20(2)   ----------->HVH21                                   <---------AHL20(2)  <---------WOX13(1)                                  --------->AHL20(2)----------->HVH21                                 <---------YAB1   <---------ANAC58           --------->AHL20(2) <---------YAB1      <---------ANAC46   --------->ZAT6    <----------DOF2              <---------ANAC58 --------->YAB1 --------->YAB1--------->ICU4    <---------At5g28300----------->GT1       <---------MYB52(1)   ctataatactaaactaaataatactttagcacattattaaaaaactattgtaccgtgactgaccaaattctgttaaacttatgcattagccattagggct  4858400                                             <---------TOE1(2)                                             <---------TOE2(3)                                          --------->ANAC46                                 <------MYB46(1)                                        --------->CCA1(2)                    --------->ARR14(2)                                       --------->ARR14(2)                    <---------ARR14(2)            --------->TOE2(2)          <---------ARR14(2)            --------->ARR11(3)    <------MYB83            --------->TOE1(2)   <-----------GT1      --------->TOE2(3)      <---------GLK1(2)      <---------YAB1      <------ZmHOX2a(1)  <---------TOE2(2)       <---------ARR11(3)------->TEIL   gaagttttatgaaacgtatgatgcattaggaattttaccaatatacgaaggtttatcttatttgaattttagattttagaatccccatgaatttggtttg  4858500  Previous    Next  AGI:  At1g14210.1    Description:  ribonuclease T2 family protein. similar to ribonuclease T2 family protein [Arabidopsis thaliana] (TAIR:AT1G14220.1); similar to ribonuclease NW [Nicotiana glutinosa] (GB:BAC77613.1); contains InterPro domain Ribonuclease T2; (InterPro:IPR001568) Range:  from: 4856773    to: 4857959    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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