Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          --------->At4g35610                                                             --------->LBD16                                                            <---------HSFB2a(2)                                                          <------ZmHOX2a(2)                                                  ---------->DOF2       --------->ZAT2                                                <-----------RAV1(2)     <---------ZAT2               --------->ARR14(2)             ----------->RAV1(1)       <---------At4g35610         -    --------->ANAC58                        --------->ZAT18 --------->HSFB2a(2)                  ----    --------->ANAC46               <---------ARR14(2)    <---------ARR14(2)                    <-----    --------->ANAC58      ---------->DOF2   <---------ZAT18------>ZmHOX2a(2)                  ------- ---------DOF2 <---------ARR14(2)  --------->ARR14(2)    --------->ARR14(2)           <----------DOF2 >ZmHOX2a(1) --------->ANAC46     --------->WOX13(1)    <---------ARR14(1) <-------TEIL      --------   cctttctcgcaatctccgatacgactccgaaagcgccaatccgatgcgcaccagaagcggatcccgaaccatggagctgcattctagtctttgtgagatc  4839500                                                                <------MYB83                                                                <---------DEAR3(2)                                                                <------MYB46(1)                                                               --------->MYB55(2)                                                               --------->MYB52(2)                                                               <---------DREB2C(2)                                                               <---------MYB46(3)                                                               --------->MYB46(2)                                                               <---------DEAR3(1)                                                               <---------DEAR4(1)                                                              --------->SPL7                                                              <---------ORA47(1)                                                              <---------MYB55(1)                                                     ------>ZmHOX2a(1)           <------------AtMYB77                    ------>ZmHOX2a(2)                      --------->ANAC46         --------->MYB52(1)                       <------ZmHOX2a(2)                      <---------At4g35610      --------->ANAC55(2)                        --------->ARR11(3)                      --------->At4g35610      --------->ANAC55(1)                        --------->ARR14(3)                     <---------ALFIN1      --------->ANAC58                           <---------ARR14(3)                    <------NtERF2      <---------ANAC55(2)                        <---------ARR11(3)  <----------DOF2  <---------ATERF1(1)      --------->ANAC58                           --------->ARR14(2) <---------ANAC58  ------>NtERF2      --------->ANAC46                           <---------ARR14(2) <---------ANAC58 <---------ARR14(2)   --------->ARR14(2)                           <------ZmHOX2a(1)  --------->ABI4(2) --------->ARR14(2)   <---------ARR14(2)                        --------->YAB1   <--------P            --------->At4g35610 -------->YAB1          ------->GAMYB  --------->ANAC58 <---------ARR14(2)          <---------ZAT2 ----->WOX13(1)         --------->AtMYB61   <---------ZAT2<---------LBD16           <---------At4g35610 -ZmHOX2a(2)           <---------MYB55(2)  --------->ANAC58  <---------MYB52(1)     --------->ZAT2 -->ARR11(3)           --------->MYB46(3)  --------->ANAC58  <-----------HVH21     <---------ATERF1(1) ->At4g35610------->GAMYB              --------->ANAC58 --------->ARR14(2)  <-----------HVH21      <-   aatcggaaacgtaactgactctgcaaccatcgcagagagtgaagcaagcaggatcctggttccggtcggtgcttctctggtcactcggctccgctccatt  4839600                                                                      ------->GAMYB                                                                     --------->ANAC46                                                                   <---------DOF5.7(2)                                                                  <---------WRKY45     --------->ARR14(2)                                           <---------WRKY12     <---------ARR14(2)       --------->WOX13(1)                  <---------WRKY38(1)             ---   --------->LBD16   --------->ZAT6                         <---------ANAC46          --------->At4g35610 <---------LBD16 <---------MYB52(2)                         <---------ANAC58          <---------At4g35610 ----------GT1 --------->ZAT6 *TSS                          <---------ANAC58      <-----------HVH21   ttcaccggatttgattaccactaacacaatgtccatcacagagaacacaacttgattctatttcgtagtcaacgacatcgtttcggtcatcagagtgtat  4839700                                                                                          <---------TGA1a                                                                                          --------->O2                                                                                          <---------bZIP60(2)                                                                                          <---------O2                                                                                          --------->TGA1a                                                                                          <---------ANAC46                                                                                          ===========                                                                                         <------NtERF2                                                                                        ------>NtERF2                                                                                        <---------RAP2.6(3)                                                                                       ------->GAMYB                                                                                       =============MYC_MYB                                                                                       --------->DEAR3(1)                                                                                      --------->DEAR3(2)                                                                                     --------->At4g35610                                                                                     <---------At4g35610             --------->TOE2(3)                                                      ------->GAMYB        <---------DEAR3(2)                                                          ================MYC_MYB    <---------O2   <------------CBF                                                --------->MYB46(3)    --------->bZIP60(1)      ---------->DOF2                                     --------->MYB52(1)    <---------bZIP60(1)   <----------DOF2                                    <---------ZAT6    --------->O2 <---------AHL20(2)      --------->PCF2                 <----------DOF2----------->HVH21 -------->HVH21 --------->YAB1           <---------PCF2                 ============================bZIP_DOF   ttgacgacgtcgtttccataatattgggctttaaagtcttatgggcccatgttcacaaattctaaaatacaaaactttagagataacagccgacgtggca  4839800                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                   --                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                               <-----                                                                                               ------                                                                                              -------                                                    ------>ZmHOX2a(1)                       ---------                                                  *TSS                                      ---------                                                <---------ARR14(2)                          <--------                                                --------->ARR14(2)                         --------->MYB46(3)                                               <---------CCA1(2)                         --------->REM1(1)             --------->REM1(2)  <---------At4g35610--------->TOE2(3)                   ------>ZmHOX2a(1)    ---------->DOF2 <---------YAB1   ------>ZmHOX2a(1)                            <---------At4g35610 ==============bZIP_DOF         --------->At4g35610--------->TOE1(3)              --------->At4g35610   aaacatgaaagaccgagtagacattatagttttgagctcctcccatttcatatccttaagaaaaacaaaaacaaaaatcaaatgagctccttcaccacca  4839900       --------->LBD16       ------>NtERF2       <---------ATERF1(1)      --------->ANAC58      --------->ANAC46      --------->ANAC58   --------->ANAC46    --------->HSFB2a(2) <---------ALFIN1     <---------LBD16 --------->ZAT6<---------ARR11(1) ----->MYB46(1)------->TEIL ----->MYB83   <-----------ARR10                     --------->MYB46(3) ------->P------>NtERF2<---------HSFB2a(2)          ------>MYB83 --------->RAV1(1)   ------>ZmHOX2a(1)              -------->P ------>AtMYB61--------->ARR14(2)                   ------>MYB46(1) <-----------RAV1(1) ------>MYB46(3)--------->GLK1(1)           --------->REM1(2)   <---------ANAC46               ------ ----->MYB46(3)<---------ARR14(2)         --------->LBD16     <-----------HVH21            --------->ANAC58 ----ALFIN1<------NtERF2--------->LBD16  <---------ANAC46     --------->LBD16    <---------ARR14(2) --->AtMYB61  <---------ARR14(1)      --------->DEAR3(1)<---------MYB52(1)       --------->ARR14(2) -->MYB46(3)  <---------CCA1(2)    --------->YAB1  --------->MYB55(1)        --------->LBD16   <----- >ANAC46 <---------ALFIN1         <---------YAB1   --------->MYB52(1)      <---------LBD16 --------->ANAC58 >AtMYB61--------->DEAR3(1)    --------->AHL20(2) --------->AtMYB61<---------TOE1(2)       --------->ANAC46 -ALFIN1--------->MYB46(3)     <---------AHL20(2)--------->MYB46(3)<---------TOE2(2)   ----------->RAV1(1)   ccaacactccgccaccgtatctcctccggaaaatttatcatcgccgtgtaaaccaaccgttctccgtcgtatgttgcaccggagaaccccaacaagacat  4840000                                                         <-----------TGA1                                                        <---------bZIP60(1)                                                        <---------ANAC55(2)                                                        --------->bZIP60(1)                                                        --------->bZIP60(2)                                                        --------->ANAC55(2)                                                        --------->ANAC46                                                        --------->REM1(1)                                                        --------->ANAC58                                                       <-----------STF1                                                    --------->ABI4(2)                                                   --------->ALFIN1                                                  <------NtERF2                                                 <---------DEAR4(2)               --------->TOE2(3)                 <---------DEAR3(2)         <------NtERF2                           <---------MYB46(3)        --------->LBD16                          <---------ORA47(2)       --------->DEAR3(1)                       <---------DEAR3(1)      <------NtERF2                             <---------DREB2C(2)      <---------LBD16                          <---------ABI4(1)     --------->LBD16                         <---------DEAR3(1)     --------->MYB52(1)    --------->YAB1   --------->At4g35610     ------>NtERF2<---------WRKY18(1)       <---------At4g35610                       <----------ARF1    ------->GAMYB >>>>>>>>>WRKY18          ----------------------->TaNAC69(2)         ----------->HVH21    --------->ANAC46  <---------ZAT14     <---------WRKY12--------->TGA2(2)           <----------ID1   <---------MYB55(2) --------->ZAT18     <---------WRKY38(1)<---------At4g35610  --------->ALFIN1   --------->MYB46(3) --------->ZAT14    --------->WRKY18(1) --------->At4g35610--------->CCA1(2) --->ARR11(3)  --------->TOE1(3)        <-----------HVH21<-----------HVH21  <------ZmHOX2a(1)      -- ----ARR11(3)--------->GLK1(2)       <---------At5g28300--------->ANAC58 <-----------RAV1(2) <-------   cttcacccgccggagaaccttgacttcactaataacattcacggtcatcggcggtgctacgtcatcagcattagcacaggagaaatgggggacaaggtca  4840100                                                   <---------ANAC46                                                   <------NtERF2                                                   ----------->GT1                                                  ------>NtERF2                                                 <---------ANAC46                                                --------->ATERF1(1)                                                <------NtERF2                                               ------>NtERF2                                               <---------RRTF1(1)                                               <---------RAP2.6(1)                                               <---------DEAR4(2)                                               <---------ATERF1(1)                                               <---------RAP2.3(1)                                               <---------ERF1                                               <---------ORA47(2)                                               <---------DEAR3(2)                                              <---------RAP2.3(2)                                              <---------RAP2.3(3)                                              <---------RRTF1(3)                                              <---------RRTF1(2)                                              --------->ATERF1(2)                                              <---------ATERF1(2)                                              --------->ALFIN1                                              <---------DEAR3(1)                                              --------->DEAR3(1)                                             ------>NtERF2                                             <---------ABI4(1)                                             <------NtERF2                                             --------->ATERF1(1)                                            <---------RAP2.3(1)                                            <---------DEAR4(2)                                            <---------RRTF1(1)                                            <---------ATERF1(1)                                           <---------RAP2.6(2)                                           <---------RAP2.3(2)                        <------NtERF2      <---------RRTF1(2)                       --------->LBD16     <---------DEAR3(1)                       ------>NtERF2      --------->ATERF1(1)                      <---------ANAC46   --------->ALFIN1                <------ZmHOX2a(1)                <---------AHL20(2)      --------->ARR14(2)          ----------->HVH21             <---------AHL20(1)  <---------At4g35610              <---------At4g35610   --------->DAG2     <---------LBD16   <---------ARR14(2)        --------->At4g35610              <-  ---------->DOF2    <---------LBD16   <------ZmHOX2a(1)        <---------DEAR3(1)            <------ ------->YAB1--------->AHL20(1)  --------->At4g35610           --------->RAP2.6(3)           -------- --ARR11(3)  --------->AHL20(2)  ----------->RAV1(2)          --------->MYB52(1)             <-------   ttcataaaggagaaatattttatgccgggactatcacctgaggatgcggcggcgcgtataaaacagacggctgaaggattaagagacatgagggagatgt  4840200                                                                         --------->ANAC58                                                                         --------->ANAC58                                                                         --------->ANAC46                                                                        ------>MYB83                                                                      --------->DEAR3(1)                                                                      --------->AtMYB61                   <---------ANAC55(2)                               --------->MYB46(3)                   --------->ANAC55(2)                           ------>ZmHOX2a(2)                   --------->ANAC58                             <---------GLK1(1)                <---------SPL7                                 <---------AGP1              --------------->AtSPL8                           --------->ARR11(3)         <---------ANAC46                                      <---------ARR14(2)         <---------ANAC58                                      <---------ARR11(3)         <---------bZIP60(2)                                   <-----------ARR10                    <         <---------ANAC58                                      --------->ARR14(2)           <------NtERF2       <-----------HVH21                                      <---------GLK1(2)            --------->LBD16     ------->MYC3  --------->ANAC58                           <------ZmHOX2a(1)           <---------ANAC46     <-------MYC3  ----------->GT1                          <---------TOE1(2)      <---------ARR11(3)  <---------ALFIN1<-------TEIL                             <-----------RAV1(2)--------->AtLEC2      < --------PCF5 <---------------AtSPL3                       <---------LBD16------->GAMYB   --------->ETT(1) -----RAV1(1) <---------------AtSPL8                   <-----------HVH21------>MYB46(1)  <---------LBD16 ->ARR11(3)   --------------->AtSPL3            <---------ANAC58--------->GLK1(1)  --------->ARR11(3) --ARR11(3)--------->ALFIN1                     <---------ANAC58<------ZmHOX2a(2)------->TEIL     <--   tggaccacatgtcgtggaggtacgttatattctacataagattgaaacaggcttatctgtctcaggatctcaccaacgccatgaacatcttgccggagag  4840300            <---------ANAC58            <---------ANAC58            <---------ANAC46       --------->YAB1       --------->ATHB12       <---------ICU4 <------NtERF2                                 <---------AHL20(2)      <---------YAB1 ------>NtERF2                              <---------AHL20(2)      --------->ICU4 --------->RAP2.6(2)                        --------->AHL20(2)   <------NtERF2    <---------DEAR3(1)                          <---------YAB1  --------->LBD16   --------->ATERF1(2)                  --------->ANAC55(2)  ------------------>ATHB9                               --------->ANAC46       --------->AHL20(2) --------->LBD16    <---------ATERF1(2)              --------->CCA1(2)<---------TOE2(3) ---------LBD16<-------TEIL    <---------ANAC58    <---------ANAC46 --------->AHL20(2) ------NtERF2 <-----------HVH21<---------ANAC58   --------->MYB59  <---------YAB1            -------- -------DEAR3(1)<-----------RAV1(2)         <---------YAB1--------->TOE2(3)     <---------AHL20(2)---   tcgccggaatgattacgttcaggcggcaaacgagcttgtcgaaaacatgagtgaggtatacgttatataattaatgaacaaattaaaaacagaattagta  4840400  Previous    Next  AGI:  At1g14140.1    Description:  mitochondrial substrate carrier family protein. similar to ATUCP2 (UNCOUPLING PROTEIN 2), oxidative phosphorylation uncoupler [Arabidopsis thaliana] (TAIR:AT5G58970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48352.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial brown fat uncoupling protein; (InterPro:IPR002030); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067) Range:  from: 4837924    to: 4839630    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g14150.1    Description:  oxygen evolving enhancer 3 (PsbQ) family protein. similar to PSBQ/PSBQ-2/PSII-Q (PHOTOSYSTEM II SUBUNIT Q-2), calcium ion binding [Arabidopsis thaliana] (TAIR:AT4G05180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48361.1); contains InterPro domain Photosystem II oxygen evolving complex protein PsbQ; (InterPro:IPR008797) Range:  from: 4839850    to: 4840748    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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