Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        <---------ANAC46                                                --------->ARR14(2)            ------->GAMYB                                                --------->ARR11(3)           <---------ALFIN1    ----                                                <---------ARR14(3) <---------At4g35610          -----                                                --------->ARR14(3) --------->ZAT2              ------                                                <-----------ARR10  ----------->RAV1(2)         <-----                                                <---------ARR11(3) --------->At4g35610         <-----                                                <---------ARR14(2) <---------ZAT2         --------->ANAC46 --TEIL                                   <-----------GT1        <-----------RAV1(2)      --------->ANAC58 >KAN4(1)                              ----------->GT1<---------ANAC58    --------->REM1(1)  -------- -HSFB2a(1)                          --------->ICU4   <---------ANAC58--------->At4g35610 --------->ANAC58   atccatacacttcttcaacatcgaagtgacttccatacaattagtaacaatatcttccttgttcttctcagctgcttcaacacactcttcccaagcaaca  4817600            --------->MYB46(3)    <---------ICU4  <---------ARR14(2)  <-----------ARR10  ------->TEIL                                                                  ------>ZmHOX2a(1)  --------->ARR14(2)                                                           <---------ALFIN1  --------->GLK1(2)                                                          ------>ZmHOX2a(1)  <---------ARR11(1)   --------->YAB1                                 --------->ARR14(2) <---------ARR14(1) <----------DOF2                                   <---------ARR14(2) ----->MYB52(1) <---------ALFIN1          <---------ALFIN1         <---------ANAC58 -->GAMYB   <---------MYB111(2)         <---------ALFIN1       --------->At4g35610 --->MYB46(3)--------->AtMYB61   --------->YAB1                ----------->RAV1(2) ----MYB52(2)------->GAMYB     --------->ANAC58           <-----------GT1   <---------ALFIN1 ----MYB55(2)<---------ALFIN1  --------->ANAC46       ------>ZmHOX2a(1)   ------>ZmHOX2a(1)        <- --->RAV1(1)<---------MYB55(2) --------->ANAC58   ------>ZmHOX2a(1)<---------ANAC58------>ZmHOX2a(1)   aacgaatctttgcaaccacctcctttcataaacaagcaaaacccacactctccttcctcttcaccatctgcgtctcctcctcctccttcttctggttttt  4817700                --------->HSFB2a(2)                <---------HSFB2a(2)                                                <---------GLK1(1)              ----------->RAV1(2)                                                  --------->At4g35610           <---------HSFC1(2)                                           <---------LBD16           --------->HSFC1(2)                                         ----------->HVH21           --------->HSFB2a(1)                                --------->At4g35610  --------->GLK1(1)           <---------HSFB2a(1)                                --------->ZAT2       <---------At4g35610          --------->GLK1(2)                             <---------At4g35610    --------->ANAC58          --------->ARR14(2)                            --------->At4g35610    --------->ANAC58          <---------ARR14(2)                          <-----------RAV1(2)   <---------ARR14(2)         <---------GLK1(2)                       --------->ARR14(2)   --------->ETT(2)   <---------ARR14(2)                           --------->GLK1(1)    --------->ATERF1(1)--------->LBD16   --------->ARR14(2)                         --------->LBD16 <---------At4g35610 ------->TEIL   <---------GLK1(2)                     <---------GLK1(1)    <---------ZAT2--------->ARR14(2) ----------------AGL1                   ------->TEIL ------>ZmHOX2a(1)<---------WRKY38(1)   catccgattcggaatcttctgggtctctccaaacagttgatgaatctccgagttcctcagatggagctggagtcgacggagacgcatctccgagtttctc  4817800                      ---------->ID1                      <---------MYB52(1)             --------->HSFC1(2)             <---------HSFC1(2)                                                                   <--             --------->HSFB2a(1)              ---------->DOF2    ------>ZmHOX2a(2)                ===             <---------HSFB2a(1)         --------->ETT(1)      --------->ARR14(2)                 ===           <------ZmHOX2a(1)             ----------->GT1       <---------AGP1                     ===    <---------At4g35610          --------->CCA1(2)   <-----------------AGL3----------->GT1        ===    --------->At4g35610       <---------TOE2(3)--------->DAG2  <---------ARR14(2)              <-----   agatttagctggaggagcttcttcgttgttttgagatttggggtcggaaaaagtctctgtttttggatctgtggatgatgtaattcccatttttctctca  4817900                                                                                                   --                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                -----                                                                                               <-----                                                                                              ------>NtERF2                                                                                              <------                                                                                              -------                                                                                              -------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                    <---------HSFB2a(2)                                                    <---------DREB2C(1)                    --------->HSFB2a(2)                                                    <---------RAP2.3(1)                ------>ZmHOX2a(2)                                                          --------->ABI4(1)                ==============================HOX2a_HOX2a                                  ------>NtERF2                =================================HOX2a_HOX2a                               <---------ATERF1(1)                =======================HOX2a_HOX2a                                         --------->DREB2C(1)               ===============================HOX2a_HOX2a                                  --------->At4g35610               ========================HOX2a_HOX2a                                         <---------At4g35610               <------ZmHOX2a(2)                                                          --------->RAP2.3(3)              <---------AGP1                                                              --------->RAP2.3(2)              --------->ARR11(3)                                                          --------->ATERF1(2)              <---------ARR11(3)                                                         --------->RAP2.6(1)              <---------ARR14(2)                                                         --------->RAP2.3(1)              --------->ARR14(2)                                                         --------->ERF1             <---------CCA1(2)                                                           --------->DEAR4(2)             <---------ARR14(1)                ---------->DOF2                           --------->ATERF1(1)           ============================HOX2a_HOX2a                                       --------->DEAR3(2)           ------>ZmHOX2a(2)              <------ZmHOX2a(1)                              <---------RAP2.6(2)           ===================================HOX2a_HOX2a                                <------NtERF2          ====================================HOX2a_HOX2a                                --------->ORA47(2)          <------ZmHOX2a(2)              ----------->GT1                                <---------ATERF1(1)          =============================HOX2a_HOX2a                                      --------->ABI4(2) ----ZmHOX2a(1)==================================HOX2a_HOX2a               <---------GLK1(2)<------NtERF2 ======================HOX2a_HOX2a     <------ZmHOX2a(1)        <---------TOE2(3)       ------>NtERF2 ================HOX2a_HOX2a        <-----------RAV1(2)         <---------TOE1(3)      --------->ALFIN1 =================HOX2a_HOX2a    <---------ARR14(2)       <----------DOF2<---------TOE1(3)--------->DEAR3(1) =====================HOX2a_HOX2a--------->ARR14(2)<---------ARR11(3)    <---------TOE2(3)<---------ATERF1(2) ------RAV1(2)<-----------ARR10 <------ZmHOX2a(1)  --------->ARR11(3)<----------DOF2   <---------DEAR3(1)   ggagagagtgagatcggatcttatggaaattggaggattcaggaggagaaaaagatgtctctttttaagggttttaaggttctctctcggtgccgccgcc  4818000    <----------DOF2 ------->GLK1(2) -------ARR14(2) -------GLK1(2) ------>ARR14(2) ---->DEAR3(1) -NtERF2 ---ATERF1(1) -->LBD16 -->ABI4(1) ->RAP2.3(2) ->RAP2.6(2) ->RRTF1(3) ->RRTF1(2)                                                                       --------->KAN4(2) ->RAP2.3(3)                                                                     <----------TaMYB80 --ATERF1(2)                                                                     <---------GLK1(1) ->DEAR3(1)                                                                      --------->GLK1(1) --DEAR3(1)                                                                      --------->KAN4(1) ->ATERF1(2)                                                                     <---------KAN4(1) >ATERF1(1)                                                                     ---------->TaMYB80 >RRTF1(1)--------->ANAC46                                                      --------->ARR14(2)--- >RAP2.6(1)                        --------->HSFC1(2)                           <---------ARR11(3)--- >ORA47(2)--------->ANAC58     --------->YAB1     <-----------GT1               <---------ARR14(2)--- >ERF1<-----------GT1       --------->WOX13(1)<<<<<<<<<MYB98                  --------->LBD16   ----- >DEAR4(2)--------->ANAC58------------>CBF  <---------YAB1                  <---------LBD16     <---- >RAP2.3(1)      *TSS  --------->ICU4   <----------DOF2               <------------CBF      ---------   gattctctttacaagccagagagaaatgatcaatcgaaacgtctttatgttaaaacccctcaaaaacctttctattgaaccggatattctaaaccggacc  4818100   ------>MYB46(1)                                                            <---------ETT(2)   ------>MYB83                                                               <---------ZAT18 <---------MYB59                                                          ------>ZmHOX2a(2) --->MYB46(1)                                                            --------->At4g35610 ------>MYB52(1)                                 --------->YAB1         --------->ARR11(3) --->MYB83                                      <---------YAB1          <---------ARR11(3) ---->AtMYB61                       --------->MYB46(3)               <---------KAN4(2) -----MYB59            ----------->GT1---------->DOF2       ----------->RAV1(1)                ------ >LBD16     --------->TOE2(3)     <-----------GT1----------->GT1---------->DOF2  --------->ANAC46   aaaccgaacttaaacctttgttaaaccgtaagaatttaaccaaagtgaatatgataaaacaacaacaaaagaatgatctgtccacaagacgattcaagaa  4818200                                                                                              <------            --------->ARR11(3)         <---------AHL20(2)                                   <--------            <---------ARR11(3) ---------->ID1                                               ---------          <---------TOE2(3)   <-------GAMYB--------->ANAC46                           <---------YAB1          <---------TOE1(3)  <---------MYB46(3)                                    ------>MYB46(1)     ----------->GT1         <-----------RAV1(1)                                   ------>MYB83    --     <---------ZAT6 --------->TOE2(3)  --------->AHL20(2)                         ----------->RAV1(1) --->YAB1 <---------YAB1     --------->MYB52(2)       ------>ZmHOX2a(1)          --------->AtMYB61 --   taatgtattgttaagatttcaacatcaatgtttgttgctaattaaacacaagtctcctatttgctacaaatcgaatatagacaccaacatcattcgtttt  4818300                                          <---------YAB1                                          <---------TOE2(3)                                 --------->TOE2(3)                                <---------ICU4      ---------->DOF2           --------->ATHB12     <---------AHL20(2)         --------->YAB1  --------->YAB1                <--------HAHB4 -----TBP   ----------->GT1    --------->ICU4 -------AGL15                  <---------ATHB12                                                   <-- ------>AGL15              <------------------ATHB9               --------->TOE2(3)               <-- --------->GT1             <---------KAN4(2)           <----------DOF2                       <------- ------->YAB1----------->GT1   <---------YAB1 <-----------GT1 --------->GLK1(1)           xxxxxxxxxxx   atagtaataaaaggaagataaatatagggagtaatcattagattaatattacagtcgctttcagatttcgtcaaatttcacaggcagacaagtttctttg  4818400                                                   <---------AHL20(2)                                                   -------->ATHB1                                      --------->AHL20(2)                                    <------------CBF       <-----------ARR10                                   -------->HAHB4  <--------HAHB4                                   --------->ATHB12--------->AHL20(2)                                   <--------ATHB1  <---------ICU4                                   <---------ICU4 <---------ATHB12                                   --------->ATHB51--------->ATHB51                                  --------->AHL20(2)       --------->ARR14(2) -------ANAC58                    <---------AHL20(2)      <---------CCA1(2) -------ANAC58  ----------->GT1   <---------ATHB51<---------ATHB51 ---DOF2  --------->YAB1    --------->YAB1        --------->ICU4 --------->LBD16              <------ xxxxx>smallRNA(i)       <----------DOF2      ------------>CBF <---------LBD16     <----------DOF2---   acttggtcactataagagttgtaaactctttgataaataattgaatacagcaattatttcaaatctccggtgaagtttttctgggctctaagtatgaaga  4818500  Previous    Next  AGI:  At1g14060.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G02210.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61574.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80057.1); contains InterPro domain GCK (InterPro:IPR012891) Range:  from: 4817141    to: 4818017    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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