Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------ICU4             --------->ATHB12            --------->ICU4     <---------ANAC58     <---------ANAC55(1)     <---------ANAC55(2)     <---------ANAC58     <---------ANAC46     --------->ANAC55(2)    <-------TEIL                                                                                   --  <---------SPL7  <---------ANAC58                                     --------->At4g35610        <-- ---------------AtSPL3                                   <---------ARR11(3)                     ----- ---------------AtSPL8                                   --------->ARR11(3)                     ----- -------------->AtSPL3                                  --------->RVE1(1)              <---------MYB46(3) ---------TOE2(3) <---------ANAC58                ----------->GT1---------->DOF2 <<<<<<<<<<<<<<<<<LFY --->RAV1(1)<---------YAB1              <-----------GT1 --------->CCA1(1)   ------->TEIL <---------ANAC46   ttgaggtacgtgtcatgatttcgtttcagtttttgttttgttttacaacagcttgaaaatatctgaataaaggagatgaatataaacagtggtttgaatc  4802300                                                               --------->WRKY12                                                               ----------->HVH21                                                               --------->WRKY45                                                               --------->WRKY38(1)                                                              <---------MYB52(1)                                                              --------->DOF5.7(2)          --------->AHL20(2)                                 --------->At4g35610          --------->ICU4                                 --------->GLK1(2)      <---------ZAT18            <---------------AtSPL3  <---------ARR14(2)      --------->ZAT18            --------->DAG2     <------MYB46(1)      --------->ZAT14       --------->AHL20(2)      ----------->GT1      <---------ZAT14    --------->YAB1             <------MYB83<---------DOF5.7(2)      ----------->GT1 <---------YAB1        --------->At5g28300          <---------ANAC55(2)                 --------->DAG2 ------->ATHB12       ----------->GT1 <---------ANAC55(2)--------->ARR14(2)        --------->YAB1 -------YAB1      ----------->HVH21  <---------LBD16<---------ANAC46        --------->MYB46(3) ------>GT1<---------AHL20(2)   ---------->DOF2    --------->MYB46(2)  --------->YAB1 ---------->DOF2 ---->YAB1<---------ATHB12  --------->YAB1         --------->MYB59    ----------->HVH21--------->DAG2   gtgattagtgcaataaatagatgacagtaataaaaaaagtacgggagaacaattaggtgaatccgttgacgaatgacaacgactatcaaaaaggcaaaat  4802400                                                                                 --------->TOE2(3)                                                         <---------TOE1(2)     <---------YAB1                                                         <---------TOE2(2)  <---------YAB1                                             <----------DOF2              --------->YAB1                                          <---------ARR11(3)              <--------HAHB4                                          --------->ARR11(3)              <---------ICU4                                  <---------YAB1      --------->YAB1      -------->ATHB1                                 --------->KAN4(2)   <---------YAB1      <---------ATHB12         <----------DOF2        <---------KAN4(1)  <-----------GT1       --------->ICU4     <----------DOF2            --------->KAN4(1)  --------->YAB1      --------->WOX13(1)     <------   gtgtcatctttctttatatgtttttcaatgttgaatattcttgaaatctttatttatcatatgtttttctgatcaatcattatccttgaaacctattttt  4802500                                                                                        <---------AHL20(2)                                                                                        --------->AHL20(1)                                                                                        <---------AHL20(1)                                                                                        --------->AHL20(2)                                                                                   <------ZmHOX2a(1)                               --------->AHL20(2)                          --------------->AGL15                               <---------AHL20(2)                          <---------------AGL15                              --------->AHL20(2)                          <-----------------AG                        ----------->HVH21                                 <-----------------AGL1                   --------->GLK1(2)                                      <-----------------AGL2                  --------->YAB1                           <------ZmHOX2a(1)     --------->MYB59  ---                 <---------KAN4(1)         <---------AHL20(2)          <----------DOF2 --------->AHL20(2)                 --------->KAN4(1) --------->YAB1         ----------->GT1 <-----------------AGL3  --- ---AHL20(2)    <---------KAN4(2)<---------TOE2(3)       --------->MYB59  ----------------->AG    ---   ttttttttttggttatagaataatctttgacatttaatgatatatataatgaaacaagttaggaaaattgaagctttctgaattaggaaataaattgtgt  4802600                                                                 <-----------GT1                                                                --------->AHL20(2)                             <---------AHL20(2)            <---------MYB52(1)                            --------->AHL20(2)            <-------GAMYB                            ----------->TBP               --------->At5g28300                <-------                        ------------>CBF                 <---------MYB46(3)          <---------At5g28300             --------->GLK1(2)                       --------->WRKY12              ----------->HVH21 ------>ANAC46 <---------ANAC46                      ----------->HVH21         <---------CCA1(2)   <- ------>ANAC58 <---------ANAC58          >>>>>>>>>TBF1   ----------->GT1  <-----------GT1--------->DOF5.7(2) ------>ANAC58 <---------ANAC58       >>>>>>>>>TBF1<----------DOF2       <-----------GT1 <---------MYB52(1)   aagcaatagaatgagtttcttgggaaaacaataaatagaagaagaagaagacactttgacggttaattaacttattttcccatctctcaccgttaccacc  4802700                   --------->O2                   <---------ANAC55(2)                   <---------O2                   --------->ANAC55(2)                   <---------ANAC46                 ------------->DYT1                 *TSS                 <---------At4g35610                <---------MYB52(1)    --------->At4g35610              <---------ANAC58     <<<<<<<<<TBF1            <-----------GT1<------------------------ANAC81 --ALFIN1  <-----------GT1<---------AHL20(2)       ----------->GT1       <-------TEIL    ---------->DOF2 ---------DOF2<---------ANAC58 <-----------GT1   ---------->DOF2  ------>ZmHOX2a(1)----------->HVH21   tcttttttttttttttccgtctcgtgatttttttttcttcttctgaatttcgaaagaaaaaaaaactcctcgagattcaaaccatttgacacaaaggaga  4802800                                                                                                    -                                                                                                    <                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                <----                                                                                 --------->AHL20(2)<-                                                        ------>ZmHOX2a(2)        <---------AHL20(2)--                                                       <------ZmHOX2a(2)        <---------AHL20(2)<--                                                      --------->ARR14(2)        --------->AHL20(2)---                                                      <---------ARR11(3)  ----------->GT1       <----                                                      <---------ARR14(2)  --------->YAB1        <----                                             --------->At4g35610   <---------TOE1(3)           <-----                         <---------At4g35610 <---------At4g35610   <---------TOE2(3)          <------              <---------ANAC46          ----------->HVH21          --------->MYB59         ----------   gaagaagcatttcatttcgcgtttgtcatctaatttcaatttctgacatctcacaagatcggagaaatttaggttatagtaattttattctcatgaagcg  4802900                                                                                              -------                                                                                          --------->ARR14(2)                                                                                          <---------ARR14(2)                                                                                         <---------GLK1(1)                                                                                      <---------MYB52(1)                                                                                      <------NtERF2         <-----------HVH21                                                           ------>NtERF2        ------>ZmHOX2a(2)                                                            ------------>AtMYB77        ===============HOX2a_HOX2a                                                   --------->LBD16       ================HOX2a_HOX2a                                                  <---------ATERF1(2)       <------ZmHOX2a(2)                                                            --------->DREB2C(2)      <---------ARR14(2)                                                            --------->RAP2.3(3)  ------>NtERF2                                                                     --------->ATERF1(2) --------->DEAR3(1)                                                                 --------->DEAR3(1) -------->ATERF1(1)                                                                 <---------DEAR3(1) ------NtERF2                                                                       --------->RAP2.3(2) ------>DEAR3(1)                                                                   --------->ERF1 ----->RAP2.3(1)                                                                   <---------LBD16 ----->ATERF1(1)                                                                   --------->ATERF1(1) ---NtERF2 <---------DEAR3(1)                                                      --------->ORA47(2) -----DEAR4(2)                                                                     --------->RAP2.3(1) --------ATERF1(1)                                                                <---------ATERF1(1) ---->NtERF2                                                                      --------->LBD16<--- -------DEAR3(1)                                                                  ------>NtERF2  ---- -------->HVH21                                                       --------->At4g35610--------->At4g35610 -----RAP2.3(1)  --------->ALFIN1                                     <---------HSFC1(2) <---------At4g35610 -----ATERF1(1) ===========================HOX2a_HOX2a                --------->HSFC1(2)<---------MYB46(3) ----DEAR3(1)   <------ZmHOX2a(1)        ----------->GT1   <------NtERF2       <---------ATERF1(1) ---At4g35610<------NtERF2          ------>ZmHOX2a(2)     ------>NtERF2     --------->At4g35610  ---- >DOF2--------->ARR14(2)        --------->MYB59      <-----------RAV1(2)    <---------At4g35610  <---   gcgacgacgatcgtcggaggagggagatggaagttagatcggagagtaatattactcaggcgcgaagcgataagcttccgcttccgccggcagttccgaa  4803000                                                                             <---------MYB52(1)                                                                            <---------DEAR3(2)                                                                           --------->DEAR3(1)                                                                           --------->ATERF1(2)                                                                           <---------DEAR3(1)                                                                          --------->ATERF1(1)                                                                          <------NtERF2            --                                                                         <---------ATERF1(1)      ---                                                                         --------->ABI4(1)       <---                                                                         ------>NtERF2           ----                                                                        --------->DEAR3(1)       <---                                                                        --------->RAP2.3(3)      ----                                                                        --------->RAP2.3(2)      <---                                                                        <---------DEAR3(1)       ----                                                                        <---------ATERF1(2)      <---                                                                 <---------DAG2  <---------At4g35610                                                                 <----------DOF2 --------->At4g35610                                                               <---------At4g35610 <----------DOF2<-- <---------ANAC46                                        <------MYB83  --------->ERF1            <--- --------->O2                                            <------MYB46(1)--------->ATERF1(2)     <---- -->LBD16           <---------MYB52(1)                  --------->MYB59--------->DEAR4(2)       <---- ------HSFC1(2)    <-------GAMYB                  <---------ANAC58     --------->ORA47(2)      ------ ----->HSFC1(2)   <---------MYB46(3)              <---------ANAC46     --------->ATERF1(1)    ------- ----->HSFB2a(1)  --------->MYB52(2) <----------DOF2--------->ALFIN1   --------->RAP2.3(1)    ------- ------HSFB2a(1) <-------TEIL--------->At4g35610  <---------ANAC58    <---------RAP2.3(1)    <-------   gcctcgtgtacaagtatggttcgttagagtttgctccagcattttggtttggacgtgtttggttcagcttttcgccgccggtgagctttggcattcccgg  4803100 ---->ZmHOX2a(2) ------>GLK1(1) ------ARR11(3) ----->ARR11(3) ------ARR14(2) ----->ARR14(2) ------ARR14(3)              <---------GLK1(2) ----->ARR14(3)              <---------ARR14(2) ------ARR11(1)           <---------HSFB2a(2) ----ZmHOX2a(2)       --------->GLK1(1) --------ARR10    --------->YAB1                                      <---------ALFIN1 -----CCA1(2)    <---------ATHB12                                   ------>ZmHOX2a(1) -----ARR14(1)  ------>MYB46(1)                                 --------->AtMYB61 --->LBD16      ------>MYB83 --------->ARR14(2)                 <---------ALFIN1 -->ANAC46     --------->WOX13(1)                              --------->bZIP60(2) -->LBD16    --------->MYB46(3)     <---------At4g35610       ------>NtERF2     --------->LBD16 ----- --LBD16   <-----------GT1--------->HSFB2a(2)                <---------ALFIN1------>ZmHOX2a(1)  <----   atcttcactggtttaaccaatcagatttctagattctcagcccctgttgagccagttccattgccacctcctctacctcctccgagtcagttttctctct  4803200  Previous    Next  AGI:  At1g14020.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G03280.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G03280.2); similar to unknown [Populus trichocarpa] (GB:ABK94283.1); contains InterPro domain Protein of unknown function DUF246, plant (InterPro:IPR004348) Range:  from: 4802717    to: 4805372    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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