Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <----------DOF2                                                                      <---------DAG2            --------->ICU4         --------->ZAT14                --------->ARR14(2)            <----          --------->YAB1  <---------HSFB2a(2)                     <---------ARR14(2)     <-----------GT1 --------->DOF2           --------->HSFB2a(2)           <---------ANAC46              <---------AHL20(2) ----->TOE2(3)     <---------At4g35610                <---------MYB46(3)             --------->AHL20(2) ---->RAV1(1)-------->ATHB1 --------->ANAC46         <---------MYB52(1)           <---------GLK1(2)<-   atcaaagaacaagaattattcaactgttctacaaaactatactagtactattacagttgtttgtagcatatacttttccaaatagaattttatacgattt  4788200                                --------->ATHB12                               <---------YAB1                        --------->ANAC55(2)                                  <---------ANAC58                        ----------->GT1                                      <---------ANAC58          <---------AHL20(2) --------->CCA1(2)                 --------->AHL20(2)    <---------ARR11(3) -------GT1             <---------ANAC55(2)             <----------ID1  --------->ALFIN1            - ---------DOF2     <----------ID1          ------------------------>ANAC81  ------>NtERF2 ---------->DOF2   tcttttccatattttttgaaaatgacaagtgatatgatttgagaaaaaacaaaaaaaaaaaacaaatttatacagtgaggcctgcaagaccataaaacaa  4788300                                                                                    <---------AHL20(2)                                                                                 <--------ATHB1                        --------->ATHB12                                         --------->AHL20(2)                        <------------ATHB5                                       <---------ICU4                       <---------AHL20(2)                                        --------->ATHB51                       --------->AHL20(2)                                        <---------AHL20(2)              <---------TOE1(3)                                                 <---------ATHB51              <---------TOE2(3)                                                 --------->ICU4        <-------TEIL  <---------MYB52(1)           <---------AHL20(2)         --------->YAB1       <---------MYB52(1)               <-----------GT1                    --------->YAB1 --------->DOF2    ----------------->AGL3  ---------->ID1------->TEIL      ----------->GT1        ---   actaaagccgttcattaaggttccattaattgggcctatatttttctcgttatattatgagcctgttataggcccattagtaataatttatcgggttatg  4788400                                                ------->GAMYB                                             --------->MYB52(1)                                      --------->TOE2(3)                                    --------->AHL20(1)                                   <---------ANAC46                                    --------->ARR11(3)                    --------->ARR14(2)                                    <---------ARR11(3)     ----------->RAV1(2)           <---------ANAC58                  <---------TOE2(3)--------->RVE1(1)      ------->TEIL    <---------ARR14(2)     <---          <---------At4g35610--------->YAB1  <-----------GT1<---------LBD16              <---------ANAC58 -------->GT1    --------->MYB52(1)--------->CCA1(1)      -------->P <---------YAB1<------NtERF2 ----   aagtaaattttcagataattaagggtctcaagtataaatatcttaaataacagacccatctacctggaaatatgagtatttgggcagagaggggtgtttt  4788500                                                                              <----------DOF2                                                                             <---------ANAC58                                                                         ------>ZmHOX2a(2)                                   <----------DOF2                       =================HOX2a_HOX2a                                  <---------ANAC58               <---------GLK1(1)    ---------->DOF2                        <---------AHL20(2)                     <---------GLK1(2)      ===============                       <---------YAB1        <----------DOF2<---------HSFB2a(2)    ------>ZmHOX2a(1)                    <---------YAB1<---------ANAC58        ------>ZmHOX2a(1)  <---------ANAC58                   <------------------------ANAC81        ======================HOX2a_HOX2a          <-------TEIL<---------AHL20(2)    <---------DAG2=====================HOX2a_HOX2a   <-------      <---------------AtSPL8<---------AHL20(2)        <---------ALFIN1  ==================HOX2a_HOX2a ------ANAC46   <----------DOF2 <-----------GT1  <---------At4g35610    <------ZmHOX2a(2)   <-------- ------->GT1    <---------DAG2--------------------->WRI1*TSS--------->HSFB2a(2)   --------->TOE2(3)   cgtaaattcaagtacatactttatttttatttttttgctttcttcgccttttgctccctcctcgagaatttccgatcgtgctttcctcaaaagcatttct  4788600                          --------->GLK1(1)                          <---------GLK1(1)                         --------->ARR11(3)                    ------>NtERF2                    ----------->RAV1(1)                   <---------ETT(2)                   ----------->HVH21                   --------->ANAC46                   --------->TGA1a                   --------->ETT(2)                  --------->SPL7                 <---------ATERF1(1)              --------->ATERF1(1)                                     <---------CCA1(2)             ------>NtERF2<------ZmHOX2a(2)                      --------->GLK1(1)           <------NtERF2 --------->ARR14(2)                      <------ZmHOX2a(2)          <---------DEAR3(2)                                    --------->ARR14(2)          <---------ATERF1(1)                                   <---------AGP1        <------NtERF2    <---------ARR14(2)                     --------->AGP1       <-----------HVH21 <---------ARR11(3)                     <---------ARR14(2)      <---------DEAR3(1) <---------AGP1                         --------->ARR11(3)          <-------- ============================bZIP_DOF                --------->AHL20(2)                     --------- --ARR14(2)--------->ATERF1(1)                     ----------->GT1------>ZmHOX2a(2)      <---------ANAC46 -GLK1(1)<---------DEAR3(1)------>ZmHOX2a(2)   ----------->GT1  <---------ARR11(3)   <<<<<<<<<TBF1   gtttctcgtcgtcggagcccgacgacagatctctgaatcgctggagaaacagtaagtaaatctacagatctcgtttcttcgaacttcttcttcgtatact  4788700                                                  <-----------ARR10                                                  --------->GLK1(2)                                        --------->YAB1                                        <---------ICU4                                        --------->ATHB12                        <---------AtLEC2-------->HAHB4                       --------->ZAT18 <---------YAB1         <---------ANAC58              <---------ATHB12         <---------ANAC58    <---------TOE2(3)--------->HSFB2a(2)            ---------->ID1 -ARR14(2)         <---------MYB52(1)  --------->ICU4            <-----------GT1 <<<<<<<<<TBF1 >ARR14(2)       --------->MYB52(2)<---------YAB1<---------GLK1(2)  --------->TOE2(3)   atttgtttgtatcgttccttcgttgtgcattgatgttcttaatgattactagaatctaagtcagaagttacctctatttgttcttcttctatatttgaac  4788800                                                                                      --------->ALFIN1                                                                                    <---------TGA1a                                                                                    <---------ANAC46                                                                                    --------->TGA1a                                                                                    <---------bZIP60(2)                                                                                    <---------ANAC58                   --------->MYB46(3)                                               <---------O2            <---------ANAC46                                  ------>ZmHOX2a(1)     --------->O2            <---------ANAC58                                  --------->LBD16       <---------ANAC55(2)            <---------ANAC58                     <---------ANAC58                   --------->ANAC55(2)         >>>>>>>ZML2                             <---------ANAC58                   <---------ANAC55(1)    <---------ANAC58               <----------DOF2          <---------LBD16         <---------ANAC58    <---------ANAC58       ------>ZmHOX2a(1)     <---------ANAC46     --------->HSFB2a(2)   tagatttcgttctagcgtcgaacaaactcctcgttttctttgattcgcattgctggtgattttcctgaatttcgagatttagcgagacgtgtctcgagtt  4788900                                               ----------->HVH21                                             --------->YAB1                 <-----------GT1     --------->YAB1        <---------LBD16             <---------YAB1               <-------GAMYB      --------->WRKY12            --------->YAB1      <-----------HVH21      ----------->HVH21          ----------->GT1    <<<<<<<<<SUP --------->At4g35610            -----   <-----------RAV1(1)  <---------LBD16     <-------TEIL        <---------MYB46(3)              <----   ctcttgtgttgacgggatttttcttatctggagaactgataatagtttcatgacactgtcactggtctgttgaattgtagtttaaacttattccatcgga  4789000                                                                                                    <                                                                                                    =                                                                                                    -                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   <-            --------->ZAT6                                --------->ATHB12                -----------          <-----------GT1                             ----------->GT1                     <---------- ---->ARR14(2)                                <---------ZAT6    <---------REM1(1)        <----------- -----ARR14(2)          <---------ANAC46    <---------ANAC46   <---------TOE2(3)         <-----------   tatagtgactcttaactctataagttgctgattttgtagatgggtttagtgttatcaggtttattgatgtaacaacgagtttacaaactttgctatttag  4789100  Previous    Next  AGI:  At1g13980.1    Description:  GN (GNOM). Identical to Pattern formation protein EMB30 (EMB30) [Arabidopsis Thaliana] (GB:Q42510;GB:Q38883); similar to sec7 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G19610.1); similar to pattern formation protein, putative [Arabidopsis thaliana] (TAIR:AT5G39500.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61434.1); similar to hypothetical protein OsI_012527 [Oryza sativa (indica cultivar-group)] (GB:EAY91294.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63370.1); contains InterPro domain SEC7-like; (InterPro:IPR000904) Range:  from: 4788556    to: 4794651    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version