Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      <---------AHL20(1)                                                                    --------->AHL20(1)                                                                    --------->AHL20(2)                            --------->DAG2                          <---------AHL20(2)   <-----------GT1     ------>ZmHOX2a(1)                           <---------AHL20(2)  <-----------GT1      --------->LBD16                          --------->AHL20(2) -->TOE2(3)          ----------->RAV1(2)           <---------ICU4  --------->AHL20(2) -TOE2(3)           ------>NtERF2 <---------ARR14(2)           --------->AHL20(2) --GT1        <---------At4g35610 --------->ARR14(2)           <---------AHL20(2)   atattttccaattttctactgcctcctgaaaaattggatttggacatgtctgaacattactcaaaataaataaatttagctagtttttgaaataagaaaa  4776200                                                  --------->ANAC58                         <---------ARR11(3)                                                  --------->ANAC58           <---------ANAC58      <-                                            <-----------GT1                <---------ARR11(3)      <-                    ----------->GT1     <---------DAG2                 ---------->DOF2     --------->ARR11(3)                   <------ZmHOX2a(1)    <----------DOF2             <---------TOE2(3)      --------->ARR14(2)           <---------MYB52(1)     <---------------AtSPL8     ---------->DOF2 <---------ANAC58      <-   <---------------AtSPL8         --------------->AtSPL8 ---------->DOF2   --------->ARR11(3)  ------   --------------->AtSPL8         --------->DAG2  --------->ANAC46---------->DOF2          <---------ARR14(2)   <---------------AtSPL3        ---------->DOF2--------->ANAC46  --------->MYB52(1)      <---------CCA1(2)   catagtaagtaccgttttgaaggagaaaaaacaaataaagtactttttacacacgaaaaaaaagaaagtaaaggaaagagcttgtttcacatatatctgc  4776300                                                         ------>ZmHOX2a(2)                                                         <-------TEIL                                                        <------ZmHOX2a(2)                                                       --------->AGP1      <----------DOF2                                  <---------ARR11(3)  --------->WRKY38(1)                                  <---------ARR14(2)  <---------ZAT18                   <-----------GT1    --------->ARR14(2)  --------->ZAT18          --------->DAG2           --------->HSFB2a(2) --------ANAC58           ---------->DOF2           <---------HSFB2a(2)                             < --------ANAC58      --------->ANAC58            <-----------GT1                           <---------GLK1(2) --------ANAC46      --------->ANAC58         <---------YAB1       XXXXXXXXXXXXXXXXXXXXX>MIR850    <- --->At4g35610      ------->TEIL   <---------AHL20(2)  <---------GLK1(2)               ---------->DOF2   agcgtggactttctctactgcgaacccaaaaagttttttaatctttttatgtttccagatccgttttaagaccagaagtacaaaaaaaaaaaagaaactc  4776400                                                                                --------->ANAC46                                                                                --------->ANAC58                                                                                --------->ANAC58                                                                           <---------ARR14(2)                                                                           <---------GLK1(2)                                                                        --------->ANAC58                                                                        <---------ANAC55(2)                                            <----------ID1              --------->ANAC58                                            ------------------------>ANAC81--------->ARR14(2)                                <----------ID1                          --------->ANAC55(1)                                ----------->GT1                         --------->ANAC55(2)                              ---------->DOF2           ---------->DOF2<---------LBD16           xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)----------->GT1         <---------REM1(2)          ---------->DOF2   --------->YAB1 --------->RAP2.6(3)     --------->ANAC58    ----------------->AGL3  <---------AHL20(2)      --------->DAG2 --------->ANAC58 ---------ARR11(3)          --------->AHL20(2)     ---------->DOF2 --------->ANAC46 --------->ZAT14 --------GLK1(1)         --------->YAB1   --------->MYB52(1)       --------->bZIP60(2)       --------   gaaatctccattaaaagagcctatcgataataaaaagaaaaacaaaacggcaaaaaagtgaagcgaaacacgacacggattcacacaatactcagatata  4776500                                                                                  <------MYB83                                                                                  <------MYB46(1)                                                                                  <---------MYB46(3)                                                                                 <XXXXXXXXXXXXXXXXXXX                                                                               <-------GAMYB                                                                              <---------MYB46(3)                                                                              --------->MYB52(2)                                                    <---------AHL20(2)        --------->MYB55(2)                                                    <------------------------ANAC81              <---------GLK1(2)                 <----------DOF2               <---------AtMYB61      <------ZmHOX2a(1)                 ---------->DOF2                       --------->MYB111(2)   --------->DAG2                   --------->AHL20(2)                        --------->MYB111(1)  ---------->DOF2 <---------YAB1   --------->AHL20(2)      <----------DOF2   <--------P ->CCA1(2)    --------->ARR11(3) --------->YAB1 <---------DAG2              <-------GAMYB        <---   tacaaaaaggattttagattttgattcagaaccaaaaataaaaaaaggaacttttttatttctttgtttgattttttgggttgttggttttttttttgtt  4776600                                                                     <---------ANAC46                                                                     <---------ANAC58                                                                  <---------MYB52(1)                                                                 <-----------HVH21                                                                --------->DEAR3(1)                                         <---------DDF1     <---------ZAT2                                 <---------HSFB2a(1)        <---------At4g35610                    <-                                 <---------HSFC1(2)         <---------GLK1(1)                    <---                                 --------->ZAT2             --------->ZAT2                    -------                        --------->DAG2  --------->ETT(2)    --------->At4g35610              --------                   <---------ANAC46     <---------ETT(2)    --------->GLK1(1)                --------             ------>ZmHOX2a(2)   --------->At4g35610       <-----------ARR10 <---------DAG2  --------           --------->ARR14(2)    --------->HSFB2a(1)     --------->LBD16     <----------DOF2 --------  *TSS <---------LBD16 ---------->DOF2--------->LBD16  <---------LBD16<---------SPL7       <---------ALFIN1 XMIR837-3P<---------ARR14(2)    --------->HSFC1(2) --------->ZAT18  <---------ANAC58     <---------REM1(2) ------MYB46(3)    --------->ETT(1)  <---------ANAC46 --------->MYB52(1)--------->SPL7   ------>ZmHOX2a(1)   tgttaattttggggatcgatgtcggaaaaggaagaagctccgtcgacatcgaagtccaccggagctccgtcgcgtccgactttatctcttcctccacggc  4776700                         <---------ANAC58                         <---------ANAC46                         <---------ANAC58                        <------NtERF2                       ------>NtERF2        --------->ARR11(3)        <---------ARR11(3)       <---------At4g35610<-------GAMYB --------MYB52(1)     <---------DEAR3(1)        --------->WRKY38(1) ------MYB46(3)       --------->ALFIN1        --------->At4g35610 -->DEAR3(1)      <---------At5g28300         <---------At4g35610                             <------ ->ANAC58        --------->MYB52(1)          <---------TOE1(1)                             --------->ARR11(3) ->ANAC58        <---------DOF5.7(2)         <---------TOE2(1)                             <---------ARR11(3) ->ANAC46      --------->DOF5.7(2)        <-----------HVH21                              --------->MYB59 ->MYB46(3)   <----------DOF2           ------>ZmHOX2a(1)                       <---------At4g35610   cgtttagtgagatgttctttaacggtggcgttggattcagtcctggtccgatgactctggtctctaatatgttccctgattccgatgagtttaggtcttt  4776800                                                       <---------ZAT2                                                       <---------At4g35610                                                    <---------ZAT2                                                    <---------At4g35610                                                   <-----------RAV1(1)                                                 <---------At4g35610                                                 --------->At4g35610                                                 <---------ZAT2                                                <-----------RAV1(1)                                              <---------At4g35610                                              <---------ZAT2                                              --------->At4g35610                                             <-----------RAV1(1)                                           <---------At4g35610                                           --------->At4g35610                                          <-----------RAV1(1)         --------->ATHB12                                        =================RAV          <---------ICU4                                        ====================RAV------>NtERF2                                        <---------At4g35610   <---------DEAR3(1)                                        --------->At4g35610  --------->ATERF1(1)                                        <---------ZAT2 --------->ZAT2--------->ICU4    <---------GLK1(2)                   ----------->RAV1(2) <---------ATERF1(1)   --------->At4g35610                  =======================RAV ----------->GT1   <---------At4g35610                  --------->ZAT2 --------->At4g35610   <---------ZAT2                    <---------At4g35610   ----------->HVH21 ----DOF2                            <---------ZAT14--------->At4g35610                <---------REM1(1)   ctctcagcttctcgctggagccatgtcttctccagcgactgcagctgctgctgctgctgctgcgacggctagtgattaccagagacttggtgaagggact  4776900                                             -------->P                                             ------>MYB83                               --------->ANAC58                                                 =====                               --------->ANAC58           <---------GLK1(1)                     -----                               --------->ANAC46         --------->ATHB12                       ------                               --------->AtLEC2         <---------ICU4                       --------                           --------->CCA1(2) --------->MYB52(1)               <------NtERF2 ---------                           --------->GLK1(2) ------>MYB46(1)                 ------>NtERF2<---------SPL7                  <---------WRKY18(1)       --------->MYB55(1)              --------->DEAR3(1)-------                 --------->WRKY38(1)        --------->MYB52(1)           ------->GAMYB    <---------ZAT14                 --------->WRKY12--------->YAB1        <---------YAB1   --------->MYB46(3)--------->ZAT14              --------->ICU4<-------TEIL   --------->MYB46(3)      --------->TOE2(3)   <---------At5g28300        <---------ZAT6 --------->LBD16     --------->AtMYB61       --------->YAB1     <-----------GT1   aatagctctagtggtgatgttgacccgagattcaagcaaaacagaccaaccggtttgatgatttctcaatctcaatcgccgtcgatgttcaccgtaccgc  4777000                    <---------ANAC58 ==========================RAV     <---------DAG2                       <-------TEIL ------>RAV1(2)     <---------ANAC58                        <---------TOE2(3) >NtERF2   <---------At4g35610  ------>MYB46(1)            <-----------RAV1(2) ->DEAR3(2)--------->ZAT2       ------>MYB83             <-----------HVH21 >SPL7     <---------ZAT2  <-----------GT1   <----------DOF2<---------TOE1(3)                <------- -->DEAR3(1)   <-----------RAV1(1) <----------DOF2   <-----------------AGL1              <---------CCA1(2)   ctggtttaagtccagctatgttgctcgattcaccaagctttttgggtcttttctctcccgttcaggtttttagattcatcaacacaaatttctatctttt  4777100  Previous    Next  AGI:  At1g13960.1    Description:  WRKY4 (WRKY DNA-binding protein 4); transcription factor. Identical to Probable WRKY transcription factor 4 (WRKY4) [Arabidopsis Thaliana] (GB:Q9XI90;GB:Q93WN8;GB:Q9LMG1); similar to WRKY3 (WRKY DNA-binding protein 3), transcription factor [Arabidopsis thaliana] (TAIR:AT2G03340.1); similar to DNA binding protein WRKY2 [Vitis vinifera] (GB:AAT46067.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) Range:  from: 4776602    to: 4779397    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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