Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     ---------->DOF2      <---------ARR14(2)      --------->ARR14(2)      <---------ARR14(3)      <---------ARR11(3)                                     --------->GLK1(2)     ------>MYB46(1)      --------->ARR14(3)                           --------->ARR14(2)         <-----------GT1 ---->GT1         --------->YAB1       --------->MYB59       --------->ARR11(3)    ------>MYB83 -TGA1a ------>ZmHOX2a(2)         <---------TOE2(3)--------->GLK1(2)       <---------------AtSPL8 >TGA1a<------ZmHOX2a(2)         ---------->DOF2   <---------ARR14(2)      --------------->AtSPL8 -O2  --------->ARR11(3)    <---------GLK1(1)     <---------GLK1(2) <------ZmHOX2a(1) ----------->GT1 >O2 <------ZmHOX2a(1)      --------->GLK1(1) ---------->DOF2<---------ARR11(3)  <---------MYB59   caaaataggatcttgagtaatcaaagttggaaatctaaagttagataacaaagaatctgcaaaaatcttaggacaagattgtaccaaatagaaattaaca  4766300                                                                                         --------->TOE1(3)                                                                                         --------->TOE2(3)                                                                               <---------YAB1                                                                            <---------YAB1                                  <---------At4g35610                    <---------RVE1(1)          <                                  --------->At4g35610                   --------->ARR11(3)         <-           <----------DOF2     <---------At4g35610              <---------AHL20(2)    <-----------GT1        ------>MYB83 ----------->GT1                           --------->YAB1<---------AHL20(2)    <-        ------>MYB46(1)     ---------->DOF2     --------->AHL20(2)      <---------ARR11(3)       <---   aaaaaaaaccaagctttaatctagggaaaattaagcagatgaaattgaaattaaaacagagtttataaaaatgagatttttatttttgttacctcaaacc  4766400                                                                             <----------ID1                                                                          ---------->DOF2               ------>MYB46(1)                                --------->ARR11(3)               -------->P                          --------->AHL20(2)   --------->YAB1              ------>NtERF2                        <---------AHL20(2) ------->TEIL ---------ARR11(3)   ---------->ID1          --------->ANAC58 <---------ARR11(3)    ----------->GT1 --------CCA1(2)     ---------->ARF1         --------->ANAC58 --------->GLK1(2)    --------->DAG2 --------ALFIN1------>MYB83              >>>>>>>>>TBF1       --------->RVE1(1)    ---------->DOF2<--- ------ALFIN1--------->DEAR3(1)      --------->At4g35610   --------->AHL20(2)----------->GT1  <------   cacatcttcttatcgccaaccttgtctcaaaactttctcagaagaagaagcaatttataaaaaaaatctatgaatcaaaaggaaaaaagtaagaattttt  4766500                                                       <---------ANAC46                  <---------YAB1                                                      <---------LBD16                  --------------                                                     <---------ANAC46                  <-------------                                                    --------->ALFIN1                  <--------------         --------------->AGL15                    <-----------RAV1(1)                 <--------------         <---------------AGL15                    --------->ALFIN1                    <--------------        =============================================================================================        <-----------------AGL3                 --------->DAG2                         ---------------  <---------ARR11(1)                          ---------->DOF2                         ---------------  ------->TEIL                           <---------AHL20(2)                         --------->ANAC46< <---------CCA1(2)                       --------->AHL20(2)                   <---------ANAC46     -- <---------GLK1(2)                       --------->AHL20(1)   ----------->GT1 <---------ANAC58     <- --------GT1                        --------->AHL20(2)<---------MYB46(3)      <---------ANAC58     <- ---AHL20(2) ---------->DOF2 ------------------------>ANAC81<---------ANAC46  ----------->GT1      --   ttcgaatctctctactaaagggaagattgagaaacaaaaaaaataaaataaagtgttggggggagggtataagagttatagcgtaaacaccattaatgga  4766600      --------->ARR11(3) ->AGL15 --AGL15 ---AGL1 ---AG<---------ARR11(3)                                    ----------->GT1 ---AGL3                                                    <----------ID1            --------->ARR14(2) ===MADS_MADS                  <---------ALFIN1           ---------->DOF2             <---------ARR14(2) -->AGL2     <---------At4g35610                     --------->MYB52(1)              --------->GLK1(1) -->AGL3------>ZmHOX2a(2)     <---------ZAT18      <---------MYB52(2)                <---------GLK1(1) ---------ICU4              <---------PCF5       ------>MYB83                   ---------->DOF2 ------->AHL20(2)       <---------ZAT2         <---------MYB111(2)           <------ZmHOX2a(1) --------AHL20(2)       --------->ZAT2         <---------MYB46(2)          ----------->GT1          < --------ATHB51         ----------->RAV1(2)   --------->ANAC46          <------ZmHOX2a(1)   <-------- ------->ICU4--------->At4g35610 <---------ALFIN1------>MYB46(1)      <---------TOE2(3)     <--------   aataattagatcgtcatcttcgatctagctgggccactcttctctctcaccaaactaacaaaaagaaaaattgaggagaggaaaaagaaatctgctttat  4766700                                                                                             --------                                                                                           --------->YAB1                                                                                       ---------->DOF2                                                                                     --------->LBD16                                                                                   ------>ZmHOX2a(2)                                                                                  --------->CCA1(2)                                                                                  <------ZmHOX2a(2)                                                                                 --------->ARR11(3)                                                                                 <---------ARR11(3)                                                                                 --------->ARR14(2)                                                                                 --------->ARR11(1)                                          --------->YAB1                         <---------ARR14(2)                                         <---------YAB1                          --------------------                                       --------->YAB1            <------ZmHOX2a(1)--------->ARR14(1)              <<<<<<<<<TBF1           --------->ICU4       <---------YAB1       <---------HSFB2a(1)  <---------At4g35610             --------->SPL7           <---------AHL20(2)   <---------GLK1(1) -----------GT1                   <---------------------WRI1     =========================HOX2a_HOX2a --DOF2    <<<<<<<<<TBF1     <---------ANAC46 *TSS ----------->GT1             ----------->ARR10  --- -DAG2  <<<<<<<<<TBF1     ----------->HVH21  ---------->DOF2     ========================HOX2a_HOX2a-   atttagcttcttcttcttcttcttgtatgtgagggggacgatgatgataaagaaggtttatattataggagaagagaagagaagatccgaaaatcagaag  4766800                                                       --------->AHL20(2)                                                      --------->ICU4                                          ----------->GT1              <---------MYB52(1)        --------->AHL20(2)              --------->ZAT14--------->AHL20(1)  ----------->GT1                       <---------ZAT14<---------AHL20(2) ->At4g35610                      <----------DOF2     <---------ATHB51--------->LBD16            <--- ---->ANAC81                     <---------ANAC58     <---------AHL20(2)                         <--- --------------------->ANAC81    <---------ANAC58     --------->AHL20(2)          <------------------ ---------->GT1             <----------DOF2 ----------->HVH21    --------->MYB46(3) <----------DOF2   aagagagaaaataaaaacaaaaaacgagggctttggcttttgtacagtgacatgaaataatttgtcaacatccggtcttctcttcccttttattctctgc  4766900                                                                                             <-------TEIL         <----------DOF2                                                                 <-----------        ====================================================================================MADS_MADS        <---------DAG2                                                                   ------------        --------------->AGL15                          --------->ICU4               <---------YAB1     <-----------GT1                                 --------->YAB1              <---------AHL20(2) ------DAG2                                <---------At5g28300 --------->YAB1    <---------YAB1   <-- -------DOF2                     <----------DOF2  ----------->GT1               --------->AHL20(2)--- ------ANAC81               <<<<<<<<<TBF1 <-----------GT1     --------->ZAT6--------------->AGL15 <--   tttttcttcaccttttttagttctctcttcttcttcttttttttttaccatcttgtaataactaatactaatattcttccatttttattattaagtacat  4767000       <------ZmHOX2a(1)       ----------->GT1                                                                        <------  --------->YAB1                                                                              <------ <---------YAB1                                                                               ------- ----AtSPL8                                                                                   ------- --->AtSPL8                                 <---------AHL20(2)                         <---------ARR11(3) -------YAB1                               --------->AHL20(2)           <---------AHL20(2)   -------- ------>AHL20(2)           --------->WOX13(1)                          --------->AHL20(2)--------->AHL20(2) -------AHL20(2)   <------ZmHOX2a(1)    --------->YAB1       <---------AHL20(2)  <-----------GT1   <-   attattataggataaaaaacaggatttatcaattagtttgactcataaaattcttggttctattttttagggattaaatgatttttcaagataaatttta  4767100                                  <---------TOE2(3)                             <---------AHL20(1)                             --------->AHL20(2)  <---------YAB1             --------->AHL20(1) ---AHL20(1)            <---------AHL20(2) ---AHL20(2)            --------->AHL20(2)<----------DOF2                              <------------- -->AHL20(1)        <---------AHL20(2)   <---------DAG2                                -------------- -->AHL20(2)    <---------YAB1  <---------AHL20(2)                         --------->AHL20(1) ->AHL20(2)----------->GT1  <---------AHL20(2)                             --------->AHL20(2) --------AHL20(2)   --------->AHL20(2)<-----------GT1      <---------YAB1  <---------AHL20(2)   ttttatgcttaatttgttatatttatttaaatattttatgttacctttttagtttttagttttcattccatttgaaataaaataatctactacattgagc  4767200  Previous    Next  AGI:  At1g13940.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G69360.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65039.1); contains InterPro domain Protein of unknown function DUF863, plant (InterPro:IPR008581) Range:  from: 4762700    to: 4766746    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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