Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <------MYB83                                                            <------MYB46(1)                   <-------TEIL                          <-------GAMYB            <----------DOF2                <------MYB46(1)                  ----------->HVH21          ------>ZmHOX2a(1)                <------MYB83                   <---------O2<---------MYB46(3)    --------->HSFC1(2)                ----------->GT1                <---------ANAC46--------->ZAT18   <---------HSFB2a(1)               --------->MYB111(1)             --------->O2<---------AtMYB61<---------HSFB2a(2)    --               <---------------AtSPL8          --------->TGA1a <---------ZAT14   <---------HSFC1(2)<-              <-----------RAV1(2)              <---------TGA1a <---------ZAT18   --------->HSFB2a(1)         =================RAV                  ==================MYC_MYB    --------->HSFB2a(2)    <-         <-----------RAV1(1)                   ==============================================bZIP_DOF        ------->TEIL               <----------DOF2--------->REM1(2)     --------->ARR11(3)         <- ------->TEIL <---------ANAC46     ======================bZIP_DOF     --------->DAG2  ----------->HVH21   atgtatcatgtatgtggcaggtacatagaagggaatgctttcaaatcagacgtgaaggcgattggtgcacataaggtcctcgaactttctgacacagact  4757800           <---------ANAC46           <---------ANAC55(2)          --------->MYB59                              <---------ZAT6       <-------TEIL ------------->AGL15                        <------ZmHOX2a(1)           <---------YAB1 --------ANAC46                          --------->CCA1(2)              <---------TOE2(3)         <-- --------ANAC58                         <---------ARR14(2)              <---------TOE1(3)  --------->DAG2 --------ANAC58         <----------DOF2 --------->ARR14(2)     ----------->GT1            ---------->DOF2   tccttgtttagttatgtatagcacaactttgtttcatttacagataggaatttggcagtgttaactggttatttaagattcattttctctgttaaagcga  4757900                                                                                <----------DOF2                                   ------>ZmHOX2a(1)               <---------ARR14(2)                                  --------->TOE2(3)                --------->ARR14(2)  <-----------RAV1(1)                                  <---------ANAC58                <---------GLK1(2)  <---------At5g28300                               --------->GLK1(2)             ---------->DOF2 ---------->ID1                              <---------GLK1(2)            ----------->TBP <---------MYB46(3)                          ---------->DOF2            --------->AHL20(2)  --------------------->WRI1 ----------CBF    <---------YAB1  <---------ANAC58 <------------CBF--------->GLK1(2)<-----------GT1--   gattgtagttgatgtgttttctgaatgtaaaagattccttatccatgtatgaaaattgaatataaaaggaatctggtttgttcttttcactgtcgttttg  4758000                                                                                                    -                                                                                                 ----                                                                                              -------                                                                                              -------               --------->DAG2                         <---------DAG2        <-----------------AGL3 --      <---------MYB52(2)                              <----------DOF2       ------>ZmHOX2a(2) -------    ---------->DOF2                                <-----------GT1      <---------YAB1      <-------- --------->ANAC58                                <----------DOF2    <----------DOF2         <-------- --------->ANAC58--------->At4g35610     --------->DAG2       <---------ALFIN1              <-------- -------->DOF2---------->DOF2           ---------->DOF2   ----------->RAV1(2)         ------->TEIL --   agaaagcaaagaaccaaaaagctgaagagggagaagaatagaaaaagtgttctttactttacctgcacatctttatgatccaaatatgaaacttgcatgc  4758100     --------->YAB1     <---------ICU4    --------->ICU4    <---------ATHB12 ----------->CBF ------>DOF2 -->ANAC58 -->AtLEC2 ------->ANAC58                                                                                   <-- -->ANAC58                                                   <---------ALFIN1                   ----- -ANAC58                                                     --------->ANAC46                 <------ -AtLEC2          --------->TOE1(3)                         --------->MYB46(3)           --------->TOE1(3) -ANAC58--------->TOE2(3)   --------->AtMYB61               <---------MYB55(2)           --------->TOE2(3) ------->ANAC58   --------->TOE2(3)                       ------>ZmHOX2a(1)           <---------GLK1(1)   aaagcaataatctcaaaaacccttaaaaaaccaaaaccctcaaacacatcttctcaagtcctcccaccatattttagtttgaaaatggataccttaatca  4758200                                                                                                  <--                                                                                                  <--                                                                                                  ---                                    <-----------GT1                                               ---                                 <---------ARR11(3)              ----------->GT1                 ----                                 <---------ARR14(2)             <---------TOE2(3)           <------ZmHOX2a(1)      ----------->GT1            --------->ARR11(3)       --------->AHL20(1)             <-----------RAV1(2) -------At4g35610                <---------GLK1(2)        --------->ARR11(3)             <---------LBD16 ---->WOX13(1)     <---------ARR11(3)          ----------->RAV1(1)                <----------DOF2---- ---ATHB12   <-----------GT1     --------->ARR14(2)   <-------TEIL              <---------YAB1 <-----   agcagacaaggtaattcactaaatctccaaattcagattttctattcagccacatatacatatattgatgtaaaatgttgttatctttgtctcaggagga  4758300                                  <--------P            --------->LBD16     <------MYB83           <---------LBD16      <---------MYB46(3)      <---------GLK1(2)        --------->MYB111(1)     --------->At4g35610       <---------AtMYB61     --------->ZAT2            --------->MYB111(2)     <---------ZAT2            --------->MYB46(2)     <---------At4g35610       <---------MYB46(3) -------HSFB2a(1)             <--------P                         --------->ANAC58             ------- -------HSFC1(2)            <---------MYB46(3)                <---------At4g35610            <------NtERF2 ------>HSFC1(2)  --------->AHL20(2)<---------At4g35610       <---------ZAT2             <---------HSFB2a(1) ------>HSFB2a(1) --------->ICU4<------MYB46(1)       --------->DAG2                     --------->HSFB2a(1) ----->ANAC58     <---------AHL20(2)--------->At4g35610   <-----------HVH21              --------->HSFC1(2) ----->ANAC58 <------ZmHOX2a(1)--------->MYB59       ---------->DOF2            --------->AtLEC2 -ZmHOX2a(1)<---------TOE1(2) <---------MYB55(1)----------->GT1  --------->ANAC58  ---------->DOF2   agcatccagcttcccaggaaaaaattagagaggttggtagctcaactagagagaaaaaagtgtcagcaaggaagtctgtttcattcaaagaaggtgccac  4758400                                               --------->AHL20(2)                                               <---------AHL20(2)             <--------P           <---------MYB52(1)                 <---------WOX13(1)            <------MYB83          <-------GAMYB                  <---------ANAC58                   <------MYB46(1)         <-----------RAV1(1)             <---------ANAC58                <-------GAMYB     <---------At4g35610               <---------YAB1                   <-----------RAV1(1)     <---------ZAT14              <----------DOF2              <---------CCA1(2)     --------->ZAT14            <---------ATHB12             --------->YAB1 <---------MYB46(3) --------->GLK1(2)            --------->WOX13(1)     <-----------GT1    --------->ALFIN1 ---->RAV1(1)               <---------ATHB12--------->ATHB12<---------YAB1 <---------AtMYB61   aaaattctgctctgttgttcttaatagcctatcaatctttgatgcttgattaatttcacattatcatatcatgtgtgttggtagataagaagaagccttc  4758500                                                                               <-------GAMYB                                                                               --------->At4g35610                                                                               <---------At4g35610                                                                           ------------>AtMYB77                                                                         <---------ZAT2                                                                         --------->ZAT2                   <---------HSFB2a(2)                                   --------->At4g35610                   --------->HSFB2a(2)                                   <---------At4g35610                <---------ARR14(2)                                      ------->TEIL                --------->ARR14(2)           <---------YAB1          --------->AtLEC2  <---------ALFIN1       <---------HSFB2a(2)        --------->ZAT18                --------->ARR11(3)   --------->MYB46(3)       --------->HSFB2a(2)    --------->ATHB12   ------>ZmHOX2a(2)<------ZmHOX2a(2)  ------>NtERF2   aaactggttacagaagcagttctcgaggcaaatgagtggccaaagttatgatcccatcggagaaatggatcatgcagctgcagttgcagccactgcctat  4758600                                           <------------MYB.PH3(1)                                         <-----------GT1                                         --------->MYB52(1)                                        ----------->HVH21                                          <-                                      --------->ANAC55(2)                                         <--        <----------DOF2               <---------ANAC55(2)                                         ---        <---------DAG2              --------->YAB1                     <---------ZAT6--------->ANAC55(2)   gccatagccacttttgaagaaacttggctagagaactatcatgtaacggtttttaaaaacagagtttttgttagagtaaacattttctcgtaatttgagt  4758700  Previous    Next  AGI:  At1g13910.1    Description:  leucine-rich repeat family protein. similar to protein binding [Arabidopsis thaliana] (TAIR:AT5G61240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41879.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 4755781    to: 4757988    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g13920.1    Description:  remorin family protein. similar to remorin family protein [Arabidopsis thaliana] (TAIR:AT1G69325.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63833.1); contains InterPro domain Remorin, C-terminal region (InterPro:IPR005516) Range:  from: 4758185    to: 4759751    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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