Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <---------MYB59            --------->ZAT2                                            ----------->HVH21              <---------ZAT2                                          ----------->RAV1(2)              --------->At4g35610        --------->YAB1                    --------->At4g35610     --------->GLK1(2)     --------->YAB1                       <---------At4g35610    <---------GLK1(2)                <-- ------->GLK1(2)                  --------->WOX13(1)             <---------ARR14(2)               <-- --->ANAC58                      ------>ZmHOX2a(2)               --------->ARR14(2)     --------->YAB1 --->ANAC58                      =================================HOX2a_HOX2a --------->ANAC58    <-- --->ANAC46            <---------ETT(2)  <---------ARR11(3)------>ZmHOX2a(1)  --------->ANAC58   <--- ----AGL15        ----------->RAV1(2)--------->YAB1   <----------DOF2      <---------At4g35610  <----   gaatctacaataacaatctcgcctgtcgaaactgatctatcaacatctgacctaagctttcctctcagattcttctcagcaggcatgttagcatagtttt  4748200       --------->HSFB2a(2)       <---------HSFB2a(2)  <---------ANAC46  <---------ANAC58                               <---------ANAC58  <---------RAP2.6(2)                            <---------ANAC58                        <---------At4g35610  <---------ANAC58                            <---------MYB52(1)                      <---------ZAT14 -------ANAC58                         --------->ZAT6                              <---------At5g28300 -----GAMYB                         ------>ZmHOX2a(1)                         <---------TOE2(3) -------ANAC58                    ------>ZmHOX2a(2)                       --------->At4g35610 ------MYB46(3)                 <---------ARR11(3)                        <---------At4g35610       - -----AtMYB61                   --------->ARR11(3)           <----------DOF2 ---------->DOF2    -----   ggttgcggtctagatgaaacgaagcctcatcgatgatcctaacactctgtttcgtttcagactctttcaatgtttcagctaaagttactgcagctattga  4748300  --------->ZAT6                  >>>>>>>>>>>>>>>>>LFY ------->P                   <---------MYB52(2)<-----------GT1 ---------->AtSPL3      --------->YAB1<---------MYB52(1)                 <---------ICU4            <-   cttaccactacaaggttgcccacaaatcacaactagcgccattggtttttaaacacactgcctacaaaaatggaatcaatacaagactatttcaattcaa  4748400                                                                                   --------->YAB1                              --------->MYB52(1)                                  <---------YAB1                            --------->MYB46(3)                                  <---------CCA1(2)   <                            <---------MYB52(2)                               <-------TEIL           -                       --------->ANAC55(2)                             --------->LBD16--------->MYB52(1)                       --------->ANAC55(1)                            --------->HSFB2a(2)  --------->ARR14(2)      <-------TEIL     <---------ANAC55(2)      <-------TEIL          <---------HSFC1(1)<------------MYB.PH3(1) ---------DOF2         --------->ANAC46  <----------DOF2              <---------HSFB2a(2)  <---------ARR14(2)   gctttaggtgcataagaacatcaacacataacaaacgaataagctttagattcacatataaaaactaaaattccagaaattcatatcataacggattcaa  4748500             <---------TOE2(3)            ---------->DOF2                       <---------YAB1  --------->LBD16                                <-----------GT1 --------->HSFB2a(2)         <---------------AtSPL8                               <---------ICU4 --------->ANAC46            --------------->AtSPL8                          --------->YAB1 ---------LBD16             <---------YAB1      --------->YAB1        --------->ANAC58 -------->LBD16         <----------DOF2        --------->ICU4         --------->ANAC58              <   tccccagaacaagttaaagtatcaaactttattagtacatacttccacaattatcaattccgacgaaaaatcaagctaataaaaacattaccagagaaaa  4748600                                       *TSS                                 ----------->GT1                           --------->ANAC58                                                       <--                           --------->ANAC58                                                      <---            --------->ETT(2)    --------->DAG2                                             <------MYB46(1)            <---------ETT(2)   ---------->DOF2                                   <---------AHL20(2) <      --------->ALFIN1   ---------->DOF2             <---------ARR14(2)      ----------->GT1  <------ ---------LBD16<-----------RAV1(2) ----------->GT1   --------->GLK1(2) ----------->ARR10   <------MYB83   attcgggagtgttgtcgacaggttgaagaaagcaaaagtgaaaatttgatttgggaatctagggcttatagattagaaccggtttaattcgcttggtccg  4748700                                                     --------->GLK1(1)                                                     --------->CCA1(2)                                                     <----------TaMYB80                                                     <---------GLK1(1)                                                    ---------->TaMYB80                                                    <---------ARR14(2)                                                    --------->ARR14(2)                                                  --------->LBD16                                                 <---------ANAC46                                                <---------LBD16                                           <-------TEIL                       <-------MYC2                                          --------->CCA1(2)                   ------->MYC3              ------------>CBF            --------->ARR14(1)                  <-------MYC3       <--- -------MYB52(1)                         --------->ARR14(2)                 <-------TEIL        ----- ------MYB52(1)                          <---------ARR14(2)           <---------ANAC58 <---------ARR14(2) ---------MYB46(3)                     ----------->ARR10              <---------ANAC58 --------->ARR14(2) ---LBD16  ------->TEIL  <---------LBD16 --------->ARR11(1)----------->RAV1(1)------->MYC2   --------   gtttgttcatatgaatatcaatttgtgtccggtttagaagatagatacgagccggatatgccaacacaagttgctaggcacgttgatggtatacggtgag  4748800                                            --------->At4g35610               --------->ANAC58             <---------At4g35610                  --------->LBD16     <------MYB83                        <-------TEIL                          <---------LBD16     ----------->GT1                 <---------------AtSPL8                  <---------ARR14(2)     <------MYB46(1)                 <---------------AtSPL3           --------->LBD16    --------->MYB59                  --------->DAG2                   *TSS   --------->ARR14(2) ---ZmHOX2a(1) --------->ANAC46--------->AHL20(2)                 --------->ARR14(2) ------>GT1    --------->ANAC55(2)  ---------->DOF2               <---------ARR14(2)               <- ->ALFIN1      --------->ANAC58<---------AHL20(2)                <---------GLK1(1)         --------->GLK1(2)   gataatttggtaaattcaagtaattcaaagaatttaaataaagtacagctcattcgatgttgtctcggtatccgagttaaatccgggtttcaaaatcggg  4748900                                                            <---------AHL20(2)                                                            --------->AHL20(1)                                                            <---------AHL20(1)                                                            --------->AHL20(2)                      ------->TEIL                         --------->AHL20(2)  ------>MYB83                   --------->ANAC58                   --------->LBD16          ------>MYB46(1)                   --------->ANAC58                  --------->ANAC46        <---------MYB59               --------->ANAC58                 --------->KAN4(2)          ------>MYB83               --------->ANAC58                --------->HSFC1(2)          -------->P             ---------->DOF2                   <---------HSFB2a(1)   <-----------GT1             ----   ----------------->AGL1                      --------->HSFB2a(1)  <-----------GT1              <---  <-----------------AGL1 <-----------GT1<----------DOF2<---------ALFIN1    ------>MYB46(1)       ---- ---------DOF2--------->DAG2   ------->GAMYB   <---------HSFC1(2)<---------AHL20(2)              <---   tctttcccctaatcgaaaagcacgaattttcaaccctagccgctttcgaaaattcccccaattttatttttttcccctaccaaattttcttcgaatttca  4749000                                   ============================HOX2a_HOX2a                                  =============================HOX2a_HOX2a                                  <------ZmHOX2a(2)                                 <---------ARR11(3)                                 --------->AGP1                                 --------->ARR11(3)                                 <---------AGP1                                 --------->ARR14(2)     ------>ZmHOX2a(2)           <---------ARR14(2)    <------ZmHOX2a(2)           <---------CCA1(2)   --------->ARR14(2)      ====================================HOX2a_HOX2a   --------->ARR11(3)      ------>ZmHOX2a(2)   <---------ARR14(2)    --------->ARR11(3)   <---------ARR11(3)    <---------ARR11(3)  <---------At4g35610 <------ZmHOX2a(2)                             ------>ZmHOX2a(2)  --------->At4g35610<---------ARR14(2)           <<<<<<<<<TBF1   --------->ARR11(3)                < ----->ZAT2          --------->AGP1------>ZmHOX2a(2)        --------->ATHB12                        < ------At4g35610     --------->ARR14(2)       <-----------GT1     <---------ARR11(3)             <<<< ----->At4g35610  --------->HSFB2a(2)  ----------->GT1  ===================HOX2a_HOX2a       <------- ------ZAT2       <---------HSFB2a(2)  --------->YAB1   ------>ZmHOX2a(1)      <-----------GT1-------   gctcagatcccttccttcttccagatcgatcttcagatctattgtaattttcttcttcctcttgatttgatcttccaattgatacctgttttgttatcat  4749100  Previous    Next  AGI:  At1g13870.1    Description:  DRL1 (DEFORMED ROOTS AND LEAVES 1). similar to unnamed protein product [Vitis vinifera] (GB:CAO41894.1); contains InterPro domain Chromatin associated protein KTI12 (InterPro:IPR013641) Range:  from: 4747262    to: 4748639    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g13880.1    Description:  ELM2 domain-containing protein. similar to myb family transcription factor / ELM2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G03470.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO41886.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain ELM2 (InterPro:IPR000949) Range:  from: 4748870    to: 4751209    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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