Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    --------->At4g35610                                  <---------ZAT2                                  --------->ZAT2                                            <--------                      <------ZmHOX2a(2)                                                     ---------                     --------->ARR11(3)                                                     <--------                     <---------ARR11(3)                                                     ---------                     <---------ARR14(2)                                                 --------->ALFIN1                     --------->ARR14(2)                                               <---------ANAC58        <----------DOF2  ------>ZmHOX2a(1)                                            <---------AtLEC2     <---------ARR11(3)------>ZmHOX2a(2)                                              <---------ANAC46 ----->CCA1(2)      <------ZmHOX2a(1)                              <---------YAB1     <---------ANAC58 -----ARR11(3)    <---------TOE2(3)       ----------->GT1     <---------AtLEC2      <---------YAB1 ---->ARR11(3)  ---------->DOF2   <---------At4g35610   --------->ATHB12        --------->ARR11(3)   tatacaataactttgatataaaggatcctcaagtgaagctgagagagtttaaaccgaagcattggcatgaagattgcaagaagattatgcgtggagctga  4735100                                                                                                    <                                                                                                 ----                                                                                                 ----     --------->At4g35610                                                                     -------- --------->GLK1(2)     --------->MYB52(2)                                                --------->ANAC58 <-----------ARR10   <---------MYB52(1)            --------->ETT(2)                      --------->ANAC46 -ZAT2      --------->ANAC58                --------->ARR14(2)              ----------->GT1  -------- >At4g35610 --------->ANAC46                <---------ARR14(2)              <---------ANAC55(2)  ---- -At4g35610 --------->ANAC58       <------ZmHOX2a(2)     <---------TOE2(3)  <---------ANAC46 -------- >ZAT2 <---------ZAT18 <---------MYB46(3)   --------->GLK1(2)      <-----------GT1       --------->ANAC58   gagaatcagcgcaaacgcaaaccgtttgttctatgagatcgatgggaatcttgtagactgaggtttttgtaactgattatgtgaaatttgcaagcaagca  4735200   <---------GLK1(2) -----------RAV1(2)                         ----------->GT1 ----->ANAC58                        <---------ANAC46                            <---------------AtSPL8 ----->ANAC58                        <---------ZAT6                             ---------->DOF2 ->ANAC58                        --------------->AGL15           --------->ARR11(3) ->ANAC46                       <---------ANAC58                 <---------ARR11(3)  <-------TEIL ----->ANAC46 <---------AHL20(2)<---------ANAC58               ------->TEIL  --------->At4g35610 ->ANAC58<---------MYB52(1)--------->MYB52(2)        --------->ZAT6          <---------At4g35610   agccaggttcccttatttcatttgaatgttatttgcttagtgtggaatgtagaaaacactaaatgaagctcttgtgttgagctaaagtacatatttcata  4735300                                     --------->REM1(1)                                     <---------bZIP60(1)                                     --------->bZIP60(1)                                   <-----------GT1                             <----------DOF2                       <---------ANAC58<---------DAG2                           --------->At4g35610                     <---------ANAC58<----------DOF2             <---------YAB1<---------At4g35610                  ------->TEIL    <-----------GT1 --------->ZAT14        <---------At4g35610<---------GLK1(2) <---------YAB1    <-----------------AGL1   ttgtatactctgtttcttattgtctcatcagcttttgttacatcagaatattggtcagtttttatgaatgcttctcaagttttcacttttggccattgtt  4735400                                      <------MYB83                                    <--------P                                   <-------GAMYB                                  <---------DEAR3(2)                      <-----------RAV1(1)                                  <---------MYB46(3)          <----------DOF2                                 <---------DEAR3(1)         --------->LBD16              <---------At4g35610                                <---------ORA47(1)------------>CBF  --------->AHL20(2)   --------->At4g35610                               ------------>AtMYB77        --------->RAP2.6(2)        <-------TEIL                      <---------ANAC46<------MYB46(1)    --------->At4g35610   <---------ANAC46   tttcttagttctgaaattgcaattgtgtatattggacggttggatttagaggctcaattagccgcattaactaaatatgtggctgtgattcatcttactc  4735500                                               <-----------HVH21                                             ------->MYC4                                             <-------MYC3                                             ------->MYC2                                             ------->MYC3                                             <-------MYC2                                             <-------PIF5                                             ------->PIF5                                             <-------MYC4                                            --------->TGA1a                                            <---------O2                                            <---------TGA1a                                            <<<<<<<<<<ABI5                                            *TSS                                            <--------ABF1                                            --------->ANAC55(2)                                            <---------ANAC55(2)                                            <<<<<<<<<<AtMYC2                                            <<<<<<<<<<HY5                           <------------CBF --------->bZIP60(2)            --------->LBD16                        <<<<<<<<<<<<<<<<<LFY--------->O2                  --------->ANAC46                    ==================================bZIP_DOF         --------->ANAC46              <-----------GT1              <<<<<<<<<<<<AtMYC2   <---------------AtSPL8             <-             <-----------GT1         <---------ANAC58     <---------------AGL15                  ---- --------->ANAC46   <----------DOF2  <---------ANAC58     --------------->AGL15            --------->MYB52(1)   aagacgacagcgttttaaactcctttggacattggtcttacttgccacgtgtcacatcttctctatcgagtacaaaccgcaagtgaaacagagtaacaga  4735600                                           <---------ARR14(2)                                           --------->ARR14(2)                                          <-------GAMYB                                         <---------DEAR3(2)                                      <---------RAP2.3(1)                                      <---------ERF1                                      <---------RRTF1(1)                                      ------------>AtMYB77                                     --------->O2                                     <---------RAP2.3(2)                                     <---------DEAR3(1)                                     <---------O2                                    <------NtERF2                                    --------->ATERF1(1)                                   ------>NtERF2                                   <---------ATERF1(1)                                             <-                                  --------->DEAR3(1)                                               <-                                  <---------DEAR3(1)                                               --                                  ----------->HVH21                                               ---                                 --------->RAP2.3(1)                                              <--                                 --------->ATERF1(1)                                              <--                                 <------NtERF2                                                    <--                                ------>NtERF2                                                    <---                                <---------ATERF1(1)                                              <---                                <---------RAP2.3(1)                                              ----                               <---------RAP2.6(2)                                               <---                               --------->ATERF1(2)                                               <---                               <---------DEAR3(1)                                                <---                               <---------ANAC46                                                  <---                               <---------RAP2.3(3)                                               <---                              --------->ATERF1(1)                                  <------ZmHOX2a(1)<                             <---------ATERF1(1)       --------->GLK1(2)       ---------->DOF2   <---                            ----------->TGA1    --------->ETT(2)             --------->YAB1      <---                            ----------->HVH21  <---------HSFB2a(2)   ----------->GT1             <---                           <-----------HVH21   --------->HSFB2a(2)  <---------------AtSPL8      -----            <---------------------WRI1------>NtERF2   <---------GLK1(2)     <<<<<<<<<ARR2      ------   <------NtERF2          ------->GAMYB <---------DEAR3(1)          --------------->AtSPL8---------->DOF2 --------O2<XXXXXXXXXXXXXXXXXXXXMIR397B<------NtERF2  <---------ARR14(2)    <---------ATHB12  ------- ----->CCA1(2)         --------->MYB52(1)<---------MYB46(3)         <---------KAN4(2)----------->GT1<   gacgcgtcgtcttcaacgatgctctcaacggtgacggcgacggcggtttctcgaccgattctgaaggtggaatgtacaatcaaaaggacgtttaaagtga  4735700       <---------HSFC1(2)       --------->HSFC1(2)       --------->HSFB2a(1)       <---------HSFB2a(1)  <------NtERF2 --------->LBD16 -----NtERF2 --------LBD16 ------->ATERF1(1) --->NtERF2 -------RAP2.3(1) -------RRTF1(1) -------ERF1             <---------SPL7                                 <------NtERF2 ------ATERF1(2)         --------->ORA47(1)                            ----------->RAV1(1) ------DEAR3(1)          <---------RAP2.6(3)                           ------>NtERF2 ----->ATERF1(2)         ------>NtERF2                                --------->DEAR3(1) ------ANAC46           <---------ETT(2)            <-------MYC3      --------->DREB2C(2) ------RRTF1(3)         --------->ETT(2)            ------->MYC3      --------->RRTF1(2) ------RAP2.6(2)        ----------->HVH21          =====================bZIP_DOF     --------->HSFC1(2) ------RAP2.3(2)        --------->DEAR3(1)         --------->O2       --------->ANAC46 ------RAP2.3(3)       --------->DEAR3(2)          <---------O2       --------->RAP2.3(3) ---------DEAR3(1)    <---------At4g35610   ---------->DOF2           --------->ATERF1(2)     ------- ------RRTF1(2)       --------->At4g35610   =================bZIP_DOF --------->RAP2.3(2)     ------- ------bZIP60(1)  <---------ARR14(2)       <---------AHL20(2)         <---------ATERF1(2)     <------ ------O2         --------->ARR14(2)       --------->AHL20(2)        --------->RAP2.3(1)     <------- ---->RAP2.6(3)--------->O2         ----------->GT1<---------TGA1a   --------->ERF1  <---------HSFC1(2) --->MYB52(1)  <---------O2        --------->HSFB2a(2)              <---------ATERF1(1)    ------>ZmHOX2a(1) ---->HVH21   <---------TOE1(2)    <---------HSFB2a(2)       ---------->DOF2         --------->HSFB2a(1) ---------ANAC46--------->HSFC1(2)<---------ETT(2) --------->TGA1a <---------DEAR3(1)<---------HSFB2a(1)   cggcggagaagtttccgacgtttctgccgaccgatgtcgagaaaattaaagacacgtttgctctaaagctcgccgccagaatagagaggcttcctgtatc  4735800                          --------->YAB1      <---------ANAC58   <---------YAB1                           <---------YAB1      <---------ANAC46  <-----------GT1                         --------->YAB1 >TEIL<---------ANAC58 <-----------GT1                       <----------DOF2 -->ARR14(2)       <-------MYC3                              ------>ZmHOX2a(1) ---ARR14(2)       ------->MYC3                            ------>ZmHOX2a(2)     <---------At4g35610 --CCA1(2)   --------->GLK1(2)                      <---------ARR11(3)     --------->GLK1(2)   tgtaagtggcttgagattccacgttttatcattctgaaatttcaaataatccaaggtctgatcctttcatgactgagaatttgagcttatatacaactac  4735900                             <-----------GT1           --------->ZAT2  <-----------HVH21           <---------ZAT2 --------->bZIP60(2)           --------->At4g35610                                                                  -----           <---------At4g35610                                                                  -----  <---------At5g28300     --------->O2           --------->GLK1(2)                            ------- <-----------GT1          --------->TGA1a     <---------YAB1                                 <-------   attttactgtcttagctgcaacttggccatgtcacaattcaagtttttgtgattctgtatttcttacattcaaagtttcaagtgagtagaaacatttaaa  4736000  Previous    Next  AGI:  At1g13810.1    Description:  DNA binding / magnesium ion binding / nuclease. similar to DNA binding / magnesium ion binding / nuclease [Arabidopsis thaliana] (TAIR:AT1G67660.2); similar to DNA binding / magnesium ion binding / nuclease [Arabidopsis thaliana] (TAIR:AT1G67660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62306.1); contains InterPro domain Exonuclease, phage-type; (InterPro:IPR011609); contains InterPro domain Restriction endonuclease, type II-like, core; (InterPro:IPR011335); contains InterPro domain Exonuclease, phage-type/RecB, C-terminal; (InterPro:IPR011604) Range:  from: 4734033    to: 4735386    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g13820.1    Description:  hydrolase, alpha/beta fold family protein. similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT5G39220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41871.1); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089); contains InterPro domain Alpha/beta hydrolase fold-1 (InterPro:IPR000073); contains InterPro domain Epoxide hydrolase-like; (InterPro:IPR000639) Range:  from: 4735544    to: 4737805    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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