Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        --------->AtMYB61                                               --------->ANAC46                                               --------->ANAC58     ----------->RAV1(2)                                               --------->ANAC58   --------->DEAR3(1)                                            <---------WRKY12      <---------ALFIN1                                            <---------WRKY38(1)   --------->AtMYB61                                            <---------WRKY45     --------->MYB46(3)                                           --------->PCF5      --------->AtMYB61                                         <---------MYB46(3)   --------->MYB46(3)                        <-----------GT1 --------->ALFIN1 --------->ZAT6                     <---------ICU4     <---------AtMYB61<---------ALFIN1            --------->YAB1            <---------MYB46(3) --------->AtMYB61          ------->TEIL    <----------DOF2 <---------YAB1   <---------AtMYB61------->GAMYB --------->ZAT2--------->ABI4(2)    <---------DAG2--------->YAB1     <---------DEAR3(1) --------->MYB46(3)        <-------TEIL ---------ZAT18  <---------YAB1      --------->ALFIN1 --------->ANAC46      --------->MYB52(1)   <xxx >RAV1(2)  <---------ATHB12       <---------AtMYB61  --------->MYB46(3)   --------->MYB46(3)<-------TEIL   aatgcgctttacaatcactatcattcttacaacatggaggtggtggtccacgataaccaccactaccaccacctggacaaccggtgcatcttggttcatt  4719000                 --------->ETT(2)                                             --------->ANAC58                 ----------->HVH21                                          --------->CCA1(2)                <---------WOX13(1)                                        --------->CCA1(2)              <---------MYB46(3)                                   --------->YAB1             <---------AtMYB61                                   <---------AHL20(2)   <-------TEIL<-------GAMYB <-----------GT1                     --------->AHL20(2)                -- xxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <---------YAB1          <---------CCA1(2)--------->ANAC58-------   cggcatacatgagttttggttgacagaagtttcactgttttgaatgctaattccattttctgcatatattaataagagataagaaacaaaaaaaaacata  4719100                                                                                <---------ANAC55(2)                                                                                --------->ANAC58                                                                                --------->ANAC58                                                                         <---------ANAC46                                                                         <---------ANAC58                                                                         <---------ANAC55(2)                                                                         --------->ANAC55(2)                                                                         <---------ANAC55(1)                                                         <---------AHL20(1)    --------->RAP2.6(3)                                                         --------->AHL20(1)  --------->ARR14(2)                                                         <---------ARR11(3)  <---------SPL7                                                         --------->ARR11(3)  <---------ARR14(2)      --------->YAB1                                    <---------AHL20(2)  <-----------HVH21     <---------ATHB12                               --------->AHL20(2)   <---------ANAC58   --------->WOX13(1) --------->AHL20(2)          --------->TOE2(3)     <---------LBD16 <---------ATHB12    --------->AHL20(2)        ------->TEIL            --------->MYB52(1) ------->WOX13(1)--------->AHL20(2) <----------ID1--------->TOE1(3)  <---------ANAC58  --------->DAG2 -->AHL20(1)   ----------->GT1   ---------->DOF2  <----------DOF2    <---------ANAC58 ---------->DOF2   ttaatcaatgaaaaactatgtaaataaaaaatactaaaagcacaaaatgaaactttaaatattttttgtttacttacgggttacggcaaaaagtagagaa  4719200                                                                                      <---------ARR11(3)                                                                                      --------->ARR11(3)                         <------ZmHOX2a(2)                                       <------MYB83                        <---------ARR11(3)                                       ----------->GT1                        --------->ARR11(3)                                       <------MYB46(1)                  <------ZmHOX2a(1)                                             --------->MYB46(2)                <---------TOE2(3)                                               --------->MYB59                <---------TOE1(3)                                           <---------MYB46(3)             <---------AHL20(2)     ---------->DOF2                       <-------GAMYB            --------->YAB1------>ZmHOX2a(2)             <---------ZAT14   <---------ANAC58      -----   --------->YAB1 ===============HOX2a_HOX2a        <-----------GT1       <---------ANAC58     ------  <---------ATHB12==============HOX2a_HOX2a        <-----------GT1       <---------MYB46(3)    <-----   accaataacaacaattttaaggaagcgatcttcattttcaaagtcgatgtttttttccttcactggagaagtttttggttgtttggtaaatcttgcaatg  4719300                                                                                      ------->PIF5                                                                                      <-------PIF5                                                                                      <-------MYC4                                                                                      <-------MYC2                                                                                      ------->MYC2                                                                                      ------->MYC4                                                                                      ------->MYC3                                                                                      <-------MYC3                                                                                     --------->TGA1a                                                                                     <---------TGA1a                                         <---------ZAT18                             <---------O2                                         <-----------------AGL1                      --------->O2                                  <---------YAB1                                     --------->ANAC46         --------->ARR11(3)      <---------AHL20(2)                      --------->AHL20(2)       <---------TOE1(3)         --------->AHL20(2)        --------->MYB59       <-----------GT1       <---------TOE2(3)       <---------YAB1              ----------->ARR10  <---------ICU4 ---->YAB1                   <---------AHL20(2)         =======================================MYC_MYB --->ICU4<---------ARR11(3) <---------AHL20(2)          <-------GAMYB<---------AHL20(2)            -- ----ATHB12              <---------AHL20(2)        *TSS<---------MYB46(3)<---------AHL20(2) <--------   gtgaagttgaaggtattcttcatcgatttttttatttttatagtccagtttaggcgatggttagatactattttttttaatatttacacgtggaaattga  4719400                                                                           --------->ZAT6                                                                        --------->AHL20(2)                                                                    <---------AHL20(2)                                                                    --------->AHL20(2)                                                                    <---------YAB1           ------>MYB83         <------------CBF               --------->YAB1        <---------TOE2(3)              ------>MYB46(1)       <---------YAB1                  <---------YAB1        ---------->DOF2      --------->CCA1(2)   <------------CBF                 <---------ARR11(3)      --------->AHL20(2)   --------->ARR14(2) <---------YAB1                     --------->ARR11(3)      <---------AHL20(2)   <---------ARR11(3) ------->YAB1 <---------GLK1(2) ---------->DOF2     <---------GLK1(1)   <---------AHL20(2) <---------MYB59 ----CBF--------->ATHB12  --------->MYB52(1)        --------->GLK1(1)   <---------ICU4  <-----------GT1   agtataattgttattggattcttttgactaacaacaaagttctcataaacatggaaatctaattaaagttttaattaatactagatatgtttaccaaata  4719500                       <---------RVE1(1)                               --------->ZAT14                      --------->ARR11(3)                     --------->YAB1                      <---------ARR11(3)           <---------AHL20(2)  <---------ZAT14                     <------ZmHOX2a(1)            <---------ARR11(3)   <---------ZAT18             <-                   <---------TOE2(3)              --------->AHL20(1)   --------->ZAT18           <---                 ---------->DOF2   --------->AHL20(2)   <---------ANAC58                      <------           ----------->GT1  <-----------GT1       <---------AHL20(1)<---------ANAC46          -------  ----------->GT1--------->MYB52(1)<---------AHL20(2)   <---------ANAC58        <----------DOF2------   agagttgcaaaattggaaataaaggatttttttcgatttaaatgtctatctatatatttcttatcagatttagtggactatgctttatattagatgatga  4719600     --------->ANAC58     --------->ANAC46  --------->TOE2(3)     --------->ANAC58 <---------ICU4   <---------ALFIN1   --------->YAB1 --------WRKY18(1)    --------->ATHB12                                               <---------YAB1 ------WOX13(1)      --------->ICU4               <---------ANAC55(2)      --------->YAB1 ---YAB1  <---------ARR14(2)        <---------ANAC58         ---------->DOF2      <---------AHL20(2) -->ICU4  --------->ARR14(2)        <---------ANAC58       <------ZmHOX2a(2) <---------YAB1 --->ATHB12          <---------ATHB12             --------->ANAC55(2)   ---------->DOF2             -   ttgacccacgcaaattttctaaaatcattagtccaaatgcttatgtctaaataagtattggatcaaagaaaaatcaaagatgattttatgcttaaaaaaa  4719700                                                          <-----------RAV1(1)                                                        <---------ANAC55(2)                                                        --------->ANAC55(2)                                                   <--------HAHB4                                                   --------->YAB1                                                   <---------ICU4                                                  <---------ATHB12                                                --------->WOX13(1)                <----------DOF2                                               ------>ZmHOX2a(2)            --------->ABI4(2)                                              <------ZmHOX2a(2)             ------>NtERF2                                             --------->ARR11(3)             <---------ZAT18                                             --------->AGP1             --------->ANAC58                                ======================HOX2a_HOX2a       --------->ANAC58                                <----------ID1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       <----------DOF2                                <------ZmHOX2a(1) <---------YAB1        <---------DEAR3(1)--------->TOE1(3)                                =====================HOX2a_HOX2a    --------->ANAC58      --------->TOE2(3) -------->YAB1       <---------YAB1          <---------ARR11(3)     --------->ANAC58   <-----------GT1   aaacataatttagtgaccaaaatactattgaataggaacaaaatcgagatctatcattacatgttgctacaggcacggtgccctctttataactttaaaa  4719800                                          <---------AHL20(2)                                         --------->AHL20(1)                                         <---------AHL20(1)                                         --------->AHL20(2)                     --------------->AGL15                                         <---------AHL20(2)                     <---------------AGL15                                   --------->ANAC58             --------->TOE2(3)      --------->ANAC55(2)                          <---------GLK1(2)           --------->AHL20(2)       ======================                          --------->ARR14(2)          --------->ATHB51         ------>ZmHOX2a(2)             ---------->DOF2       --------->ANAC58  <---------MYB52(1)        ----------------->AGL3         ----------->RAV1(1)<-------TEIL--------->AHL20(2)<---------AHL20(2)   ----------------->AGL2        <----------ID1    <---------ARR14(2)      ------>ZmHOX2a(2)      --------->TOE2(3)   cattttgaaaacaacaaaagattacacagattcagaaacgaaattaatttgatccattatttaaaacctctaaaaccttgatccattttaagtaatagac  4719900  Previous    Next  AGI:  At1g13755.1    Description:  contains InterPro domain Somatomedin B (InterPro:IPR001212) Range:  from: 4718670    to: 4719351    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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