Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    <---------bZIP60(2)  <---------ANAC46 ----------->STF1 --------->TGA1 --------->HVH21 -PIF5 >PIF5 -MYC3 >MYC3 -MYC2 >MYC2 --O2 ->TGA1a                                                                                           -- ->ANAC46                                                                                    -------- ->O2                                                        --------->AHL20(2)            <---------YAB1 --TGA1a                                          --------->ZAT6   <---------TOE2(3)     --------->YAB1 ->bZIP60(2)             --------->YAB1         <-----------GT1    <---------YAB1        --------->AHL20(2) ---OsbHLH66            <---------YAB1<-----------RAV1(1)    <---------AHL20(2)  ----------->GT1 ----   agtgacgttgtcgagtcgctagatttatcatattcaaattatgttgttgttaactctcccaatataaataagattacaagagattgtaaaattataaatc  4713300                                                                                          <---------AHL20(2)              --------->ICU4                                                           <---------AHL20(1)         --------->ANAC58                                                              --------->AHL20(1)         --------->ANAC55(2)                                                     ----------->GT1         --------->ANAC58                                                       <---------TOE1(3) ------->ANAC46       <---------ICU4                                            <---------TOE2(3) ->WOX13(1)   <---------ATHB12                     <-------TEIL           <---------------AGL15  <--- ----->MYB52(1)      <---------ATHB12  <-----------GT1              ----------->GT1   --------->ICU4   aacgataccataagtaatcactaatcaggtctgtcattttcttactctctatatacgtttatgtctgattttgttaatttttgaggtaatattttttttt  4713400                                                                                          <---------ANAC58                                                                                          <---------ANAC58                                                                                    <----------DOF2                                                                                    =================                                                                                   ------>ZmHOX2a(2)                                                                                 <-----------ARR10                                                                                 <---------ARR11(3)                                                                                 --------->ARR14(2)                                                              ----------->GT1    --------->ARR11(3)                                                            --------->DAG2       <---------ARR14(2)                                                            ------------------------>ANAC81                                                           --------->DAG2        ------->TEIL    ----                    ---------->ID1                        ---------->DOF2   --------->MYB52(1)  <----                   <-----------GT1                   ---------->DOF2  <----------ID1=================          <---------RVE1(1)                       <---------AHL20(2)  ----------->GT1   <-----------GT1          <---------CCA1(1)                       --------->AHL20(2)--------->DAG2<---------RVE1(1)         <---------ARR11(3)                   <---------AHL20(2)   ---------->DOF2<------ZmHOX2a(2)         --------->ARR11(3)                   --------->AHL20(1)   ==================================       <---------TOE2(3)<----------DOF2       --------->AHL20(2)   ================================== --------GT1<---------AHL20(2)               --------->AHL20(2)<----------ID1   <---------ARR14(1)   ttcgagtttgagatttttttttttctcttttacaaaaacttgtgcaaaaaaattaaaaagaaaaggggaaaaaggagaaaacggatctttttacttggga  4713500                                                                                           <---------ANAC46                                                                                           <---------ANAC58        ----------->HVH21                                                                  <---------ANAC58      <---------ANAC58                                                                 <-------MYC4      --------->bZIP60(1)                                                              <-------MYC2      <---------bZIP60(2)                                                              <-------MYC3      <---------TGA1a                                                                  ------->MYC3      --------->TGA1a                                                                  ------->MYC2      --------->O2                                                                     <-------PIF5      <---------O2                                                                     ------->MYC4      <---------bZIP60(1)                                                              ------->PIF5      ===================================bZIP_DOF                                     <--------ABF1      <---------ANAC58                                                                <---------O2      <---------ANAC46                                                                --------->ANAC55(2)  <-------MYC4                                                                        --------->TGA1a  -------->ABF1                             <---------ANAC58                          --------->bZIP60(2)  <-------MYC3                              <---------ANAC58                          <---------ANAC55(2)  ------->MYC3                          <-------MYC3                                <---------ALFIN1  <-------MYC2                          ------->MYC3                                <------------OsbHLH66  ------->MYC4                         ===================bZIP_DOF               --------->ORA47(1)  ------->MYC2                         --------->TGA1a                          --------->DREB2C(2) <--------ABF1                         --------->ANAC58                         <---------MYB55(2) --------->O2                          --------->ANAC55(2)                     --------->DEAR3(2) <---------TGA1a                       <---------ANAC55(2)            --------->ANAC58<<<<<<<<<<AtMYC2 ========================================bZIP_DOF                     --------->ANAC46--------->O2 <---------O2                          <---------O2                   --------->ANAC58<<<<<<<<<<HY5 --------->ANAC55(2)                   --------->O2                  <------NtERF2<-----------HVH21 --------->TGA1a                       --------->ANAC58             ------>NtERF2--------->ANAC46 <---------ANAC55(2)              --------->ANAC58                 --------->DEAR3(1) <<<<<<<<<<ABI5 ==========bZIP_DOF               --------->ANAC58                --------->RAP2.3(1) <---------TGA1a ------------->PIF3(1)            --------->ANAC46   --------->At4g35610    --------->MYB46(3) ------ARF1                     <-----------GT1=================================================bZIP_DOF ===============bZIP_DOF      <---------DAG2<---------ANAC46    --------->ANAC58--------->MYB46(3) ===============bZIP_DOF      <----------DOF2  ---------->DOF2  --------->ANAC58--------->DEAR3(1) ==========bZIP_DOF           ===================bZIP_DOF      --------->SPL7 --------->MYB52(1) ----   gacacgtgtcgtgacactggataactcagtcactttacgacacgtttcttgaagcagcactatggaacgccgacgtaatccaccggccacgtgtcgttca  4713600             ------>NtERF2             --------->ATERF1(1)            ------>NtERF2            <---------RAP2.3(1)            --------->RAP2.6(2)            <---------ATERF1(1)           --------->ATERF1(2)           <---------RAP2.6(2)           --------->DEAR3(1)           <---------ATERF1(2)           <---------DEAR3(1)          <---------At4g35610          --------->ATERF1(1)          <------NtERF2          --------->At4g35610             <---------CCA1(2)        <---------DEAR3(1)            <---------ANAC58 <---------ZAT2                  <---------WRKY12 --------->ZAT2                  <---------WRKY38(1)        <----------DOF2                       <-- <---------At4g35610            --------->WRKY18(1) <----------DOF2                               --- --------->At4g35610   ------>NtERF2  <---------ANAC58  <----------DOF2*TSS <----------DOF2    ------ <------NtERF2 <---------ALFIN1<-----------HVH21 <------------------------ANAC81             -------- ----->ANAC46<------NtERF2------>ZmHOX2a(1)     <----------DOF2  <<<<<<<<<TBF1    ------>ZmHOX2a(1)   ggcagctctctcggcggccacttgcctcctctcagtcaaggcctgtctctctttctttctttctttcttcttctctctcttttcctctaatgtccaaaag  4713700       <----------DOF2          --------->YAB1 ----------------------->TaNAC69(2)          ---------->ID1               --------->LBD16 -------ARR11(3)                <---------ICU4          <-----------HVH21 ------>NtERF2 ------>ARR11(3)               <---------ATHB51         ------>NtERF2   <---------LBD16 --->DAG2                <----------DOF2 --------------------->WRI1 <-----------GT1               <-- -->DOF2        <---------At4g35610<-----------GT1     --------->DEAR3(1)<---------DEAR3(1)    <-----   ggtcttcttctttgtctctgctcttcactttcaattataacctcttcgtcttcttcgccgtctctggtattaactccggcgagtttttttttttttttta  4713800                                     <---------YAB1                                  <---------YAB1                           <---------AHL20(2)                           --------->AHL20(2)                     <---------At5g28300                 <---------ARR11(3)<---------ICU4        ------->TEIL<-----------GT1--------->YAB1 --------DOF2<---------ANAC58     --------->ICU4              ----------->GT1          <<<<<<<<<TBF1 ------GT1   <---------ANAC58   --------->YAB1            ------>ZmHOX2a(2)    <-----------GT1   ctttgatatgaatttgcgagatttactgtttaattcatgatgacaattttggatttttgatcggatgtgaaattcagagtttttcattcttcttcatcat  4713900                                                                                     --------->MYB52(1)                                                                                    ---------->DOF2                                                                                 ----------->RAV1(1)                                                                           --------->At4g35610                                                                          --------->ANAC58                                      <----------DOF2                 --------->ANAC58                            <----------DOF2               --------->GLK1(2)<---------At4g35610    ---     ---------->DOF2        <---------DAG2<----------DOF2<---------GLK1(2)--------->ANAC58  ---------     XXXXXXXXXXXXXXXXXXXX>MIR415   <-----------GT1   <---------LBD16  --------->ANAC58      ---------   cttataacaaagaagaaacaaaacaaaaaactttttttttctttctttctattgtttcggaatctatgggtgaagcaagcagacaacaaagggcatggaa  4714000                                                             <---------ANAC46                                                             <---------TOE1(1)                    --------->ARR11(3)                       <---------TOE2(1)                    <---------ARR11(3)                    <---------MYB52(1)              --------->ANAC58                         ------>ZmHOX2a(2)              --------->ANAC58                        <------ZmHOX2a(2)                           <--           --------->ARR14(2)                        --------->AGP1                    --------->ALFIN1           <---------ARR14(2)                        --------->ARR14(2)               <------NtERF2          <-------GAMYB                              --------->ARR11(3)               <-------GAMYB      ------------>MYB.PH3(1)                        <---------ARR14(2)              <---------MYB46(3)      --------->MYB52(1)                            --------->GLK1(1)                <---------DEAR3(2)      ------------>AtMYB77                          <---------GLK1(1)               <---------DREB2C(2)     ----------->HVH21                          --------->LBD16                     --------->ALFIN1 -------->GT1 <----------ID1                   --------->ANAC46                     <---------DEAR3(1) >ANAC58 <---------MYB46(3)                 --------->MYB52(1)                     <---------ABI4(1) >ANAC58<---------ANAC46              >>>>>>>>>GATA-1<---------ARR11(3)        --------->MYB52(1)<---   cagagaaatgacggttacgacaaatctttctctagacatagataaatacccgagagatctgttacgaggtttcatgtctgaaaacggcggtggaagagtc  4714100                                                                         <-------TEIL                                                                        --------->ARR14(1)                                                                       --------->ARR14(2)         ---       <------NtERF2                                                   --------->ARR11(1)         ---      --------->LBD16                                                  <---------ARR14(2)         <--     <---------DEAR3(1)                                                <---------GLK1(2)          <--     <---------ANAC46                                                ----------->ARR10         ======    <---------LBD16                --------->ATHB12                 <--------P                 <-----  --------->ANAC46           <---------------AtSPL3               <---------MYB46(3)           ====== <---------LBD16          <---------YAB1                   <----------DOF2                  --------- <---------At5g28300    --------->YAB1   --------->At4g35610      ----------->GT1           --------- ---------HVH21        --------->ICU4    <---------At4g35610     --------->ALFIN1    --------->ANAC58 -------DOF2   --------->MYB52(1) <---------YAB1--------->YAB1<---------AtMYB61      --------->ANAC58   tttcacggcggagaaacaaactgcgatgatgagagtacgattgagctcaatcttggtttgtctttaggtggtagattcggagtagacaagactccgagga  4714200  Previous    Next  AGI:  At1g13740.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G69260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41856.1); contains InterPro domain Protein of unknown function DUF1675 (InterPro:IPR012463) Range:  from: 4713671    to: 4715404    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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