Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           --------->LBD16         ------>NtERF2        <---------LBD16        <---------ANAC46                                                              ----------->GT1        --------->LBD16                                                          --------->ATHB51   <---------ICU4                                                                --------->AHL20(2)   --------->YAB1                                                               --------->ICU4   <---  <---------ATHB12   --------->TOE1(3)             --------->AHL20(2)           <---------MYB52(1) -------->YAB1       --------->TOE2(3)            <---------AHL20(1)  --------->AHL20(2)         ---- --------AHL20(2)  <---------YAB1  <---------MYB52(2)   <-----------GT1    <-----------GT1       ---- ->YAB1<---------LBD16------>ZmHOX2a(1)     --------->YAB1 --------->TOE2(3)    <---------YAB1   <--- ->TOE2(3)   <---------KAN4(2)    ------>MYB83    <---------ARR11(3)  <---------AHL20(2)      ------- ->TOE1(3)<------NtERF2           ------>MYB46(1) --------->ARR11(3) --------->AHL20(2)     ---------   aataatcatgccgggaatattatccttaataaaaccaactaatctataagaatatatataacattagtgtatttaataaaccattattttgtgaaaaaat  4690000         ----------->GT1     <---------ARR11(3)     --------->ARR11(3)                                                                          <--- ------AHL20(1)                                                                                ------ ----->AHL20(1)                                                                   --------->AHL20(1) ----->ARR11(3)                                                                   <---------AHL20(1)- ------ARR11(3)                                <---------AHL20(2)                 <---------AHL20(2)< -->AHL20(2)                   --------->AHL20(2)                      <---------AHL20(2)     <------ >AHL20(2)           ----------->GT1       <---------AHL20(2)       ----------->GT1    <-----------GT1   atatcaacatcttgaaaaatttgtagttaaaaattaaaactgtttttatttaaaacaaaaacccatagattagttaattcatattatattttctatctac  4690100                         <------------CBF                        --------->ATHB12                       <---------AHL20(2)                       <---------YAB1          --------->CCA1(2)         --------->ARR14(2)         <---------ARR11(3)         <---------ARR14(2)                                                                    <----- ------ALFIN1      --------->ANAC55(2)                                                    ------>ZmHOX2a(1) -->P    <---------GLK1(2)                                                              <------------ ------>MYC3       <---------ANAC55(2)                                             <---------ICU4 -------MYC3  <---------AtLEC2               <---------YAB1       <-----------GT1 --------->ICU4 -----GT1--------->ARR11(3) <---------AHL20(2)             ----------->GT1        <---------YAB1    <   cacatgtataagatttgcattacatattattgaatttgaaaagttttattctagtcaaatatggtttatttccttctaagtgtgatcatttcctcttctt  4690200                  --------->AHL20(2)                                    ---------->DOF2        --------->At5g28300                                            <------ZmHOX2a(1)       ----------->GT1                                               <---------TOE1(3)     --------->At4g35610                                             <---------TOE2(3)     --------->ZAT2   <-----------GT1                            --------->TOE1(3)     <---------ZAT2--------->YAB1                        --------->AHL20(2)     <---------At4g35610<---------YAB1        ---------->DOF2    --------->TOE2(3) -----DOF2        <---------AHL20(2)      ---------->DOF2<---------AHL20(2) ------------ANAC81<---------ICU4   --------->ARR14(2)  --------->AHL20(2)            <---------DAG2 -----------GT1 --------->TOE2(3)   <---------ARR14(2)  <---------AHL20(2)            <----------DOF2   tttttccagctgtaaaaacattaattactatttaagaggttacccaaagaaagaagaatttaataaaccttaaggaaagtcttctaaactttttttacaa  4690300                                                                                               ------                                                                                  ---------->DOF2                                                                                 <---------WRKY38(1)                                                                                 <---------WRKY12                                                                                 <---------WRKY45                                                                                <<<<<<<<<<WRKY40                                                                                <<<<<<<<<<WRKY18                                                                                --------->WRKY18(1)                                                                                <<<<<<<<<<WRKY62                                 <-----------GT1                       <---------ARR11(3)  --------->ANAC58                    <----------DOF2                                   <---------ICU4       --------->ANAC58            --------->GLK1(2) <---------ICU4    <---------TOE2(3) <-------TEIL <-----------HVH21   --   agactccaaaaccgaatcagttctttttcaaatttttactacaagtctataacgtttgactaagaaaattcattatctcttggtcaaagcatcaagtcag  4690400                                                                           <---------ANAC58                                                                   <----------DOF2                                                                <---------ARR11(3)                                                           <------NtERF2   <---------ANAC58                                  <---------ICU4           --------->At4g35610   --------->SPL7    --                                  --------->ATHB51        ----------->RAV1(1)  <---------SPL7      <-                               --------->YAB1             --------->RAP2.6(2) <---------ANAC46    ---                             ------>NtERF2             --------->LBD16  ---------->ID1            --- ----->GT1             <----------DOF2                --------->ANAC46<---------MYB46(3)        <---- ---------->CBF <---------GLK1(2)--------->ICU4      <---------LBD16  <-----------RAV1(1)     -------   taacaatggccagtttcaaattcttctttgcagccataattttggttctgtttcatccggcagcaataacttttgttgcttcgtatggctcattacaggt  4690500             --------->AHL20(2)     --------->At4g35610                                        --------->ANAC58     <---------At4g35610                                        --------->ANAC58   --------->REM1(1)                                       ---------->DOF2 ------->At4g35610  <---------DAG2                      <------ZmHOX2a(2)              --------->YAB1 --------At4g35610  <----------DOF2                     --------->CCA1(2)         <---------ARR11(3) ------>ANAC58   <---------AHL20(2)                    --------->AGP1--------->AtLEC2 <-------TEIL ------>ANAC58   <-----------GT1              <---------ALFIN1---------->DOF2     --------->ARR11(3) ----P       <---------AHL20(2)   ---------->DOF2      <---------ARR11(3) --------->ARR14(2) -->ANAC46  <---------AHL20(2) --------->TOE2(3)       --------->ARR11(3) <---------ARR14(2)   aagctacagctaaaattatttacttttcaattttcttaaaggctatttccaccttgagatccaaagaagccatgcgaattctgagatattcatcaaaaat  4690600                                                                                               ------                                                                                               <-----                                                                              --------->ARR14(2)                             --------->YAB1                        <-----------GT1    --------->TOE2(3)                    ------->TEIL                         <---------YAB1       <---------GLK1(2)------                    <---------ARR11(1)                 --------->YAB1        ========================                   <---------GLK1(2)               --------->ARR11(3)        <------ZmHOX2a(1) <-----                   <---------CCA1(2)      <---------RVE1(1)    <---------TOE2(3)     --------->REM1(1)      --------->ANAC46       <-----------GT1       <---------ARR11(3)      <---------TOE2(3)  -------   tttcttcgacgaaatcaactcgaatctctattcacaatttagcgatatttagggatattatcatttatgttacaatttaggattcttacatcaatgcagc  4690700                               <-----------RAV1(1)                  --------->SPL7                ----------->HVH21    <------ZmHOX2a(2)      <---------ZAT14                                    <---------MYB52(1) --->At4g35610  <---------SPL7 --------->ICU4         <---------LBD16       <---------ANAC58 ----ZAT2      --------->TOE2(1)                 <---------AHL20(2)         <---------ANAC58 --->ZAT2      --------->TOE1(1)            <---------MYB46(3)  <-----------RAV1(1) ==========HOX2a_HOX2a     --------->ZAT14<-------GAMYB <---------ANAC46   <-------TEIL  <---------ARR11(3) ----At4g35610--------->At4g35610         <---------ANAC58      <---------REM1(1)  <------ZmHOX2a(2) >TEIL        <---------At4g35610         <---------ANAC58     --------->ARR11(3) --------->AGP1 <---   ttggcgatcaatgctcatcggacgaagactgcaatgttggacttggttgttttaaatgcggtatagatgttgcaagatgcgttagatccaatatcacaga  4690800                                                                                    <---------AHL20(2)                                                                                   --------->AHL20(1)                                                                                   <---------AHL20(1)                                                              <---------AHL20(2)  <---------AHL20(2)                       <-----------GT1                    ----------->GT1      <---------AHL20(1)                   --------->YAB1                       <---------ANAC46       --------->AHL20(1)                ----------->GT1                        --------->ALFIN1   --------->AHL20(2)             <-------GAMYB                      <---------AHL20(2)  <---------AHL20(2)            <---------MYB46(3)                 --------->AHL20(2)   --------->AHL20(2)    <---------ANAC46           <---------TOE2(3)              <----------DOF2 <---------ANAC46<---------AHL20(2) ---ZmHOX2a(2)<--------P     <----------DOF2  <---------YAB1  --------->AHL20(2)--------->AHL20(2)   tcagttctccattgtggttagtaataaacaacttttgaatcaaactttattaaaaatgtggtgtttaaatataaattttaatatatatatttgagtgaaa  4690900  Previous    Next  AGI:  At1g13680.1    Description:  phospholipase C. similar to phospholipase C [Arabidopsis thaliana] (TAIR:AT4G36945.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49201.1); contains InterPro domain Phospholipase C, phosphatidylinositol-specific , X region; (InterPro:IPR000909) Range:  from: 4690406    to: 4692838    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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