Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                 ----                                                                                                 <---                                                                                                <----                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              <------                                           <---------MYB52(1)                                 -------                                          --------->LBD16  ---------->DOF2                    <------                                         --------->HSFB2a(2)                                  <------                                         <---------HSFB2a(2)    <---------AHL20(2)           <-------          <---------ANAC58            <---------ARR14(2)--------->ANAC58                     --------          <---------ANAC58            --------->ARR14(2)--------->ANAC46                  --------->AHL20(2)          --------->ANAC55(2)      --------->AHL20(2)   --------->AtLEC2                  <---------AHL20(2)         ------->TEIL           --------->ATHB12<---------AHL20(2)                    <---------AHL20(2) --------GT1             --------->ZAT6 <---------LBD16 --------->ANAC58              --------->AHL20(2) --AHL20(2) ----------->GT1    --------->ICU4----------->GT1 ----------->GT1<-----------GT1  <-------   ttctgcatttgtacgtgttaaaaactgccactagtgattaaatccggaagttaatttcaggcaaagttaatttagttttttccaccaattttttaattat  4662300    <---------YAB1 ------>AHL20(2) -------AHL20(1) -------AHL20(2) ------>AHL20(1) ----->AHL20(2) ------AHL20(2) -----YAB1 -->YAB1 ->ATHB1 ->HAHB4 --HAHB4                                   <---------RVE1(1) -->ATHB51                                 <---------CCA1(1)                               --------->AHL20(2) ---AHL20(2)                     --------->DAG2                                            <---------AHL20(2) ---ICU4 ----------->GT1        ---------->DOF2                                        <---------AHL20(2) --ATHB51<------MYB46(1)     <------ZmHOX2a(1)             <---------ICU4              --------->AHL20(2) ->ICU4  <------MYB83--------->YAB1       --------->ARR11(3)      <----------DOF2--------->At4g35610 --YAB1 --------->MYB59--------->ZAT6     <---------ARR11(3)<---------ANAC55(2)  <---------At4g35610-   taaattgtgtttggttatatgaataatactaggaaaaagtatgagatatttttgcccttaataagtgtcttttttaaaaaaacagcttattaattaatga  4662400                  --------->ANAC46                  --------->ANAC58           --------->TOE1(3)           --------->TOE2(3)           --------->YAB1         <---------ARR11(3)                                                     <---------DAG2         --------->ARR11(3)                                <---------ZAT6       <----------DOF2        <---------CCA1(2)                       ------>ZmHOX2a(1)<---------ARR11(3)    ----------->GT1             <---------AHL20(2)  <---------ATHB12        <---------WRKY12   <---------TOE2(3)            <-----------GT1--------------->AGL15        <---------WRKY38(1) <---------AHL20(2)  <-------TEIL              --------->TOE2(3) --------->ARR11(3) -------->AHL20(2)--------->ANAC58             <---------------AGL15   --------->At4g35610   catttaatgtaaatcttaacacgtccataactatttacttaaaaatgttcctcaataagtagtattagatattagcagtcaacttttcacaaaaaaaaaa  4662500                                                                                    <---------CCA1(1)             <---------YAB1                                                         <---------RVE1(1)          <---------YAB1                                                           <---------ARR11(3)          <---------AHL20(2)                                                       --------->ARR11(3)          --------->ICU4                                                          --------->YAB1        <---------RVE1(1)                                                        <---------YAB1        <---------CCA1(1)       --------->ARR11(3)                   <---------WRKY38(1) <---------YAB1       --------->AHL20(1)       <---------ARR11(3)              <---------YAB1--------->ICU4       <---------ARR11(3)   ---------->DOF2                  --------->AHL20(2)--------->YAB1       --------->ARR11(3)  --------->AHL20(2)                <---------AHL20(2)<---------ICU4   <----   ---------->DOF2<---------WRKY38(1)                        <---------YAB1 --------->YAB1     <-----   aaaaaaaaagatattattagtcaacaaaataaaagatttgtttagtcaaaaacaaaactccatattattagtcaacaaaaattatgatattttcatttat  4662600                                                                                    <---------AHL20(2)        <---------TOE2(3)                   ----------->GT1                         --------->AHL20(2)     <---------YAB1                      --------->MYB52(1)             <---------ICU4   --------------->AGL15             --------->AHL20(2)              --------->YAB1 ----------->TBP  <---------YAB1                    --------->AHL20(2)               ------->GAMYB----------->TBP -----YAB1                      <---------ATHB12     --------->MYB46(3) --------->YAB1 ----TOE2(3)       <-----------TBP--------->TOE2(3)<-----------GT1  --------->MYB46(3)<---------AHL20(2)   gtttactattaatgtatacagatttatagttccaaacattaaaaaacagataaaaaccactctctacttaaccatcatgcccctatatatatatgttttg  4662700                                                  --------->AHL20(2)                  *TSS                          --------->AHL20(2)                 --------->ZAT14               --------->YAB1            <---------ZAT14              ------>MYB46(1)         <---------ANAC46                ------>MYB83                                --------->GLK1(2)       <---------ANAC46                <---------MYB59                        ------->GAMYB    <----------DOF2                 --------->ANAC46   <-------TEIL        ----------->RAV1(1)   ttctgtcttttgtgtatactatacactaatttcattacaaaccaaactaaaataatatacatcgttcatttcatattcaacagaaggaatcggttttaaa  4662800                               <---------ICU4                                                       <                              --------->ICU4                                                   ------                         <---------ANAC55(2)         <---------ANAC58                          ------                         --------->ANAC46          <---------MYB52(1)                          ------                         --------->ANAC55(2)       <---------ARR14(2)                        <-------                    --------->TOE1(3)             <---------RAP2.6(3)                      --------->DOF5.7(2)                    --------->TOE2(3)            <---------MYB46(3)    ----------->GT1   --------->TOE2(3)     <----------ID1<---------HSFB2a(1)    --------->ATHB12  <---------ZAT14 --------->ICU4<----------DOF2     ----------->GT1--------->AtMYB61    <---------YAB1     <---------REM1(2)       <----------DOF2 - ---------->DOF2--------->MYB46(3)     <---------ZAT6<---------ANAC58<---------ANAC46 <-----------GT1   actcaaagagaaaaatgaacaaccttcgcgtaattatgtcagtgttattggccgttcttgtcttcacagcgactggtaattagtttctttacctttaacg  4662900         <---------At4g35610         --------->At4g35610         <------NtERF2        --------->RAP2.6(2)       <---------DEAR3(1)     <---------SPL7    ------>ZmHOX2a(2) --------->ATHB12                                                          --------->At4g35610 --------->YAB1                                                            <---------ZAT14        --- ---------ATHB12                   <---------WOX13(1)         <---------TOE1(2)   --------->ARR14(2) --->ANAC58                     <---------YAB1            <---------HSFB2a(2)     <---------ARR14(2) --->ANAC58                     <---------AHL20(2)        --------->HSFB2a(2)    <------ZmHOX2a(1)<-- --->ANAC46            <---------At5g28300           <<<<<<<<<TBF1         <---------At4g35610   <--- --DOF5.7(2)          --------->MYB52(1)        <----------DOF2       <---------GLK1(2)        ------ -------->ICU4        <-----------GT1           --------------------->WRI1 --------->ZAT14    <------   caatgatcggccgctctaaacaattaacagtgttttaattgaattgttctctttcttcttctcgcagtttcagagtctgcagaggaaatggggaagggtg  4663000                                                            <---------ANAC58 ------>bZIP60(1)                                           <---------ANAC58 -------bZIP60(1)                                  <---------ANAC46                  <---------TOE2(3) ------AtMYB61                                     <---------ANAC58                 --------->DAG2 --->ALFIN1                                        <---------ANAC58                ---------->DOF2 -----HVH21       <-------TEIL          ---------->DOF2----------->HVH21 <---------------------WRI1   aggtcacaatctcacttagatgcaaaacgaaaacagaatgcttaaagaacattgcctgtgaagcttgtgtcgattgtcgatgcgataaaggaatttgtaa  4663100                               ------>MYB83                               ------>MYB46(1)                                                  -----                        --------->MYB46(3)                                                      <----                       ------>MYB83                                                    ---------->DOF2                       ------>MYB46(1)                                      <---------------AGL15                    --------->MYB46(3)                                  <---------AHL20(2)     ------             --------->At4g35610                                    <----------DOF2----------->GT1             <---------At4g35610                                <----------DOF2--------->AHL20(2)           --------->ANAC46    -------->P            ------>ZmHOX2a(1)  --------->AHL20(2) --------->AHL20(2)   atgccatggtttcacagcagaaaccaacaatccaaccgtttaactcatatttctcctaaatgttttctttcttttttaatataaaatgtaaaagaaaata  4663200  Previous    Next  AGI:  At1g13609.1    Description:  Encodes a defensin-like (DEFL) family protein. Range:  from: 4662718    to: 4663189    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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