Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               --------->ANAC46                                          <---------WRKY12                                         --------->DOF5.7(2)                                     ----           <---------At4g35610          --------->TOE2(3)                                        ----           <-------GAMYB                <-----------HVH21                                       -----    --------->ARR11(3)                 --------->ANAC46                                 --------->HSFB2a(2)    <---------AHL20(1)                 --------->ANAC58                                 <------------    <---------ARR11(3)                 --------->ANAC58                             <----------DOF2--    <---------ICU4                <---------YAB1                        ----------->GT1 <---------HSFB2a(2)    --------->AHL20(1)           --------->AHL20(2)                    <----------ID1   --------->HSFC1(1)  <---------AHL20(1)             --------->AHL20(1)                   --------->RAP2.6(3)--------->ANAC46 ------>YAB1                --------->AHL20(2)------->GAMYB<---------AHL20(2) --------->YAB1  ------- -->AHL20(2)              <---------TOE2(3)<---------DOF5.7(2)       --------->MYB52(1) <---------HSFC1(1)   acataatattttcagttgataaactactaatgaaatattatacgtcaacgaaatttagtatataaactacaaaacggcaaaaatagctttctcgaaacca  4661300                                                                             <-----------------AGL1                                                                             <-----------------AGL3                                                                             <-----------------AGL2                                                                    --------->ANAC46                                                                    ------->GAMYB                                                                    --------->At1g77200                                                                    ----------->HVH21                                                                   <------------AtMYB77                                                                   --------->MYB46(3)                                                                   --------->DEAR3(2)                                                                 --------->MYB52(1)                                                              <---------ANAC55(2)                                                              --------->ANAC46                                                              --------->ANAC55(2)                                                              --------->ANAC58<---------------AGL15                                                              --------->ANAC55(1)                                                              --------->bZIP60(2)    <---------AHL20(2)                                        --------->ANAC58--------------->AGL15 ----------->GT1                                              --------->O2<----------DOF2 -->MYB83<----------ID1                        <---------ARR11(3)--------->ARR14(2) -->MYB46(1)                                   --------->ARR11(3)<---------ARR14(2) ------>RAV1(1) --------->ANAC58               <---------GLK1(2)----------->HVH21<----------DOF2 ---------WRI1  --------->ANAC58   --------->ANAC58        --------->MYB46(3)<-----------------AG -------->DOF2  <----------ID1     --------->ANAC58   --------->TOE2(3)<---------ALFIN1 -->MYB46(3)  --------->MYB52(1) ---------->DOF2 ----------------------->TaNAC69(2)                <-   acaaagttaattggacaaacgacaaaaaaactcacaaaagccatagatagatttttcattaaccacgtaaccgacactttcttcttttgggataaatcta  4661400                                                                        --------->ANAC58                                                                        --------->ANAC55(2)                                         --------->AHL20(2)             --------->ANAC55(1)                  --------->GLK1(2)    <---------TOE2(3)                --------->YAB1         --------->ANAC58           --------->AHL20(2)                  ----------->GT1         --------->ANAC46     --------->TOE2(3)                         --------->ANAC58         --------->ANAC58     <---------DAG2           <---------AHL20(2)                           <       ---------->DOF2   <------ZmHOX2a(1)            --------->AHL20(2)--------->ANAC46           -- --------AHL20(2)<---------GLK1(2)  <---------AHL20(2)<---------AHL20(2)<---------ANAC55(2)    <-----   tttttttttaaaagccatagattcttaggacaccttattttaatgaattatctaaatttaatcggacattacaaacgtaacatatacttacatatgcgtt  4661500                                                                                 <------------CBF                                                                                --------->ATHB51                                                                                -------->ATHB1                                       ------->GAMYB                            --------->YAB1                                      --------->ANAC58                         <---------YAB1                                      --------->ANAC58                      <---------------AGL15          <------------CBF            <---------MYB52(2)                    --------------->AGL15 <--    --------->YAB1          <---------YAB1      <---------HSFB2a(2)      <-----------GT1          <--  <---------TOE2(3)       <---------ICU4        --------->HSFB2a(2)  <---------AHL20(2)          ---- ---------AHL20(2)       <---------ATHB12   <----------DOF2          ----------->TBP             <--- ------->AHL20(2)  ----------->GT1  --------->MYB52(1)               --------->AHL20(2)     --------- ----MYB52(1)    ---------->DOF2 --------->ANAC46                  ----------->TBP<---------YAB1 ----   atttaatgaaaacattgacaaaagtaaatcattttaggcaacgaaactttctggaccccagaatgctctatatatatacctattattgtagtcttccaat  4661600  <-----------GT1                                                                                  <- -------AHL20(2)                                               --------->ARR11(3)                  -- -------YAB1                                              <---------MYB52(1)                   <----- ----->YAB1                                      --------->ANAC58                             ------- ------AHL20(1)                                  --------->ANAC46                           --------- --->CBF                                         --------->ANAC58              ------------>CBF------ ----->AHL20(2)                                --------->MYB52(1)    <------ZmHOX2a(1)    <---------MYB46(2)   attattacatcgcaaactaagctatagttattcagacctcaaattctacaaacgaaatcggttaagagctaggagaaaatgagcaatcttcgcctaacca  4661700                        <---------ZAT14 --------ZAT14          <---------REM1(2) ------->ZAT14          --------->ZAT14 ----ICU4     <---------At4g35610                                                        <----------- -->MYB46(3)  <------NtERF2           <---------ANAC58                                   ------------ >MYB52(1)   --------->RAP2.6(2)      <---------ANAC58         --------->TOE2(3)        <---------ANAC46 --->ATHB12 <---------RAP2.6(2)       <---------ANAC46  <----------DOF2       <----------DOF2     <--   ttgcagtgtttttggccgctcttgtcttcactgcgacttagcttgtacttagttttttcttttaatctcaaattgaatttctttattgtttcttatacaa  4661800                                                  --------->ANAC58        --------->YAB1                      --------->ATHB12            --------->ANAC58        --------->AHL20(2)                     <---------YAB1         <---------MYB46(3)           <<<<<<<<<ARR2                     <---------AHL20(2)     <---------ANAC46        ----------->RAV1(1) ----AGL15       <---------DAG2            <---------AtMYB61        --------->RAP2.6(2)       <------ --->AGL15    <-----------GT1              --------->ALFIN1        --------->ZAT18       ---------->DOF2 -------ARR11(3) <----------DOF2         <-----------RAV1(1)---------->DOF2         --------->AtLEC2   gaactgtgttttgaataaacttttttattggcagtttcaaactctgtggtggaagccaaggggaaagaggccacaatcaaattttcatgcaaaaagaatt  4661900                                                                                                    <                                                                                                  ---                                                                                                  ===                                                                                             --------                         <---------YAB1                       <---------AHL20(2)             <-------                  <---------ANAC58  <---------ICU4          <---------ANAC55(2)          ----------->GT1                  <---------ANAC46 <---------YAB1      <------ZmHOX2a(1)                ----------->GT1                  <---------ANAC58 --------->ICU4    <---------TOE2(3)                ---------->DOF2 ---ARR14(2) <---------ICU4 <----------DOF2        ---------->DOF2           <---------AtMYB61    <--   cggactgttttacaaacattgcttgttatgctttgtactgattaccgatgtgataaaggattatgtaaatgccatggttttggtggagaaaaggaaaatc  4662000       ----------->RAV1(1)       ------>NtERF2      --------->ANAC58      --------->ANAC46      --------->ANAC58    <---------ATERF1(1)  --------->At4g35610  <---------At4g35610  --------->ZAT2  =================RAV                                                                         ======  <---------ZAT2                                                                               <-----  ----------->RAV1(2)                                                                        <------- ---------ALFIN1                              <-----------GT1                                -------- -------->RAV1(1)                            <---------AHL20(2)          ----------->GT1<---------GLK1(1) =============RAV                       --------->AHL20(2) <---------ANAC46            --------->ARR11(3) ->HSFB2a(1)                            <---------AHL20(2) <---------ANAC58     --------->AHL20(2) --HSFB2a(1)              <-----------GT1<---------AHL20(2)<---------ANAC58     <---------AHL20(2) -------ALFIN1     <----------DOF2 <----------DOF2<----------DOF2 --------->AtLEC2     <---------ARR11(3)   ccacagctgcgccattaactgcttaatttctccatttcttttttaaatttatcttttgttttcttgtaatgcaaatggataattaaaaagatttcagatc  4662100                         <---------ICU4                        <---------ATHB12                 <---------YAB1                --------->AHL20(1)                                              <---------bZIP60(1)               <---------ICU4                                                   --------->bZIP60(1)               <---------AHL20(2)                                             --------->YAB1               --------->ATHB51    <-----------GT1                         <---------ICU4               --------->AHL20(2) <---------AHL20(2)                       --------->YAB1           --------->AHL20(2)<---------AHL20(1)                         --------->YAB1           <---------AHL20(2)--------->AHL20(1)                       --------->AHL20(1)        ------>ZmHOX2a(1)--------->YAB1                               --------->AHL20(2)   <---------CCA1(2)--------->AHL20(2)                  <----------DOF2<---------AHL20(2) --------->AHL20(2)<---------AHL20(2)                   ------>ZmHOX2a(1) --------->ICU4 ==============HOX2a_HOX2a   --------->AHL20(2)       ------>ZmHOX2a(2)<---------YAB1 -ZmHOX2a(2)  --------->ICU4 <---------AHL20(2)     <---------ARR11(3)<---------AHL20(1) --At4g35610<---------ICU4  --------->AHL20(2)   <---------WOX13(1)--------->AHL20(2)            <--- ->At4g35610--------->YAB1 <---------YAB1 <---------CCA1(2)      --------->AHL20(2)          <-------   aaattatatcctattaattattttaaatcattatattttatctcatctctgcttgatccttttacataaaaatataataatcacatcatccatatttttt  4662200  Previous    Next  AGI:  At1g13607.1    Description:  Encodes a defensin-like (DEFL) family protein. Range:  from: 4660775    to: 4661215    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g13608.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G13609.1) Range:  from: 4661679    to: 4662026    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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