Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           --------->TOE2(3)                                                                       <---------ARR11(3)                                                                      --------->CCA1(1)                                                                      <---------GLK1(1)                                                                      --------->GLK1(1)                                                                      <---------RVE1(1)                                                                      --------->RVE1(1)                                                                      <---------CCA1(1)                                                                     <---------ARR11(3)                       <---------AHL20(2)                            --------->ARR11(3)                       --------->AHL20(2)                       ------>MYB83 --------P        --------->LBD16                            --------->MYB46(3) -------->GT1    --------->RAP2.6(2)       <---------HSFB2a(2)  -------->P                      <---- ----MYB83  ---------->DOF2                --------->HSFB2a(2)  ------>MYB46(1)                ------ ----MYB46(1) --------->ANAC46  --------->ALFIN1      <------ZmHOX2a(2)--------->ARR11(3)      <-----   tggtaagaattcatagaagccgcatttatatgaagaggggctagtctagaagacggatcaaaaaccaacaagatatcttaacatactgtttgaaaaatta  4658100    ----------->GT1    <------MYB46(1)    <------MYB83   <---------TOE1(2)                                                             <---------ICU4   --------->MYB59                                                               --------->YAB1   --------->MYB111(1)                                                          --------->ICU4  <--------P                                                                  --------->TOE2(3) -----AHL20(2)                                                                --------->YAB1 --->AHL20(2)   <----------DOF2        --------->ANAC58                      <---------YAB1 ----AHL20(2)------>ZmHOX2a(1)         --------->ANAC58                    <-----------GT1          <   aatggtaggttactcctactttgactcccttacatactaacaagtaagtcaacattcaatttcaaaatcacactgtattaccataatgacggtccaagat  4658200                                                    <------MYB83                                                    <------MYB46(1)                                                  <---------WOX13(1)              ------->TEIL     <-----------GT1 <---------YAB1--------->DAG2                    xxxxxx           <---------YAB1     --------->AHL20(2)--------->ATHB12                              <xxxxxx    <-----------GT1    ------->TEIL    ---------->DOF2      ---------->DOF2          ---------->DOF2 ----------DOF2     <---------YAB1--------->AHL20(2)----------->GT1           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   agcttttaaacttatgaaacttatgaatgcaattaactaaataaagggtttgattggtaacaaaaagctgtataagttttttagttgtaaagctgttaga  4658300                                                                                   xxxxxxxxxxxxxxxxxx                                                                                  <-----------HVH21                                                                                 ------->GAMYB                                                                                 xxxxxxxxxxxxxxxxxx>smallRNA(si3)               --------------->AtSPL8                                           <------------AtMYB77               <---------------AtSPL8                                      <------MYB83            --------->DAG2                                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           ---------->DOF2  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  --------------->AtSPL3 --------->AHL20(2)              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <-  --------------->AtSPL8 --------->AHL20(1)             <---------YAB1     <------MYB46(1)      ----- <---------At4g35610     <---------AHL20(2)          <----------DOF2     <---------WOX13(1)    ------ --------->At4g35610    --------->AHL20(2)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)    ----------- xxxxxxxxxxxxxxxxx>smallRNA(si3) ----------->GT1--------->YAB1         --------->ATHB12   <xxxxxxxxxx xxxxxxxxxxxxxxxxsmallRNA(i2)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------YAB1    xxxxxxxxxxxxx   atgagctgtacaataaagctgtacaaaaaaattaagagtaaaactttctataatgcttttgatagagtttttgtgattggtaactgtcaaacctgtaaaa  4658400                 --------->ATHB12                 -------->ATHB1                 -------->HAHB4                 <---------ICU4                 <---------AHL20(2)                 --------->ATHB51                --------->ICU4                                                    --------->AHL20(2)              --------->YAB1                                          <---------AHL20(2)              <---------ICU4                                          --------->AHL20(1)             --------->ICU4                                           --------->AHL20(2)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                <---------AHL20(1) <---------ZAT14<---------ATHB51       <---------ANAC58              --------->AHL20(2) --------->ZAT14<---------YAB1         <---------ANAC58              <---------AHL20(2) xxxxx>smallRNA(fl3)                   --------->ANAC55(2)        <---------AHL20(2)        --------- --------------AtSPL3                  <---------ANAC55(2)       --------->AHL20(1)         ========= ---->DAG2   <---------YAB1    --------->ANAC58                  <---------AHL20(1)         <-------- ---->DOF2 --------->YAB1      --------->ANAC58                  --------->AHL20(2)      <-----------GT1 >GT1     <---------YAB1--------->WOX13(1)     <----------DOF2   <---------AHL20(2)   <---------ICU4 xxxxxxsmallRNA(i)    <---------YAB1<---------ATHB12       <---------MYB59 <---------AHL20(2) ------- xxxxxxxxxx>smallRNA(fl3)--------->AtLEC2  <---------GLK1(2)    --------->AHL20(2)<---------AHL20(2)   agctgtactgctatgataattattgtcattcaaacccaattacttgattcttttgttcttaccaaaattaattttattttttttttaatttttactacaa  4658500                                                <---------AHL20(2)                                               <---------AHL20(1)                                               --------->AHL20(1)                                   <                                               <---------AHL20(2)                                   <                                          <---------ARR11(3)                                <--------   ---------->DOF2                 *TSS ----------->GT1                                     ---------  <---------WRKY45            <---------------AGL15                                      --------->AHL20(2) ------>AGL15             ------>ZmHOX2a(1)    --------->AHL20(2)     <---------YAB1     <---------AHL20(2) =============================================MADS_MADS         --------->AHL20(2)      <---------AHL20(2) -------AGL15        <----------DOF2   <------ZmHOX2a(1)        <---------AHL20(2)      --------->AHL20(2) ---->TBP   ------------>CBF  --------------->AGL15            --------->AHL20(2)       --------->YAB1   atagtcaaagtttttgcaataagctttcctctctatatagaggagataatttattcacatcgaaattttattcccattgcaaagacttaattaaaatcta  4658600                                                      --------->ANAC55(2)                          <-                                                      --------->ANAC55(1)                         ---                                                      <---------ANAC55(2)                      <----- ---------ANAC58                          <---------ANAC46                            <-----------GT1 ---------ANAC58                         <---------ZAT2                              --------->CCA1(1) -ARR11(3)                               <---------At4g35610 --------->ANAC46 ----------->GT1  <----- >ARR11(3) <----------DOF2       <---------YAB1       --------->ANAC46  <----------DOF2       <------   tggcgagacttatctttcattttgtatttgctcttatccttgcagcttgtaagaatacgttacacataccatagctttgaatgtgaaatatccattttac  4658700                                                                                                -----                                                                                      <---------ANAC58      ----------->RAV1(1)    <----------DOF2                                          <---------ANAC58 --------->SPL7             <XXXXXXXXXXXXXXXXXXXXMIR2111A/B                        --------->ARR14(2) ----------HVH21         <-----------GT1            --------->DOF5.7(2)            <---------ARR14(2) ------>ANAC46          <---------AHL20(2)          --------->At5g28300           --------->MYB46(3) ------GT1          --------->AHL20(1)             <---------DEAR3(2)            --------->ANAC58 ------------AGL1   --------->AHL20(2)            --------->ETT(1)               --------->ANAC58  -- -----GT1           <---------AHL20(2)   <---------ARR14(2)               <------ZmHOX2a(1)<---------   ccgtctggcaacatttactaaattttttaatcttttggatgcagatttattgtcggtaactgatgcgatacctagaggatggcaagaaccgtgcttttgt  4658800                                                                                                   --                                                                                                  <--                                                                                                 ----                                                                                        <---------ANAC58                                                                                        <---------ANAC58                                                                                       <---------ZAT18           ------>ZmHOX2a(1)     ==================HOX2a_HOX2a                        --------->ALFIN1           =============================HOX2a_HOX2a                                  --------->ZAT14         <---------ICU4          ------>ZmHOX2a(2)                                   <---------ZAT18       --------->ARR11(3)      <---------ARR11(3)                               <---------ZAT14<-----  <---------HSFB2a(2)          --------->ARR11(3)       --------->ATHB12        <---------At4g35610--  --------->HSFB2a(2)  --------->ALFIN1            <---------ZAT14              --------->ZAT14<----- ----->ID1--------->TOE2(3)  ----------->ARR10     --------->ZAT14        --------->ATHB51 <-------GAMYB ---->ZmHOX2a(1)     <-----------RAV1(1)<---------ARR11(3)               <---------YAB1--------->ZAT18 -DOF2 <---------ARR11(3) <---------ANAC46  ------>ZmHOX2a(1)    ------>ZmHOX2a(1)  --------->ALFIN1   ccttccaaaaatccttactgcgactgtggcgatgatcttcaagttcctactacttcagtgattagtcctaaacctataattgagcagtgtgcgcgttgcg  4658900                                  ------->MYC2                                  ------->MYC3 <---------GLK1(2)        <---------LBD16 ------->ANAC58       <---------------AtSPL3                                       --------->ANAC46 -------------------WRI1  --------->SPL7                                   --------->ZAT18 ------>DOF2  ----------->RAV1(1) <-------MYC2                             <---------ZAT14 ----ANAC58  <----------ID1       <-------MYC3            <---------AHL20(2)--------------->AtSPL3 ------->ANAC58  ---------->DOF2 <---------ANAC46        --------->AHL20(2)--------->ZAT14       ---- ----ANAC58--------->AtLEC2 --------->LBD16 ---------->DOF2        --------->TOE1(2)<-----------HVH21   aaagaaactctcaatgcaacaaagtttgtccggcaacgtgcaaatacaaagtctgtatatttaatcgaacatgtgagttcagtacatgtcattgctatag  4659000  Previous    Next  AGI:  At1g13605.1    Description:  methyltransferase Range:  from: 4658535    to: 4659103    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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