Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    ------>ZmHOX2a(1)                                                          --------->YAB1                            -                  <---------YAB1                          <---------ICU4                            -                <---------ICU4                           <---------ATHB12   <----------DOF2     -----       ----------->GT1                            --------->At4g35610      <---------DAG2       -----      --------->DAG2                         <----------DOF2     --------->TOE2(3)         <---------At4g35610    ---------->DOF2                      <---------GLK1(2)-------->ATHB1 ------->TEIL      --------->At4g35610 -->DOF2       <---------ATHB12 --------->YAB1    <---------At4g35610  <---------ZAT18<----------DOF2   tataagaaaaggtataaatcattcttcacatttatcaaaaatagatactttcagctacaatcattctccttagtgaaccttttctatacttttagctgaa  4646500                                                                 <---------ARR11(3)                                                                 --------->ARR11(3)                                                                 --------->ARR14(2)                                                                 <---------ARR14(2)                                                           --------->ANAC58                                                           --------->ANAC46                                                           --------->ANAC58                                                          ------->GAMYB                                           --------->ANAC55(2) --------->ANAC58      <---------AHL20(2)                   <---------ANAC55(2) --------->ANAC58      --------->AHL20(2)            --------->YAB1       <---------ALFIN1                        ---- -------->ANAC58                    <--------HAHB4     ----------->RAV1(1)            <----------DOF2 -------->ANAC58    --------->YAB1  <---------ICU4  --------->ANAC58              --------->MYB46(3) ---->ANAC58       --------->ICU4  <---------ATHB12 --------->ANAC46     --------->AHL20(2)      ---- ---->ANAC58 <---------TOE2(3)   --------->WOX13(1) --------->ANAC58     <---------AHL20(2)<------ZmHOX2a(1)   gcaaacaattaaactaaggcattgatgaaacaaaacaatcattttaagtaacttaagcaacacacaagatactatataaatctaacaactttaggagaca  4646600                                                                                                 ----                                                                                                 ----                                                                                             <-------                                                                                             --------                                                                                             --------                                --------->GLK1(2)                                            --------                                <---------ARR11(1)                                          ---------   --------->YAB1               ------->TEIL  --------->GLK1(1)                     <---------ARR11(3) ----->ANAC58               <---------------------WRI1                              --------->ARR11(3) ----->ANAC58     <-----------GT1         <------ZmHOX2a(1)                     <------ZmHOX2a(1)<---   cactatcacaaaacttcatattacctcgaagacgaatctatcgaggagaaatcgaatcgaagggaagaacacagcgaagagaggaagaactcgaaaatcc  4646700      --------->LBD16    <---------LBD16 -->ZmHOX2a(1)                                                 --------->LBD16 ----->LBD16                                                  --------->ANAC46 --ARR14(2)                                        ------->GAMYB ->ARR14(2)                                       --------->MYB46(3)--------->ARR14(2) ->ARR11(3)                           <-----------GT1        <---------LBD16<----------DOF2 ->GLK1(2)     <-------TEIL      --------->ATHB12 <---------MYB52(2)<---------ARR14(2) >GLK1(1)<---------At4g35610   <---------WOX13(1) <---------MYB111(2)   ------>ZmHOX2a(1)          <- ------YAB1<---------YAB1    --------->ATHB12     <---------MYB55(2)--------->ARR11(3) <---------GLK1(2)   tgataaaccggagatgattcatgttcccagttgattgatttcaccgattccaacaaacccatctccgtaaaatcctctctttaaaccaaaattctcagag  4646800                   <----------DOF2                   <---------DAG2               ------>ZmHOX2a(2)                                                          ------>MYB83              <------ZmHOX2a(2)                                                         <---------MYB111(2)              <---------GLK1(1)                                                         --------->DEAR3(1)             --------->ARR14(2)                                                         --------->AtMYB61             <---------ARR11(3)                                                        --------->ANAC46             <---------ARR14(2)                                                      <---------ALFIN1             --------->ARR11(3)                                                   --------->ANAC46             --------->ARR14(3)                               <------------CBF <---------ZAT14      <            <---------GLK1(1)                 --------->ALFIN1XXXXXXXXXXXXXXXXXXXX>MIR846 ------>MYB46(1)            --------->GLK1(1)       <---------YAB1*TSS   --------->AtLEC2      --------->ZAT14     <-       ---------->DOF2            --------->At4g35610------------>CBF   --------------->AtSPL8    --- ---------DOF2--------->GLK1(1)   <---------At4g35610<-------TEIL --------------->AtSPL3<---------MYB111(1)   acttttacataaagagatctcctttttctgcaaatcagatgattcaatgtgagggttcaatgcaaattgaagtacttgtactatactccacctcccaaat  4646900             -------->P             ------>MYB46(1)             ------>MYB83            --------->MYB55(1)           <---------MYB111(2)           --------->AtMYB61           <---------MYB59           <---------MYB46(2)           <---------MYB111(1)           --------->MYB46(3)                         ----------->GT1        <-----------GT1                             ---------->DOF2   <---------GLK1(2)                   --------->ARR14(2) ---------WOX13(1)           <------------CBF    --------->ANAC58                       <----------DOF2 -----------CBF            <---------YAB1        --------->ANAC58               <-----------GT1 ------>ATHB12             <---------TOE2(3) <----------DOF2    <---------TOE2(3)  <----------DOF2   tgattgattcttaccaacccatgaaatctaagattgaatcaaatttgcttcaagtaaagaaaaattgatgttttagttgttttttcttttctttttcaaa  4647000                                                                                              <------                                                                                              <------                                                                                    <---------AHL20(2)                                                                                   --------->AHL20(1)                                                                                   <---------AHL20(1)                                                                          ---------->DOF2 ---------->ID1                                                                    <---------MYB52(1)  <-----------RAV1(1)        --------->YAB1 <--------HAHB4                        <---------WRKY12      --------->AHL20(2)    <---------AHL20(2) --------->ATHB12                      <---------WRKY45      <---------AHL20(2)   --------->AHL20(2) <---------ATHB12     <<<<<<<<<TBF1     <---------WRKY38(1)  --------->AHL20(2)   gatgaataaatcgtaaccttctgaatcatttagagtcttctcttcttcttcgcatcaattttgtcaacgcgttagtaaaagaaaattaatttgttgcctt  4647100                                                                                     --------->ATHB12                                                                                     <--------ATHB1                                                                                     -------->HAHB4                                                                                    <---------YAB1               ----------->GT1                                                      --------->ICU4             --------->YAB1                                                       --------->YAB1   --------->ZAT2                          <---------WOX13(1)                    --------->ICU4   <---------At4g35610                   --------->ATHB12                       --------->AHL20(1)   <---------ZAT2                       --------->AHL20(2)             <---------SPL7<---------ICU4 <   --------->At4g35610                  <---------AHL20(2)          <---------At5g28300    --------->DOF5.7(2) ---ANAC58  <---------ATHB51    <----------DOF2     <---------YAB1 <-----------GT1<---------ICU4<---- ---ANAC58  <---------ATHB12 <---------MYB52(1)   --------->YAB1<---------ICU4 --------->YAB1   <----   ggtttagctggccaataatgtgatttgattcgttctttgacattaattgaaattagaattgcataagaatcaccgtatgaaaaataatgattcgtttact  4647200                                                                                     <---------ICU4                                                                                     --------->ATHB12                                                                                     --------->ATHB51                --------->ATHB12                                                    --------->ICU4               <---------AHL20(2)                                        <---------TOE2(3)              --------->AHL20(1)                                         <---------YAB1    --------->MYB52(2)                                                 <---------AHL20(2)   <---------YAB1                                                      --------->AHL20(2) --------->YAB1<---------YAB1                                         <---------ATHB12           ---- --------->TOE2(3)  ----------->GT1                                   --------->AHL20(2)         ---- ---------YAB1--------->AHL20(2)                                 --------->TOE2(3)  <---------YAB1 ------DOF2   <---------AHL20(1)                            --------->AHL20(2) <---------At4g35610 -----DAG2   --------->YAB1                                 <---------AHL20(2) --------->At4g35610   ttatgttaattgcaaatataattggataaaaactatatggaagaaaaaaaaacttcgaatatttaaatctcaattaatattagctcattattgtgtttca  4647300                                             <---------YAB1                                        <------MYB83                          --------------->AGL15                      ------->MYC3      ----------->GT1                      ------->MYC2      <------MYB46(1)                      <-------MYC3     <---------DREB2C(2)             <----------DOF2          <----------DOF2 <---------------AGL15                      <------------------------ANAC81     ---------->DOF2  <-------MYC2     <---------DEAR3(1)         <----------DOF2         <----------DOF2 ----->ANAC46      <---------ALFIN1    <---------MYB46(3)    <----------DOF2          <-----------GT1 ----->ZAT6     <---------ZAT18    <------ZmHOX2a(1)        <---------DAG2  <----------DOF2         -   cactagttaaagcttttgtccacacatgctccatataggagtcggtgattatacaactaaaaccttttcttttcttttcttttttgtttttcctttggct  4647400  Previous    Next  AGI:  At1g13580.1    Description:  LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3). Identical to LAG1 longevity assurance homolog 3 [Arabidopsis Thaliana] (GB:Q6NQI8;GB:Q9FZ69;GB:Q9LMZ0); similar to LAG1 (Longevity assurance gene 1) [Arabidopsis thaliana] (TAIR:AT3G25540.1); similar to Lag1 longevity assurance-like 3 [Brassica rapa] (GB:ABV89617.1); contains InterPro domain TRAM, LAG1 and CLN8 homology; (InterPro:IPR006634); contains InterPro domain Longevity-assurance protein (LAG1); (InterPro:IPR005547) Range:  from: 4644697    to: 4646850    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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