Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <---------ICU4           --------->ANAC58                                                          --------->ATHB51   --------->ARR14(2)         <---------ALFIN1                                       -------->ATHB1   <---------ARR14(2)        <---------ZAT14                                        --------->ICU4   ------->TEIL              --------->ZAT14                <---------ALFIN1        <---------YAB1 -------->ANAC55(2)        --------->ANAC58                 --------->REM1(1)       <---------ATHB51 ---------ANAC55(2)        --------->ANAC58          --------->At4g35610  <---------TOE1(2) ----------------AG      <---------ALFIN1            <---------At4g35610 ------>ZmHOX2a(1) ----ZmHOX2a(1)         ------>ZmHOX2a(2)   --------->TOE1(2)       <---------At4g35610 ->MYB111(2)  --------->CCA1(2)           ------->TEIL  --------->At4g35610   <-----------GT1  ------ ->ALFIN1  --------->ANAC58--------->ANAC46 --------->TOE2(2)       --------->At4g35610     ---------   ggacgtatttggcaagataagagtgatccactccactgtatttgtacctatgaagagctgctacaccatgagctcctatgtaacccattattgtctatca  4641700                                 ------>ZmHOX2a(1)                              <---------DAG2                                --------->TOE2(3)                           <---------ZAT14                             <---------ARR14(2)                             --------->ZAT18                             <---------ARR11(3)                             <---------ZAT18                             --------->ARR14(2)                      ------>ZmHOX2a(2)                             --------->ARR11(3)                    --------->ARR11(3)                            --------->GLK1(1)                      <---------ARR11(3)                            <---------GLK1(1)                      --------->ARR14(2)                           <---------ARR11(3)                      <---------ARR14(2)                           --------->ARR11(3)                      ------->TEIL <----------DOF2                           --------->ARR14(2)                      <---------AGP1 --->YAB1      ----------->RAV1(1)    --------->YAB1      ---------->DOF2   --------->ZAT14 >WOX13(1)    <----------ID1--------->RVE1(1)       --------->YAB1<---------CCA1(2) --------->YAB1   cactgattcaaacaaaacaacaaaaacaagatatcctcaattctaatcccacaatgacattaaagcatggatcttgagagcacttttcatattccctaat  4641800                                                                                                   --                                                                                    --------->GLK1(2)                                                                                   <---------GLK1(2)<                                                                                   --------->ARR14(2)                        <-----------HVH21                                          <---------ARR14(2)                       --------->ANAC46                                   --------->CCA1(2)       <--                --------->YAB1                                           <---------ARR14(2)      <---        <---------AHL20(1)                                               --------->ARR14(2)      ----        --------->AHL20(1)                                        <----------DOF2----------->ARR10<--        <---------AHL20(2)                                   --------->At5g28300<--------P       <---        --------->AHL20(2)                                  ----------->GT1   <---------ANAC46   ----   <---------ATHB12<---------ARR14(2)           --------->HSFB2a(2)   --------->HSFB2a(2)       <----   gctaaatcaataaaatgagcataacccgtcaacaaaaaaaaaaaactttgctcgaactgagacagtgactttcgagatttgggtagattctgaaatttag  4641900                                                   --------->At5g28300                                                   <------NtERF2                                                <------NtERF2                                               ------>NtERF2      --------------->AGL15                   <---------DEAR3(1) ---->ZmHOX2a(2)                              --------->ALFIN1 ----------DOF2                              <---------MYB52(1) -------RVE1(1)                            <---------DEAR3(1)  <-------TEIL ------ARR11(3)                            <---------MYB46(3) --------->CCA1(2) ----->ARR11(3)                           <---------LBD16    <---------ARR14(2) ----ZmHOX2a(2)                           --------->SPL7     --------->ARR14(2) ------AGP1                     --------->TOE1(2) ----------->GT1     <----------DOF2 ----->AGP1            --------->CCA1(2)<---------SPL7       --------->ARR11(1)                  ---- -----CCA1(2)    <------ZmHOX2a(2) <---------YAB1<---------ANAC46  ------->TEIL           ---------->DOF2   atcttttgctacaaattggatcaagagacgagtacttacgatggtccggtggcggtaaaatcagatacgagcctttctcgtctcgagtgtctgaaagaag  4642000                                                                                                    <                                                                                          --------->LBD16                                                                                         <---------ANAC46                                                                                        <---------LBD16                                                                                     <---------ANAC58                                                                                     <---------ANAC58                                                                                   <---------ARR14(2)                                        <---------ARR14(2)                         --------->ARR14(2)                                        --------->MYB52(1)                      <---------ANAC58    <                                    <------NtERF2               ---------->DOF2 <---------ANAC46  <--                                    --------->RAP2.3(1)         =====================================                                  <---------DEAR3(1)        --------->ANAC58    <---------ANAC58 ----        --------->ARR14(2)       --------->At4g35610        --------->ANAC58<----------DOF2   ------- ------>DOF2                     <---------At4g35610 <------ZmHOX2a(1)      =========================   aaagagacagtaacctctcacttgcccctatagagagcggcgaaacgggacgagaggaccagaagcaaaaggagagggctttgcgtttcttccgcgttcc  4642100             <---------TOE2(3)    --------->ALFIN1   <-------MYC2   ------->MYC3   <-------MYC4   <-------MYC3   ------->MYC4   ------->MYC2  <---------TGA1a  --------->TGA1a                                                      <---------AHL20(1)  --------->ANAC55(2)                                                  <---------ARR11(3)           <  =================================bZIP_DOF                            --------->AHL20(1)           -  =================================bZIP_DOF                            --------->ARR11(3)           <  <---------O2                                                        --------->RVE1(1)     ---------  --------->O2                                                      ------>MYB46(1)      ------>NtERF2  <---------ANAC55(2)                                               ------>MYB83        ------->GAMYB ------------>OsbHLH66                                           --------->MYB46(3)     <---------ETT(1) *TSS       <-----------GT1                                     -------->P<----------DOF2<---------RAP2.6(3) ------------OsbHLH66        <----------DOF2                    ------>MYB46(1)         --------->RAP2.3(3) ---------ALFIN1        <----------DOF2             <---------ICU4------->GAMYB         --------->DREB2C(2) -------ALFIN1       <-----------GT1          <-----------GT1 --------->AtMYB61         --------->At1g77200 ===========bZIP_DOF ---------->ID1        <---------ICU4    --------->MYB46(3)         --------->DEAR3(1) ----->ANAC46<---------TOE1(3)            <---------YAB1   --------->ANAC46           <---------At4g35610 -->SPL7    <---------DOF5.7(2)  ---------->ID1------------>CBF ------>MYB83          --------->At4g35610 ===========bZIP_DOF<-----------GT1    <---------YAB1  <-----------GT1--------->CCA1(1) --------->RAP2.6(2)   ccacacgtgtgtgttaacgatttttccttttctttgtttttttgattatttcaatttttacaaaccaaccaaatatctttctttctacagccgacaacat  4642200                                              ------>MYB83                                              ------>MYB46(1)                                            --------->TOE1(2)     --------->YAB1                         --------->TOE2(2)         --------->LBD16    <---------YAB1                          <---------MYB59         ================================= --------->AHL20(2)                    <---------MYB52(2)           <-----------------AGL2 <---------AHL20(2)                 --------->AHL20(2)              ----------------->AGL1 ---------AHL20(1)                ----------->GT1                   ----------------->AGL3 -------->AHL20(2)                --------->AtLEC2               <----------DOF2 ---------AHL20(2)            <------ZmHOX2a(1)    --------------------->WRI1                 <------ -->RAV1(1)              --------->ATHB12<-----------GT1         <---------DAG2--------->ANAC46 <----   aataaaattatagttttgagtctaaattgataggacatgtaaataacctactaatttgttagcatcactttccgaatttagaccccataatgcatattac  4642300                                                                                     <---------ZAT18                                                                            <---------WRKY12                                                                            <---------WRKY45                                                                            <---------WRKY38(1)                                                                           <<<<<<<<<<WRKY6                               --------->ANAC46                            <<<<<<<<<<WRKY43                               --------->ANAC58                            --------->WRKY18(1)                             <---------ALFIN1                              <<<<<<<<<<WRKY11        <-                       --------->ZAT6                                      <<<<<<<<<<WRKY26      <---                     --------->YAB1                                --------->ARR11(3)--------->ZAT14                    <---------YAB1                             <-----------GT1       <---------ZAT14                  --------->YAB1                          <----------DOF2  <<<<<<<<<<WRKY38      ---- =================================================================================MADS_MADS ------>ZmHOX2a(1) -----GT1        ----------->GT1                     <-----------GT1<---------YAB1   --------->ZAT18 -----YAB1       <---------YAB1--------->ANAC58   ----------->GT1 <---------------AGL15   -----------   aatttgaattttagttagaatgataatactaacacaccaattcaagtacaagtagtaactcttttttactatctttggtcaactaagttcactcctgcag  4642400                                     ------>ZmHOX2a(1)                              <---------AHL20(2)                             --------->AHL20(1) ------TEIL               --------->YAB1----------->RAV1(1)                         <xxxxxxxxxxxxxxxxsmallRNA(i) ------ARR14(2)           <---------AHL20(2)                                    ---------->DOF2 ----->ARR14(2)           --------->AHL20(2)          --------->AtMYB61 --------->YAB1 >RAV1(2)     <---------YAB1 <---------AHL20(1)<-------TEIL            <---------YAB1              --   attcaacagttttgttatctttccacaattatatatttcctccaacagattcaacaccaaaacatgtttagacatgataacagaaagagagagagggaga  4642500                                                                   <---------GLK1(1)                                                                  --------->ARR14(2)                                                              ------->MYC2                                                              <-------MYC2                                                              ------->MYC3                                                              ------->MYC4                                                              ------->PIF5                                                              <-------MYC3                                                              <-------PIF5                                                              <-------MYC4                                                             <---------ANAC46                                                  <---------HSFB2a(2)----------->RAV1(2)                                              --------->At4g35610 <---------ARR14(2)                                              --------->ZAT2 --------->O2                                              <---------ZAT2 <---------ANAC55(2)                                         --------->ZAT2      <---------TGA1a                                         <---------ZAT2      --------->TGA1a                                         --------->At4g35610 <---------O2                                         <---------At4g35610<-----------------------TaNAC69(2)                   <---------GLK1(1)    <-----------ARR10--------->CCA1(2)                <---------ARR14(2)               --------->YAB1          <------ZmHOX2a(1) ----------------->PIF3(1)        --------->ARR14(2) ------->CCA1(2)   --------->GLK1(1) --------->ALFIN1<------ZmHOX2a(1)                   <---------CCA1(2)   gagatggagaaggggaatcagatttcagtcttgaaggaagaggagctgagctcgaggagagacacgtggatacctgagcaattcgataaccatatccatt  4642600  Previous    Next  AGI:  At1g13560.1    Description:  AAPT1 (AMINOALCOHOLPHOSPHOTRANSFERASE 1); phosphatidyltransferase. similar to AAPT2 (AMINOALCOHOLPHOSPHOTRANSFERASE), phosphatidyltransferase [Arabidopsis thaliana] (TAIR:AT3G25585.4); similar to AAPT2 (AMINOALCOHOLPHOSPHOTRANSFERASE), phosphatidyltransferase [Arabidopsis thaliana] (TAIR:AT3G25585.1); similar to AAPT2 (AMINOALCOHOLPHOSPHOTRANSFERASE), phosphatidyltransferase [Arabidopsis thaliana] (TAIR:AT3G25585.2); similar to aminoalcoholphosphotransferase [Brassica rapa] (GB:AAB53764.1); similar to aminoalcoholphosphotransferase [Brassica rapa subsp. pekinensis] (GB:AAL46934.3); similar to aminoalcoholphosphotransferase [Brassica rapa] (GB Range:  from: 4638511    to: 4642101    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g13570.1    Description:  F-box family protein. Identical to F-box/FBD/LRR-repeat protein At1g13570 [Arabidopsis Thaliana] (GB:Q9FZ70;GB:Q7FLD2); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G56370.1); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G56370.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO15368.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain FBD (InterPro:IPR013596); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 4642343    to: 4644419    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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