Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                                -----                                                                                               ------                                                                                               ------                                     --------->ANAC58                                        <-------                                     --------->ANAC58                                        <-------                                    <-------TEIL                                             --------                                   --------->ARR14(1)                                        --------                                   --------->CCA1(2)                             <---------MYB46(3)                                  --------->ARR11(1)                            <---------DEAR3(1) <-                                  <---------ARR14(2)               ------->TEIL --------->ALFIN1<----                                  --------->ARR14(2)            <---------MYB52(2)          <------ZmHOX2a(1)                            <---------ARR14(2)                --------->MYB52(1)<---------AtMYB61----                            --------->ARR14(2)            >>>>>>>>>TBF1   ------->TEIL<---------YAB1   aacaaaaattcagataaaactattaactcaaatccagatacgaactagtatcgaagagaagaagaaacgaaccatgtactcggtggtgatgaaaggatcg  4610200                                                           --------->HSFC1(2)    --------->DEAR3(1)                             --------->MYB46(3) ---->TOE1(3)                                    ------>MYB46(1) ---->TOE2(3)                                    ------>MYB83 >ZmHOX2a(2)                                     --------->MYB52(1)   --------->TOE2(3) ----->GT1                                     ------->GAMYB          --------->TOE1(3) --ARR14(2)                                    --------->AtMYB61 --------->LBD16 --ARR11(3)                                   --------->MYB46(3)--------->HSFB2a(2) ->ARR11(3)                                  --------->ANAC58   --------->ANAC46            <-------- ->ARR14(2)                                  -------->P    --------->HSFB2a(1)    <-------TEIL --------DOF5.7(2)                           --------->ANAC58   <---------HSFB2a(2)         <-------- ---GAMYB --------->At4g35610            --------->ANAC58 --------->ARR14(2)     --------->CCA1(2) ----->DOF5.7(2)                         --------->ANAC58<---------GLK1(2) --------->ANAC46 ---------   ttaacagcgacgagctcaacatcatccctctgaagaacaactctagcaaccaaacgaccgattcttccgaaaccttcacgaagattcaaaactcagcttc  4610300                       --------->MYB46(3)                                       ------>ZmHOX2a(2)   <------ZmHOX2a(2) ------>MYB83                                        --------->GLK1(2)  --------->AGP1   <---------MYB59                                    <---------YAB1      --------->At4g35610  --------->ARR14(2) ------>MYB46(1)                           <---------MYB52(1)     <-----------HVH21  <---------ARR14(2) --------->MYB52(1)                       <-------GAMYB   --------->ARR11(3) -ZAT2   <---------ATHB12                                  <---------At5g28300<---------ARR11(3) -At4g35610        --------->AtMYB61                    --------->ANAC58<---------GLK1(2) <---------ZAT2 >At4g35610 <---------ANAC55(2)    --------->HSFB2a(2)  --------->ANAC58<---------ARR14(2)<---------At4g35610   tacagatccaaatcacttaaacctaaccaaaaaacttatggaattcgataagaaaaacactcaccgttgattccgattctgatcttcttgtcagctacac  4610400                                                                              --------->HSFC1(2)                                                                              --------->At4g35610                                                             --------->ARR14(2)                                                             <---------ARR14(2)    <-----------------AGL1                                  ---------->DOF2    <---------ARR14(2)       <---------HSFC1(2)            <------ZmHOX2a(2)    ------->GAMYB       --------->ARR14(2)      <-----------ARR10         <---------YAB1--------->DAG2       ---------->DOF2 --------->At4g35610    <-----------------AG       <-----------GT1---------->DOF2       <---------AHL20(2)<------ZmHOX2a(2)   -------->P    <---------ICU4<-------TEIL  --------->ANAC46     <---------GLK1(2)       --------->GLK1(2)   aaaccaaaattacgatcagattcaaaaagtatcaacgaaagaacaataaatcgaagaatcgcagatcaacaagagcgagaagcttacccattttgcgaaa  4610500                                                                                   ----------->GT1                                                                                  <---------TOE1(3)                                                                             --------->ARR14(2)                                                                            <------ZmHOX2a(1)                                                                      <------MYB83<---------TOE2(3)                                                                      <---------ANAC46                                                                      <------MYB46(1)                                                                     <---------AtMYB61                                        ----------->GT1              --------->MYB46(2)     ---------                 <---------At4g35610   <XXXXXXXXXXXXXXXXXXXXMIR4239  <---------MYB46(3)   <---------AHL20(2)   <------ZmHOX2a(2) --------->ARR11(3)--------->GLK1(2)     --------->ALFIN1<---------ARR14(2)   ttgagatcgagagagatttagatgatatcgagagagaagagaatgtgaaaatagtgagtgagggtttgggtttggtgaggatttagggttatttaaaaga  4610600                                              <---------RVE1(1)                                     -                                              <---------CCA1(1)                                     <                                             --------->ARR11(3)                          <---------TOE2(3)                                             <---------ARR11(3)                          <---------YAB1                                            *TSS    <---------ANAC58                   --------->AHL20(2)                     ----------->GT1    <---------ANAC46                               <---------AHL20(2)              <---------YAB1          <---------MYB46(3)       ----------->GT1        --------->AHL20(2)           <---------YAB1            --------->ALFIN1         --------->DAG2    <-----------GT1     < >>>>>>>>>TBF1----------->GT1    ------>ZmHOX2a(2)  <---------ANAC58           <-------TEIL        <- ->DOF2    --------->ICU4    <---------YAB1----------->ARR10---------->DOF2----------->ARR10 <-------   gaagaagaacgtgatgatgaaaattgaaaatatgatcgagtggctgagattttttcttgggaaaaaggctaatagattagattcactaattaatattact  4610700           <----------DOF2      <----------DOF2      <---------DAG2   <-----------GT1 -------------->AtSPL8              --------->MYB46(3)                                    --------->ARR14(2) ---------------AtSPL3           <-----------GT1     <------ZmHOX2a(1)               <-------GAMYB ---------------AtSPL8   <---------At5g28300        <------MYB83              --------->MYB52(1) ---- -----------CBF<----------DOF2<---------ICU4        <------MYB46(1)  <---------LBD16<---------MYB46(3) ----GT1<-----------GT1 <-----------GT1           <--------P    --------->ATHB12   <---------ANAC46<-   atattgtactttactttctttcttatttaccatttttacccatcgtttatgggtaggattaagaactgatttggggaaactaatggcgcttggattcacg  4610800                                                        --------->ANAC58                                                        --------->ANAC55(1)                                                        --------->ANAC46                                                     <---------ZAT14                                                     <---------ZAT18             --------->ARR14(2)                      --------->ZAT14             <---------ARR14(2)                      --------->ABI4(2)            <----------TaMYB80                     <-------PIF5            <---------KAN4(1)                      ------->PIF5            --------->KAN4(1)                     <---------ATERF1(1)                 --------->ARR11(3)            <---------HSFB2a(1)                   --------->At4g35610        <---------ARR14(2)            <---------HSFC1(2)                    <---------DEAR3(2)         <---------ARR11(3)            --------->HSFB2a(1)                  <---------DEAR3(1)          --------->ARR14(2)           <---------KAN4(2)                     <---------MYB46(3)          <---------GLK1(2)   >>>>           ---------->TaMYB80               <---------ATERF1(1)              --------->ARR11(3) ----- ----->ANAC46--------->KAN4(2)              --------->ALFIN1  --------->RAP2.6(3)     <---------ARR11(3) ----------RAV1(2)                   ------>ZmHOX2a(1)  --------->ANAC58 <---------At4g35610 <-------   cgcaggctgatggaatattcgaggtttaatactctaatcctatgggctgggccggtgcacgcaagactgcaacgtagcagattttgtatatattcctttt  4610900                                                                                                    <                                                          --------->ARR11(3)                   ------                                                          <---------ARR11(3)                  -------                                             <---------AHL20(2)                               -------                                             --------->AHL20(2)       <-----------RAV1(1)  <---------                                            --------->AHL20(2)       <---------YAB1    --------->ATHB51      <---------ATHB12                   <---------AHL20(2)        -------->ATHB1      <---------ICU4 >>>>>WRKY18                         <----------DOF2      <---------GLK1(2)         --------->TOE2(3) ------>HVH21                      ---------->ID1   --------->YAB1 --------->ATHB51 --------->TOE1(3) ---DOF2   <----------DOF2        <-----------GT1  <---------YAB1 <---------YAB1    --------->YAB1  <   gacagccaatgagctttgccaatagccaaatttgtttttctttttatttaattttcataagattttgtattattgttgttgtcaaaccataattttcctt  4611000                                                          <---------ALFIN1                                                        >>>>>>>>>>>>>>>>>LFY                                                   <---------MYB52(2)                                                  --------->ANAC58                                                  ----------->GT1                                                  --------->ANAC46                                                  --------->ANAC55(1)                                                  --------->ANAC55(2)                       <--------                                                  --------->ANAC58                       ------------                                                  <---------ANAC55(2)                   -------------                                           <---------ANAC58                             <------------                                           <---------ANAC55(2)                        <-----------GT1 ---------ICU4                             --------->ANAC55(2)                     <---------YAB1 >ZmHOX2a(1)                               --------->ANAC46                    <---------ANAC58 -->TOE1(3)                                <---------ANAC46                    <---------ANAC58  ---- -->TOE2(3)--------->MYB52(1)      <---------AHL20(2)  --------->ZAT6        ------->TEIL<----------- --GT1---------->DOF2              --------->AHL20(2)<-----------GT1         --------->ARR11(3) ----- ---------AHL20(2)     <---------ZAT18     <---------ANAC58                 <---------CCA1(2)--------   aataaatccaaagtaactgcaatagtatgctcattttttaattttgcgtaacaagtaacaccactgtcttctatacatgtatcttgtgataccattcatg  4611100  Previous    Next  AGI:  At1g13440.1    Description:  GAPC-2; glyceraldehyde-3-phosphate dehydrogenase. Identical to Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (GAPC) [Arabidopsis Thaliana] (GB:P25858;GB:Q42352;GB:Q9M8W8); similar to GAPC (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT), glyceraldehyde-3-phosphate dehydrogenase [Arabidopsis thaliana] (TAIR:AT3G04120.1); similar to Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (GB:P04796); contains InterPro domain Glyceraldehyde-3-phosphate dehydrogenase, type I; (InterPro:IPR006424); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Glyceraldehyde 3-phosphate dehydrogenase; (InterPro:IPR0 Range:  from: 4608193    to: 4610644    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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