Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           ---------->DOF2     --------->ANAC58     --------->ANAC46                                       --------->ARR11(3)     --------->ANAC58                                       <-----------ARR10                    ----   --------->MYB46(3)                  <----------DOF2      <---------ARR11(3)                <------ ------ICU4       <---------YAB1      --------->TOE2(3)    <---------GLK1(2)        --------->ANAC46 ----->YAB1      <-------GAMYB --------->AHL20(2)   <---------GLK1(1)               --------->ANAC55(2) -----ATHB12    <---------MYB46(3) <-----------GT1  --------->GLK1(1)  --------->LBD16 <---------ICU4 -->WOX13(1)   <--------P  --------->YAB1      <------ZmHOX2a(1)       ------>ZmHOX2a(1)      -------   catcaacaagcaaaagggttgttattgaatcatatatatacctttgtgaggatgaaatccaaaatctcacttcctgaattcgattcacataattccatct  4593300                                  <----------DOF2                                 <---------ANAC58                                      <---------ANAC58                                 <---------ANAC58                                      <---------ANAC58                              <---------WOX13(1)       --------->DAG2            <-----------ARR10---                            --------->ATHB12          ---------->DOF2        --------->DAG2 <-------- ----->At4g35610           <---------YAB1       --------->TOE2(3)           ---------->DOF2 --------- ---At4g35610        --------->AHL20(2)  --------->ATHB12         <---------DAG2 --------->ARR11(3) ---->RAV1(2)        <---------ATHB12 --------->ANAC55(2)         <----------DOF2<---------ARR11(3)   gatgactacaaaatcaaaaaccaataaatctgattgcttcaagtgatttgcctcaaaaaagttttgaactttattacaaaaagtatcttacttgagttgc  4593400                                                                                           --------->ARR14(2)                                                                                           <---------ARR14(2)                                                                                        <---------ANAC58                                                                                        <---------ANAC58                                                                                        <---------ANAC46                                                                                       <------NtERF2                                                                                      <---------RRTF1(1)                                                                                      ------>NtERF2                                                                                      <---------ORA47(2)                                                                                      <---------ATERF1(1)                                                                                      <---------DEAR4(2)                                                                                      <---------ERF1                                                                                      <---------RAP2.3(1)                                                                  <---------CCA1(2)  <---------RAP2.3(3)                                                                  <------NtERF2      <---------RAP2.3(2)                                                                <---------ANAC58     --------->DEAR3(1)                                                                <---------DEAR3(1)   <---------RRTF1(3)                                                                <---------ANAC58     <---------DEAR3(1)                                                             --------->ANAC46       <---------ABI4(1)          --------->HSFB2a(2)          --------->ANAC46     <---------LBD16 --------->YAB1 <---------          <---------HSFB2a(2)       -------->P              <---------At5g28300 --------->MYB52(1)        <------ZmHOX2a(2)     --------->ZAT18              --------->MYB52(1)  --------->ARR14(2) ------->GAMYB       <---------YAB1 ------>MYB46(1) ==============================HOX2a_HOX2a ------>MYB52(1)     --------->ICU4 ------>MYB83    <------ZmHOX2a(1)      ========================== -At4g35610        ----------->GT1 ----------->RAV1(1)    <---------ATHB12 <------ZmHOX2a(2)        < >At4g35610       --------->ALFIN1--------->AtMYB61<----------ID1------>NtERF2 <---------ARR14(2)----   caacggagagatcgagaagagtggtgattaagagcaccaacacgacgaggtttaggacaaatcacggcgtctctccgatcagaaacggcggcgtttctcc  4593500                                                 <--------P                                                <---------ANAC58                                                <-------GAMYB                                            <----------DOF2---------->DOF2                                 <---------MYB46(3)--------->At4g35610        ---------->DOF2  <-----                               --------->At4g35610 <---------At4g35610--------->YAB1           ------ --ARR10---------->DOF2        <---------At4g35610<---------MYB46(3) <---------ATHB12 ----------->GT1 ===HOX2a_HOX2a                <---------ZAT2   <---------ANAC58--------->GLK1(2)   ---------->DOF2 ---------CCA1(2)              --------->ZAT2  <---------MYB46(3)  --------->WOX13(1)--------->DAG2 -->ZmHOX2a(1)   <-----------RAV1(1)      <---------YAB1<----------DOF2    --------->TOE2(3) <-------   tcatctcttcaaaagcgttttgttggattccacagctgttcatcatctttggttgctgcttcaaagaatcaatcaaaccacaaagaaaaagtgaattacg  4593600                                                                                                    <                                                                                                   --                                                                                                   <-                                                                                   <---------ANAC58<-                                                                                   --------->ANAC55(2)                                                                                   <---------ANAC58--                                                                                   <---------ANAC55(1)                                                                                   <---------ANAC55(2)                                                                                 <---------DOF5.7(2)-                                                                                *TSS               --                                                                              ----------->GT1      <-                                                                              --------->YAB1       --                                             ---------->DOF2             <---------WRKY38(1)      <--                                      <---------AHL20(2)                 <---------WRKY12         ---                                   --------->AHL20(1)                 ----------->GT1            ----      >>>>>>>>>TBF1                <---------AHL20(1)                 <---------MYB46(3)  <---------ANAC58 ----ANAC55(2)                    --------->AHL20(2)                 --------->ALFIN1     <---------ANAC58 --->ANAC55(2)                --------->AHL20(2)                  --------->ALFIN1 <---------ANAC46<- ----GT1      ----------->GT1 <---------AHL20(2)  --------->CCA1(2)  <---------AtMYB61 <---------CCA1(2)   agattgaagaagaagatggcaaaaaatgatatataaatatataaaaaaaaagataagagaagagagaagaggtggtcaaatggtaacgtgtttcttatgg  4593700 ------>ZmHOX2a(2) ------ZmHOX2a(2) ------->ARR14(3)              <---------TOE2(3)                                         ----------->HVH21 --------ARR14(2)              <---------TOE1(3)                                       --------->TGA1a --------AGP1               <---------AHL20(2)                                         <---------O2 ------->AGP1             <---------YAB1                                               <---------TGA1a -------->CCA1(2)        <---------AHL20(2)   <---------AHL20(2)                       --------->O2 ------->ARR14(2)      <---------AHL20(2)  <---------AHL20(2)                          ============== --------ARR14(3)   <---------AHL20(2)    --------->AHL20(2)              --------->ANAC58 ------->ARR11(3)   --------->AHL20(2)    <---------AHL20(2)          --------->YAB1 <---------ALFIN1 -------GLK1(1)     --------->AHL20(1) --------->AHL20(2)    --------->YAB1 <------ZmHOX2a(1) ------>GLK1(1)     <---------AHL20(1)<---------YAB1    ----------->GT1   --------->ANAC58      <---- ------->ARR10    <---------YAB1  <--------P  --------->AHL20(2) ------------>CBF   --------->ZAT18 --------ARR11(3)--------->AHL20(2)<-------TEIL   <---------ICU4--------->YAB1      <---------ZAT18<-   agatctggtcataagagaatattatattattttaaggttgattatttattaattaagacagaaaaataacaatggtaaggaattagcccacttgacaaaa  4593800                      --------->ANAC58                      --------->ANAC58                      --------->ANAC55(1)                      --------->ANAC55(2)                <---------AHL20(2)             <---------AHL20(2)                                                     <----------DOF2 -             --------->AHL20(2)      --------->YAB1       --------->YAB1            --------------->AGL15          <---------AHL20(1)     ====================================================================          --------->ARR11(3)     --------------->AGL15   <---------YAB1  <---------RVE1(1)       <---          --------->AHL20(1)     <---------------AGL15   <------ZmHOX2a(2)          <---------------AGL15         <---------AHL20(2)     ====================================================================MADS_MADS     --------->AHL20(2)    --------->ICU4               <---------ARR11(3)          =================  <----------DOF2     <---------ANAC55(2)        --------->bZIP60(1)    --------->ARR11(3)<---------- ============bZIP_DOF --------->ANAC46           <---------bZIP60(1)    <---------GLK1(2) =========== -----ICU4<---------ARR11(3)    ----------------->AGL3  --------->ARR11(3)    <-----------GT1-------- ----------GT1  --------->AHL20(2)  <---------YAB1    --------->ICU4    <---------ARR11(3)-----------   attacttttaaatatttttttaatacgtaatgtttcccattatagtgaatgatgtcaagatcatagtggagacagatttttttcttctttttcaagaata  4593900          <---------------AGL15          --------------->AGL15         --------->MYB46(3)  ---------->DOF2 -------->ZAT14        <---------YAB1 =========================MADS_MADS                      --------->ATHB12 ------ANAC55(2)   --------->ARR11(3)           ----------->HVH21 =========================MADS_MADS     --------->YAB1  <---------YAB1       <------ZmHOX2a(1) -----AGL15        <---------GLK1(2)    --------->AHL20(2)           --------->ZAT6 ==========================MADS_MADS    <---------AHL20(2)      --------->YAB1--------->ARR11(3) ->YAB1  ----------------->AGL3     --------->ICU4      --------->ICU4   ---------->DOF2 ---->AGL15    ---------->DOF2--------->DAG2  ----------->GT1 <---------TOE2(3)<------ZmHOX2a(2)   agtaaactctaaccaaaaaaagattatgagaaaaagtcttaattaaaacagtgacaagatgattaagaataacacaaaaggatcaagaattcgtagaaaa  4594000                                                                             --------->LBD16                                                                           ------>ZmHOX2a(2)                                                                          <------ZmHOX2a(2)                                                            <---------MYB46(3)                                                  ------>ZmHOX2a(2)       --------->CCA1(2)                                                 <------ZmHOX2a(2)       <---------ARR11(3)                                                <---------ARR14(3)       --------->ARR14(2)                                                --------->GLK1(2)        <---------ARR14(2)                                                <---------ARR11(3)       --------->AGP1                                                --------->ARR14(3)       <---------AGP1                                                <---------ARR14(2)   ------>ZmHOX2a(2)                                                --------->ARR14(2)  --------->CCA1(2)                                                --------->ARR11(3)  <------ZmHOX2a(2)                                               <------ZmHOX2a(1)   --------->ARR11(3)                     --------->AHL20(2)        ==================================HOX2a_HOX2a                     --------->YAB1            =============================HOX2a_HOX2a                  --------->YAB1               ===================================HOX2a_HOX2a        <------ZmHOX2a(2)                      ============================HOX2a_HOX2a      <---------At4g35610                     <---------HSFC1(2)   --------->AGP1 <-------TEIL      --------->At4g35610                     --------->HSFC1(2)   <---------ARR11(3)   attgtttcagatcaaaatactaataaaaatcaaaaacacaaaccaagaaggatcttgagagattgttgagatctagatccgagattcaaaagaattgaga  4594100                                                                                          ---------->DOF2                                                                                       ------>ZmHOX2a(2)                                                                                      <------ZmHOX2a(2)                                                                                      --------->CCA1(2)                                                                                      --------->At4g35610                                                                                     <---------ARR14(2)                                                      --------->O2                   <---------ARR11(3)                                        <----------DOF2                              --------->ARR11(3)                                       <---------ANAC46       --------->At4g35610    --------->AGP1                                       <---------ANAC58    <---------At4g35610       --------->ARR14(2)                                       <---------ANAC58    --------->At4g35610       <---------AGP1                 ---------->DOF2  <---------ANAC58    --------->ANAC55(2)            ----------------             ---------->DOF2      <---------ANAC58    --------->ANAC46              <---------GLK1(1)     ----------->HVH21        --------->HSFC1(2)  <----------DOF2                   --------->GLK1(1)   ----------------->AGL1     <---------HSFC1(2)--------->ZAT18            >>>>>>>>>TBF1----------->HVH21   ----------->RAV1(2)--------->At4g35610       <---------ZAT18 ------------------------>ANAC81   gagatacctgaaggtgaaagaaagagcagagatggttcttggcttgtttgtgctctacgtgagcagaagaaacagaagaagaagagagatctgaaagaga  4594200  Previous    Next  AGI:  At1g13390.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G68490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42143.1) Range:  from: 4592826    to: 4593680    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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